RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 CDH11P55287 796 aa11.1□□□□□ -0.63
PCDHGA8-201ENST00000398604 TBPL1P62380 186 aa11.1□□□□□ -0.63
PCDHGA8-201ENST00000398604 CSTF1Q05048 431 aaKnown RBP11.1□□□□□ -0.63
PCDHGA8-201ENST00000398604 MEP1AQ16819 746 aa11.1□□□□□ -0.63
PCDHGA8-201ENST00000398604 PDCD4Q53EL6 469 aaKnown RBP11.1□□□□□ -0.63
PCDHGA8-201ENST00000398604 ZNF789Q5FWF6 425 aa11.1□□□□□ -0.63
PCDHGA8-201ENST00000398604 TMEM225Q6GV28 225 aa11.1□□□□□ -0.63
PCDHGA8-201ENST00000398604 FIGNL1Q6PIW4 674 aa11.1□□□□□ -0.63
PCDHGA8-201ENST00000398604 SYVN1Q86TM6 617 aa11.1□□□□□ -0.63
PCDHGA8-201ENST00000398604 YIPF7Q8N8F6 280 aa11.1□□□□□ -0.63
PCDHGA8-201ENST00000398604 ENDOVQ8N8Q3 282 aaKnown RBP11.1□□□□□ -0.63
PCDHGA8-201ENST00000398604 DMRTB1Q96MA1 342 aa11.1□□□□□ -0.63
PCDHGA8-201ENST00000398604 DPH2Q9BQC3 489 aaPredicted RBP11.1□□□□□ -0.63
PCDHGA8-201ENST00000398604 IFT46Q9NQC8 304 aa11.1□□□□□ -0.63
PCDHGA8-201ENST00000398604 FTSJ1Q9UET6 329 aa11.1□□□□□ -0.63
PCDHGA8-201ENST00000398604 FKBP7Q9Y680 259 aa11.1□□□□□ -0.63
PCDHGA8-201ENST00000398604 FAM221BA6H8Z2 402 aa11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 LDOC1O95751 146 aaPredicted RBP11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 PDYNP01213 254 aa11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 RPLP0P05388 317 aaKnown RBP11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 BCKDHAP12694 445 aa11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 BPIP17213 487 aa11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 HSD11B1P28845 292 aa11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 ARHGDIBP52566 201 aa11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 AP2S1P53680 142 aaPredicted RBP11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 CATSPEREQ5SY80 951 aa11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 FAM83CQ9BQN1 747 aa11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 DEFB126Q9BYW3 111 aa11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 LIN28AQ9H9Z2 209 aaKnown RBP11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 DZANK1Q9NVP4 752 aa11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 MBLAC1A4D2B0 266 aaPredicted RBP11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 OR52A4PA6NMU1 304 aa11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 OR2B3O76000 313 aa11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 T-ENOLP0DO92 83 aa11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 GP1BBP13224 206 aa11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 EDNRAP25101 427 aa11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 HMGCLP35914 325 aa11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 RAB33AQ14088 237 aa11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 ADNP2Q6IQ32 1131 aa11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 SCD5Q86SK9 330 aa11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 FOXRED2Q8IWF2 684 aa11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 RASGEF1AQ8N9B8 481 aa11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 FBXL20Q96IG2 436 aa11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 SLC17A9Q9BYT1 436 aa11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 ANKRA2Q9H9E1 313 aa11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 FAM120CQ9NX05 1096 aaKnown RBP11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 GPR34Q9UPC5 381 aa11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 ZNF99A8MXY4 864 aaPredicted RBP11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 CLDN25C9JDP6 229 aa11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 NPIPA5E9PKD4 350 aa11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 SLC16A8O95907 504 aa11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 MRPL3P09001 348 aaKnown RBP11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 HNRNPA1P09651 372 aaKnown RBP eCLIP11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 ZNF3P17036 446 aa11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 BCAP31P51572 246 aa11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 RHDQ02161 417 aa11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 LRP8Q14114 963 aa11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 FLYWCH1Q4VC44 716 aa11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 TCEAL6Q6IPX3 200 aa11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 REEP3Q6NUK4 255 aa11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 PYURFQ96I23 114 aa11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 WDR77Q9BQA1 342 aaPredicted RBP11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 UCK2Q9BZX2 261 aa11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 IRF2BPLQ9H1B7 796 aa11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 KCNK12Q9HB15 430 aa11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 PDE7BQ9NP56 450 aa11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 FARSBQ9NSD9 589 aaKnown RBP11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 ACTR3BQ9P1U1 418 aa11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 NPIPA1Q9UND3 350 aa11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 CFL2Q9Y281 166 aa11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 NOX1Q9Y5S8 564 aa11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 MAU2Q9Y6X3 613 aa11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 SPTAN1Q13813 2472 aaKnown RBP11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 ANKRD31Q8N7Z5 1873 aa11.09□□□□□ -0.63
PCDHGA8-201ENST00000398604 ADAM12O43184 909 aa11.08□□□□□ -0.63
PCDHGA8-201ENST00000398604 COQ9O75208 318 aa11.08□□□□□ -0.63
PCDHGA8-201ENST00000398604 RCBTB2O95199 551 aa11.08□□□□□ -0.63
PCDHGA8-201ENST00000398604 CTSAP10619 480 aa11.08□□□□□ -0.63
PCDHGA8-201ENST00000398604 BNIP3Q12983 259 aa11.08□□□□□ -0.63
PCDHGA8-201ENST00000398604 INAVAQ3KP66 663 aa11.08□□□□□ -0.63
PCDHGA8-201ENST00000398604 COLEC12Q5KU26 742 aa11.08□□□□□ -0.63
PCDHGA8-201ENST00000398604 PLEKHS1Q5SXH7 462 aa11.08□□□□□ -0.63
PCDHGA8-201ENST00000398604 LCN1P1Q5VSP4 162 aa11.08□□□□□ -0.63
PCDHGA8-201ENST00000398604 SNX29P2Q8IUI4 249 aa11.08□□□□□ -0.63
PCDHGA8-201ENST00000398604 KIAA1143Q96AT1 154 aaPredicted RBP11.08□□□□□ -0.63
PCDHGA8-201ENST00000398604 TCEAL4Q96EI5 215 aa11.08□□□□□ -0.63
PCDHGA8-201ENST00000398604 MED28Q9H204 178 aa11.08□□□□□ -0.63
PCDHGA8-201ENST00000398604 REEP4Q9H6H4 257 aa11.08□□□□□ -0.63
PCDHGA8-201ENST00000398604 BACE2Q9Y5Z0 518 aa11.08□□□□□ -0.63
PCDHGA8-201ENST00000398604 C2orf74A8MZ97 194 aa11.08□□□□□ -0.64
PCDHGA8-201ENST00000398604 CSTAP01040 98 aa11.08□□□□□ -0.64
PCDHGA8-201ENST00000398604 ITGA5P08648 1049 aa11.08□□□□□ -0.64
PCDHGA8-201ENST00000398604 CD1DP15813 335 aa11.08□□□□□ -0.64
PCDHGA8-201ENST00000398604 LEPRP48357 1165 aaKnown RBP11.08□□□□□ -0.64
PCDHGA8-201ENST00000398604 CLDN2P57739 230 aa11.08□□□□□ -0.64
PCDHGA8-201ENST00000398604 ABRAXAS2Q15018 415 aa11.08□□□□□ -0.64
PCDHGA8-201ENST00000398604 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.08□□□□□ -0.64
PCDHGA8-201ENST00000398604 TMEM135Q86UB9 458 aa11.08□□□□□ -0.64
PCDHGA8-201ENST00000398604 DNAJB8Q8NHS0 232 aa11.08□□□□□ -0.64
PCDHGA8-201ENST00000398604 CST11Q9H112 138 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms