RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 NKAIN2Q5VXU1 208 aa18.4■□□□□ 0.54
PDLIM2-204ENST00000397760 TCEAL6Q6IPX3 200 aa18.4■□□□□ 0.54
PDLIM2-204ENST00000397760 TTC33Q6PID6 262 aaPredicted RBP18.4■□□□□ 0.54
PDLIM2-204ENST00000397760 TCEAL3Q969E4 200 aa18.4■□□□□ 0.54
PDLIM2-204ENST00000397760 VPS33AQ96AX1 596 aa18.4■□□□□ 0.54
PDLIM2-204ENST00000397760 AHCYL2Q96HN2 611 aaKnown RBP18.4■□□□□ 0.54
PDLIM2-204ENST00000397760 FCRL4Q96PJ5 515 aa18.4■□□□□ 0.54
PDLIM2-204ENST00000397760 F2RL3Q96RI0 385 aa18.4■□□□□ 0.54
PDLIM2-204ENST00000397760 SEMA6CQ9H3T2 930 aa18.4■□□□□ 0.54
PDLIM2-204ENST00000397760 ACTL8Q9H568 366 aa18.4■□□□□ 0.54
PDLIM2-204ENST00000397760 AP3M1Q9Y2T2 418 aa18.4■□□□□ 0.54
PDLIM2-204ENST00000397760 MYOCOSA0A1B0GUC4 107 aa18.39■□□□□ 0.54
PDLIM2-204ENST00000397760 C9JVG2 144 aa18.39■□□□□ 0.54
PDLIM2-204ENST00000397760 H3BSA7 217 aa18.39■□□□□ 0.54
PDLIM2-204ENST00000397760 ANKRD28O15084 1053 aa18.39■□□□□ 0.54
PDLIM2-204ENST00000397760 CAPN5O15484 640 aaPredicted RBP18.39■□□□□ 0.54
PDLIM2-204ENST00000397760 PRAMEF10O60809 474 aa18.39■□□□□ 0.54
PDLIM2-204ENST00000397760 CTSVO60911 334 aa18.39■□□□□ 0.54
PDLIM2-204ENST00000397760 LDLRP01130 860 aa18.39■□□□□ 0.54
PDLIM2-204ENST00000397760 SDC1P18827 310 aa18.39■□□□□ 0.54
PDLIM2-204ENST00000397760 JAK1P23458 1154 aa18.39■□□□□ 0.54
PDLIM2-204ENST00000397760 SLC5A2P31639 672 aa18.39■□□□□ 0.54
PDLIM2-204ENST00000397760 RAE1P78406 368 aaKnown RBP18.39■□□□□ 0.54
PDLIM2-204ENST00000397760 NR1D2Q14995 579 aa18.39■□□□□ 0.54
PDLIM2-204ENST00000397760 NR0B2Q15466 257 aa18.39■□□□□ 0.54
PDLIM2-204ENST00000397760 ZIC1Q15915 447 aa18.39■□□□□ 0.54
PDLIM2-204ENST00000397760 RABL3Q5HYI8 236 aa18.39■□□□□ 0.54
PDLIM2-204ENST00000397760 COMMD6Q7Z4G1 85 aa18.39■□□□□ 0.54
PDLIM2-204ENST00000397760 METTL4Q8N3J2 472 aa18.39■□□□□ 0.54
PDLIM2-204ENST00000397760 EID2Q8N6I1 236 aa18.39■□□□□ 0.54
PDLIM2-204ENST00000397760 Q8N9G6 341 aaPredicted RBP18.39■□□□□ 0.54
PDLIM2-204ENST00000397760 OR8J3Q8NGG0 315 aa18.39■□□□□ 0.54
PDLIM2-204ENST00000397760 CLHC1Q8NHS4 586 aa18.39■□□□□ 0.54
PDLIM2-204ENST00000397760 POP5Q969H6 163 aaKnown RBP18.39■□□□□ 0.54
PDLIM2-204ENST00000397760 BDH2Q9BUT1 245 aa18.39■□□□□ 0.54
PDLIM2-204ENST00000397760 SYNPO2LQ9H987 977 aa18.39■□□□□ 0.54
PDLIM2-204ENST00000397760 SMPD3Q9NY59 655 aaPredicted RBP18.39■□□□□ 0.54
PDLIM2-204ENST00000397760 AHSPQ9NZD4 102 aa18.39■□□□□ 0.54
PDLIM2-204ENST00000397760 OAZ3Q9UMX2 235 aa18.39■□□□□ 0.54
PDLIM2-204ENST00000397760 IGHV1OR21-1A0A087WYE8 117 aa18.39■□□□□ 0.53
PDLIM2-204ENST00000397760 H0YAE9 185 aa18.39■□□□□ 0.53
PDLIM2-204ENST00000397760 STATHP02808 62 aa18.39■□□□□ 0.53
PDLIM2-204ENST00000397760 PCSK2P16519 638 aa18.39■□□□□ 0.53
PDLIM2-204ENST00000397760 TACR1P25103 407 aa18.39■□□□□ 0.53
PDLIM2-204ENST00000397760 IL12AP29459 219 aa18.39■□□□□ 0.53
PDLIM2-204ENST00000397760 FAM92BQ6ZTR7 304 aa18.39■□□□□ 0.53
PDLIM2-204ENST00000397760 ARHGAP22Q7Z5H3 698 aa18.39■□□□□ 0.53
PDLIM2-204ENST00000397760 PATL1Q86TB9 770 aaKnown RBP18.39■□□□□ 0.53
PDLIM2-204ENST00000397760 FAM181AQ8N9Y4 354 aa18.39■□□□□ 0.53
PDLIM2-204ENST00000397760 OR6C4Q8NGE1 309 aa18.39■□□□□ 0.53
PDLIM2-204ENST00000397760 TSSK3Q96PN8 268 aa18.39■□□□□ 0.53
PDLIM2-204ENST00000397760 MACROD1Q9BQ69 325 aa18.39■□□□□ 0.53
PDLIM2-204ENST00000397760 DPY30Q9C005 99 aa18.39■□□□□ 0.53
PDLIM2-204ENST00000397760 SIRT5Q9NXA8 310 aa18.39■□□□□ 0.53
PDLIM2-204ENST00000397760 PILRAQ9UKJ1 303 aa18.39■□□□□ 0.53
PDLIM2-204ENST00000397760 A0A0J9YVX5 310 aa18.38■□□□□ 0.53
PDLIM2-204ENST00000397760 NDUFS4O43181 175 aa18.38■□□□□ 0.53
PDLIM2-204ENST00000397760 B4GAT1O43505 415 aa18.38■□□□□ 0.53
PDLIM2-204ENST00000397760 PCDHGA12O60330 932 aa18.38■□□□□ 0.53
PDLIM2-204ENST00000397760 SEMA3DO95025 777 aa18.38■□□□□ 0.53
PDLIM2-204ENST00000397760 ST6GAL1P15907 406 aa18.38■□□□□ 0.53
PDLIM2-204ENST00000397760 HOXB6P17509 224 aaKnown RBP18.38■□□□□ 0.53
PDLIM2-204ENST00000397760 TIA1P31483 386 aaKnown RBP eCLIP18.38■□□□□ 0.53
PDLIM2-204ENST00000397760 CAPGP40121 348 aa18.38■□□□□ 0.53
PDLIM2-204ENST00000397760 RELAQ04206 551 aa18.38■□□□□ 0.53
PDLIM2-204ENST00000397760 AMZ1Q400G9 498 aa18.38■□□□□ 0.53
PDLIM2-204ENST00000397760 ZBED5Q49AG3 693 aa18.38■□□□□ 0.53
PDLIM2-204ENST00000397760 TIGD2Q4W5G0 525 aa18.38■□□□□ 0.53
PDLIM2-204ENST00000397760 PLA2G2CQ5R387 149 aa18.38■□□□□ 0.53
PDLIM2-204ENST00000397760 LAIR1Q6GTX8 287 aa18.38■□□□□ 0.53
PDLIM2-204ENST00000397760 GALNT18Q6P9A2 607 aa18.38■□□□□ 0.53
PDLIM2-204ENST00000397760 ISLR2Q6UXK2 745 aa18.38■□□□□ 0.53
PDLIM2-204ENST00000397760 FAM9CQ8IZT9 166 aa18.38■□□□□ 0.53
PDLIM2-204ENST00000397760 DHRSXQ8N5I4 330 aa18.38■□□□□ 0.53
PDLIM2-204ENST00000397760 WDR48Q8TAF3 677 aa18.38■□□□□ 0.53
PDLIM2-204ENST00000397760 SLC13A3Q8WWT9 602 aa18.38■□□□□ 0.53
PDLIM2-204ENST00000397760 CCDC74AQ96AQ1 378 aa18.38■□□□□ 0.53
PDLIM2-204ENST00000397760 ZDHHC12Q96GR4 267 aa18.38■□□□□ 0.53
PDLIM2-204ENST00000397760 NSMCE2Q96MF7 247 aa18.38■□□□□ 0.53
PDLIM2-204ENST00000397760 CCDC115Q96NT0 180 aa18.38■□□□□ 0.53
PDLIM2-204ENST00000397760 TGM7Q96PF1 710 aa18.38■□□□□ 0.53
PDLIM2-204ENST00000397760 OR2A5Q96R48 311 aa18.38■□□□□ 0.53
PDLIM2-204ENST00000397760 MAP3K3Q99759 626 aa18.38■□□□□ 0.53
PDLIM2-204ENST00000397760 ZFYVE21Q9BQ24 234 aa18.38■□□□□ 0.53
PDLIM2-204ENST00000397760 REXO4Q9GZR2 422 aaKnown RBP18.38■□□□□ 0.53
PDLIM2-204ENST00000397760 RAB33BQ9H082 229 aa18.38■□□□□ 0.53
PDLIM2-204ENST00000397760 C1GALT1Q9NS00 363 aa18.38■□□□□ 0.53
PDLIM2-204ENST00000397760 EPHA6Q9UF33 1036 aa18.38■□□□□ 0.53
PDLIM2-204ENST00000397760 WDFY4Q6ZS81 3184 aa18.38■□□□□ 0.53
PDLIM2-204ENST00000397760 LY6G6EA0A0G2JKS1 128 aa18.37■□□□□ 0.53
PDLIM2-204ENST00000397760 LRIT2A6NDA9 550 aa18.37■□□□□ 0.53
PDLIM2-204ENST00000397760 PLOD2O00469 737 aa18.37■□□□□ 0.53
PDLIM2-204ENST00000397760 PLPP1O14494 284 aa18.37■□□□□ 0.53
PDLIM2-204ENST00000397760 PCDH7O60245 1069 aa18.37■□□□□ 0.53
PDLIM2-204ENST00000397760 ANXA4P09525 319 aaPredicted RBP18.37■□□□□ 0.53
PDLIM2-204ENST00000397760 RPS6KA3P51812 740 aa18.37■□□□□ 0.53
PDLIM2-204ENST00000397760 GFERP55789 205 aa18.37■□□□□ 0.53
PDLIM2-204ENST00000397760 GPLD1P80108 840 aa18.37■□□□□ 0.53
PDLIM2-204ENST00000397760 PWP1Q13610 501 aa18.37■□□□□ 0.53
PDLIM2-204ENST00000397760 DLEU7Q6UYE1 221 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms