RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 SLC2A12Q8TD20 617 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 RSPRY1Q96DX4 576 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 TSSK3Q96PN8 268 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 MFRPQ9BY79 579 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 GRIP2Q9C0E4 1043 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 C14orf105Q9NVL8 296 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 SCN3BQ9NY72 215 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 PRSS21Q9Y6M0 314 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 SDK2Q58EX2 2172 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 EFCAB10A6NFE3 127 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 CCDC160A6NGH7 325 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 PDLIM1O00151 329 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 FAAHO00519 579 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 PDPK1O15530 556 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 ABCB7O75027 752 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 CD63P08962 238 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 MPIP34949 423 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 CENPAP49450 140 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 PRIM2P49643 509 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 CDK6Q00534 326 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 EIPR1Q53HC9 387 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.6□□□□□ -1.51
PTPRD-206ENST00000397617 SYT6Q5T7P8 510 aaPredicted RBP5.6□□□□□ -1.51
PTPRD-206ENST00000397617 TDHQ8IZJ6 230 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 RNF113BQ8IZP6 322 aaKnown RBP5.6□□□□□ -1.51
PTPRD-206ENST00000397617 MFSD9Q8NBP5 474 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 EXT2Q93063 718 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 TSC22D3Q99576 134 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 SLC39A3Q9BRY0 314 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 ING2Q9H160 280 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 C12orf10Q9HB07 376 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 NECTIN3Q9NQS3 549 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 SLC25A37Q9NYZ2 338 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 ATXN10Q9UBB4 475 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 FAF1Q9UNN5 650 aaPredicted RBP5.6□□□□□ -1.51
PTPRD-206ENST00000397617 COL4A2P08572 1712 aa5.59□□□□□ -1.51
PTPRD-206ENST00000397617 SLC22A1O15245 554 aa5.59□□□□□ -1.51
PTPRD-206ENST00000397617 EXOSC6Q5RKV6 272 aaKnown RBP5.59□□□□□ -1.51
PTPRD-206ENST00000397617 CFAP206Q8IYR0 622 aa5.59□□□□□ -1.51
PTPRD-206ENST00000397617 WDR48Q8TAF3 677 aa5.59□□□□□ -1.51
PTPRD-206ENST00000397617 SNX19Q92543 992 aa5.59□□□□□ -1.51
PTPRD-206ENST00000397617 C7orf34Q96L11 122 aa5.59□□□□□ -1.51
PTPRD-206ENST00000397617 STACQ99469 402 aa5.59□□□□□ -1.51
PTPRD-206ENST00000397617 CD22P20273 847 aa5.59□□□□□ -1.51
PTPRD-206ENST00000397617 ILKQ13418 452 aa5.59□□□□□ -1.51
PTPRD-206ENST00000397617 B3GNT6Q6ZMB0 384 aa5.59□□□□□ -1.51
PTPRD-206ENST00000397617 PRSS48Q7RTY5 328 aa5.59□□□□□ -1.51
PTPRD-206ENST00000397617 DNAJB14Q8TBM8 379 aa5.59□□□□□ -1.51
PTPRD-206ENST00000397617 LKAAEAR1Q8TD35 194 aa5.59□□□□□ -1.51
PTPRD-206ENST00000397617 SH3GL3Q99963 347 aa5.59□□□□□ -1.51
PTPRD-206ENST00000397617 PRO3102Q9H379 93 aa5.59□□□□□ -1.51
PTPRD-206ENST00000397617 COPS7BQ9H9Q2 264 aaPredicted RBP5.59□□□□□ -1.51
PTPRD-206ENST00000397617 BPIFA1Q9NP55 256 aa5.59□□□□□ -1.51
PTPRD-206ENST00000397617 PAPOLBQ9NRJ5 636 aaKnown RBP5.59□□□□□ -1.51
PTPRD-206ENST00000397617 CEP350Q5VT06 3117 aa5.59□□□□□ -1.51
PTPRD-206ENST00000397617 SPTAN1Q13813 2472 aaKnown RBP5.59□□□□□ -1.51
PTPRD-206ENST00000397617 DCKP27707 260 aa5.59□□□□□ -1.51
PTPRD-206ENST00000397617 BSGP35613 385 aa5.59□□□□□ -1.51
PTPRD-206ENST00000397617 KHKP50053 298 aa5.59□□□□□ -1.51
PTPRD-206ENST00000397617 HSD17B7P56937 341 aa5.59□□□□□ -1.51
PTPRD-206ENST00000397617 PCBP4P57723 403 aaKnown RBP5.59□□□□□ -1.51
PTPRD-206ENST00000397617 CSNK1G2P78368 415 aa5.59□□□□□ -1.51
PTPRD-206ENST00000397617 SERTAD2Q14140 314 aa5.59□□□□□ -1.51
PTPRD-206ENST00000397617 FAM214AQ32MH5 1076 aa5.59□□□□□ -1.51
PTPRD-206ENST00000397617 TANGO2Q6ICL3 276 aa5.59□□□□□ -1.51
PTPRD-206ENST00000397617 ZNF440Q8IYI8 595 aa5.59□□□□□ -1.51
PTPRD-206ENST00000397617 CHDHQ8NE62 594 aaPredicted RBP5.59□□□□□ -1.51
PTPRD-206ENST00000397617 PHYHIPQ92561 330 aa5.59□□□□□ -1.51
PTPRD-206ENST00000397617 PKP4Q99569 1192 aa5.59□□□□□ -1.51
PTPRD-206ENST00000397617 EBF3Q9H4W6 596 aa5.59□□□□□ -1.51
PTPRD-206ENST00000397617 DSPPQ9NZW4 1301 aa5.59□□□□□ -1.51
PTPRD-206ENST00000397617 A0A1W2PQF6 199 aa5.59□□□□□ -1.51
PTPRD-206ENST00000397617 PEX19P40855 299 aa5.59□□□□□ -1.51
PTPRD-206ENST00000397617 VIPR2P41587 438 aa5.59□□□□□ -1.51
PTPRD-206ENST00000397617 HMGCS1Q01581 520 aa5.59□□□□□ -1.51
PTPRD-206ENST00000397617 TP53BP2Q13625 1128 aa5.59□□□□□ -1.51
PTPRD-206ENST00000397617 C5orf46Q6UWT4 87 aa5.59□□□□□ -1.51
PTPRD-206ENST00000397617 P2RX2Q9UBL9 471 aa5.59□□□□□ -1.51
PTPRD-206ENST00000397617 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.59□□□□□ -1.51
PTPRD-206ENST00000397617 ASB1Q9Y576 335 aa5.59□□□□□ -1.51
PTPRD-206ENST00000397617 DLGAP1O14490 977 aa5.59□□□□□ -1.51
PTPRD-206ENST00000397617 OR4D2P58180 307 aa5.59□□□□□ -1.51
PTPRD-206ENST00000397617 SNRPGP62308 76 aaKnown RBP5.59□□□□□ -1.51
PTPRD-206ENST00000397617 PHC1P78364 1004 aa5.59□□□□□ -1.51
PTPRD-206ENST00000397617 HYAL1Q12794 435 aa5.59□□□□□ -1.51
PTPRD-206ENST00000397617 KRR1Q13601 381 aaKnown RBP5.59□□□□□ -1.51
PTPRD-206ENST00000397617 ZNF852Q6ZMS4 543 aa5.59□□□□□ -1.51
PTPRD-206ENST00000397617 PRR23CQ6ZRP0 262 aa5.59□□□□□ -1.51
PTPRD-206ENST00000397617 CDRT4Q8N9R6 151 aa5.59□□□□□ -1.51
PTPRD-206ENST00000397617 OR6K2Q8NGY2 324 aa5.59□□□□□ -1.51
PTPRD-206ENST00000397617 NDEL1Q9GZM8 345 aa5.59□□□□□ -1.51
PTPRD-206ENST00000397617 SLC35C2Q9NQQ7 365 aa5.59□□□□□ -1.51
PTPRD-206ENST00000397617 NEUROG3Q9Y4Z2 214 aa5.59□□□□□ -1.51
PTPRD-206ENST00000397617 A0A1W2PQU0 124 aa5.59□□□□□ -1.52
PTPRD-206ENST00000397617 NME1P15531 152 aaKnown RBP5.59□□□□□ -1.52
PTPRD-206ENST00000397617 TPP2P29144 1249 aaPredicted RBP5.59□□□□□ -1.52
PTPRD-206ENST00000397617 GDI1P31150 447 aa5.59□□□□□ -1.52
PTPRD-206ENST00000397617 DCAF7P61962 342 aa5.59□□□□□ -1.52
PTPRD-206ENST00000397617 EEF1A2Q05639 463 aaKnown RBP5.59□□□□□ -1.52
PTPRD-206ENST00000397617 GPR50Q13585 617 aa5.59□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms