RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 RAB12Q6IQ22 244 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 PWWP2BQ6NUJ5 590 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 BHLHB9Q6PI77 547 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 CNSTQ6PJW8 725 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 DLEU7Q6UYE1 221 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 C3P1Q6ZMU1 363 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 FRRS1Q6ZNA5 592 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 C17orf107Q6ZR85 190 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 ZSCAN30Q86W11 494 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 CACUL1Q86Y37 369 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 STHQ8IWL8 128 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 THEM5Q8N1Q8 247 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 SLC43A2Q8N370 569 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 HDDC3Q8N4P3 179 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 SMYD1Q8NB12 490 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 OR5M9Q8NGP3 310 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 OR13C5Q8NGS8 318 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 OR6S1Q8NH40 331 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 SPATA18Q8TC71 538 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 KIAA1524Q8TCG1 905 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 SLC13A3Q8WWT9 602 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 SLCO2A1Q92959 643 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 DTD2Q96FN9 168 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 ZNF486Q96H40 463 aaPredicted RBP2.33□□□□□ -2.04
CD47-203ENST00000398258 CDHR1Q96JP9 859 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 GPR137Q96N19 417 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 TMEM237Q96Q45 408 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 PKP2Q99959 881 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 ZNF577Q9BSK1 485 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 NTMT1Q9BV86 223 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 CLEC7AQ9BXN2 247 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 BARHL1Q9BZE3 327 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 TNMDQ9H2S6 317 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 MED20Q9H944 212 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 PLCXD1Q9NUJ7 323 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 ACOXLQ9NUZ1 547 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 AKAP7Q9P0M2 348 aaPredicted RBP2.33□□□□□ -2.04
CD47-203ENST00000398258 KLHL8Q9P2G9 620 aaPredicted RBP2.33□□□□□ -2.04
CD47-203ENST00000398258 DBF4Q9UBU7 674 aaPredicted RBP2.33□□□□□ -2.04
CD47-203ENST00000398258 TEKT2Q9UIF3 430 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 PPP1R3CQ9UQK1 317 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 RPH3AQ9Y2J0 694 aaPredicted RBP2.33□□□□□ -2.04
CD47-203ENST00000398258 WIPI2Q9Y4P8 454 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 ANGPTL3Q9Y5C1 460 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 ETV7Q9Y603 341 aa2.33□□□□□ -2.04
CD47-203ENST00000398258 COL2A1P02458 1487 aaPredicted RBP2.33□□□□□ -2.04
CD47-203ENST00000398258 KIAA1217Q5T5P2 1943 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 LOC105371242A0A075B767 164 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 CCDC162PA2VCL2 907 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 GLTPD2A6NH11 291 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 K7EQD1 137 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 RTCAO00442 366 aaKnown RBP2.32□□□□□ -2.04
CD47-203ENST00000398258 ZNF195O14628 629 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 PSMD3O43242 534 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 NME2P1O60361 137 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 TXNDC12O95881 172 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 IGHEP01854 428 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 ALPPP05187 535 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 NUDT17P0C025 328 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 ALPPL2P10696 532 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 GLRA1P23415 457 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 GJB2P29033 226 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 GPR183P32249 361 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 OPRL1P41146 370 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 VEGFCP49767 419 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 LBX1P52954 281 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 BACE1P56817 501 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 HUNKP57058 714 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 BPIFB3P59826 476 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 DRP2Q13474 957 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 GIT2Q14161 759 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 FCN2Q15485 313 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 OR1C1Q15619 314 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 C3AR1Q16581 482 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 SGSM1Q2NKQ1 1148 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 HERC4Q5GLZ8 1057 aaPredicted RBP2.32□□□□□ -2.04
CD47-203ENST00000398258 SNRNP48Q6IEG0 339 aaKnown RBP2.32□□□□□ -2.04
CD47-203ENST00000398258 KIF6Q6ZMV9 814 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 RFPL4BQ6ZWI9 263 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 MIER3Q7Z3K6 550 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 WDSUB1Q8N9V3 476 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 ADAD2Q8NCV1 583 aaKnown RBP2.32□□□□□ -2.04
CD47-203ENST00000398258 PRSS33Q8NF86 280 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 OR52E1Q8NGJ3 308 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 EXOC6Q8TAG9 804 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 GOLGA5Q8TBA6 731 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 GANCQ8TET4 914 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 UBTD2Q8WUN7 234 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 PRCCQ92733 491 aaPredicted RBP2.32□□□□□ -2.04
CD47-203ENST00000398258 GLYATL1Q969I3 302 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 MAGED4Q96JG8 741 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 NSMCE3Q96MG7 304 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 ZNF560Q96MR9 790 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 RUFY1Q96T51 708 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 TEX13AQ9BXU3 409 aaPredicted RBP2.32□□□□□ -2.04
CD47-203ENST00000398258 TRPV6Q9H1D0 765 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 CARD9Q9H257 536 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 GANQ9H2C0 597 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 HSD3B7Q9H2F3 369 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 PARLQ9H300 379 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms