RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 CYLC2Q14093 348 aaPredicted RBP16.04■□□□□ 0.16
TSPAN4-205ENST00000397406 DEFB134Q4QY38 66 aa16.04■□□□□ 0.16
TSPAN4-205ENST00000397406 PHF19Q5T6S3 580 aa16.04■□□□□ 0.16
TSPAN4-205ENST00000397406 GARNL3Q5VVW2 1013 aa16.04■□□□□ 0.16
TSPAN4-205ENST00000397406 IKBIPQ70UQ0 350 aa16.04■□□□□ 0.16
TSPAN4-205ENST00000397406 PDSS2Q86YH6 399 aa16.04■□□□□ 0.16
TSPAN4-205ENST00000397406 GLB1L3Q8NCI6 653 aaPredicted RBP16.04■□□□□ 0.16
TSPAN4-205ENST00000397406 OR1L3Q8NH93 324 aa16.04■□□□□ 0.16
TSPAN4-205ENST00000397406 CDC26Q8NHZ8 85 aa16.04■□□□□ 0.16
TSPAN4-205ENST00000397406 TSPEARQ8WU66 669 aa16.04■□□□□ 0.16
TSPAN4-205ENST00000397406 GFM2Q969S9 779 aaKnown RBP16.04■□□□□ 0.16
TSPAN4-205ENST00000397406 TESCQ96BS2 214 aa16.04■□□□□ 0.16
TSPAN4-205ENST00000397406 TM4SF18Q96CE8 201 aa16.04■□□□□ 0.16
TSPAN4-205ENST00000397406 SERINC2Q96SA4 455 aa16.04■□□□□ 0.16
TSPAN4-205ENST00000397406 ZBTB18Q99592 522 aa16.04■□□□□ 0.16
TSPAN4-205ENST00000397406 SLC25A23Q9BV35 468 aa16.04■□□□□ 0.16
TSPAN4-205ENST00000397406 ROGDIQ9GZN7 287 aa16.04■□□□□ 0.16
TSPAN4-205ENST00000397406 COPS7BQ9H9Q2 264 aaPredicted RBP16.04■□□□□ 0.16
TSPAN4-205ENST00000397406 FGF21Q9NSA1 209 aa16.04■□□□□ 0.16
TSPAN4-205ENST00000397406 ASB4Q9Y574 426 aa16.04■□□□□ 0.16
TSPAN4-205ENST00000397406 URB1O60287 2271 aaKnown RBP16.04■□□□□ 0.16
TSPAN4-205ENST00000397406 HYKKA2RU49 373 aa16.03■□□□□ 0.16
TSPAN4-205ENST00000397406 SCAMP2O15127 329 aaKnown RBP16.03■□□□□ 0.16
TSPAN4-205ENST00000397406 AKAP10O43572 662 aa16.03■□□□□ 0.16
TSPAN4-205ENST00000397406 GALR3O60755 368 aaPredicted RBP16.03■□□□□ 0.16
TSPAN4-205ENST00000397406 OR2B3O76000 313 aa16.03■□□□□ 0.16
TSPAN4-205ENST00000397406 UNC5CO95185 931 aa16.03■□□□□ 0.16
TSPAN4-205ENST00000397406 IL3P08700 152 aa16.03■□□□□ 0.16
TSPAN4-205ENST00000397406 FAM58BPP0C7Q3 252 aa16.03■□□□□ 0.16
TSPAN4-205ENST00000397406 ESRRAP11474 423 aaPredicted RBP16.03■□□□□ 0.16
TSPAN4-205ENST00000397406 IL1RNP18510 177 aa16.03■□□□□ 0.16
TSPAN4-205ENST00000397406 EIF2S3P41091 472 aaKnown RBP16.03■□□□□ 0.16
TSPAN4-205ENST00000397406 CPA2P48052 419 aa16.03■□□□□ 0.16
TSPAN4-205ENST00000397406 MTTPP55157 894 aa16.03■□□□□ 0.16
TSPAN4-205ENST00000397406 HNRNPH2P55795 449 aaKnown RBP16.03■□□□□ 0.16
TSPAN4-205ENST00000397406 KCNK10P57789 538 aa16.03■□□□□ 0.16
TSPAN4-205ENST00000397406 SLAMF1Q13291 335 aa16.03■□□□□ 0.16
TSPAN4-205ENST00000397406 GRM7Q14831 915 aa16.03■□□□□ 0.16
TSPAN4-205ENST00000397406 C16orf72Q14CZ0 275 aa16.03■□□□□ 0.16
TSPAN4-205ENST00000397406 UGT8Q16880 541 aa16.03■□□□□ 0.16
TSPAN4-205ENST00000397406 TMEM132CQ8N3T6 1108 aa16.03■□□□□ 0.16
TSPAN4-205ENST00000397406 SPDL1Q96EA4 605 aa16.03■□□□□ 0.16
TSPAN4-205ENST00000397406 TEX10Q9NXF1 929 aaPredicted RBP16.03■□□□□ 0.16
TSPAN4-205ENST00000397406 MAPRE3Q9UPY8 281 aa16.03■□□□□ 0.16
TSPAN4-205ENST00000397406 WBP11Q9Y2W2 641 aaKnown RBP16.03■□□□□ 0.16
TSPAN4-205ENST00000397406 AK5Q9Y6K8 562 aa16.03■□□□□ 0.16
TSPAN4-205ENST00000397406 SMG1Q96Q15 3661 aaKnown RBP16.03■□□□□ 0.16
TSPAN4-205ENST00000397406 A0A088AWK7 358 aa16.02■□□□□ 0.16
TSPAN4-205ENST00000397406 ASPDHA6ND91 283 aa16.02■□□□□ 0.16
TSPAN4-205ENST00000397406 FBP2O00757 339 aa16.02■□□□□ 0.16
TSPAN4-205ENST00000397406 CSO75390 466 aaKnown RBP16.02■□□□□ 0.16
TSPAN4-205ENST00000397406 ZNF10P21506 573 aaPredicted RBP16.02■□□□□ 0.16
TSPAN4-205ENST00000397406 CCKBRP32239 447 aa16.02■□□□□ 0.16
TSPAN4-205ENST00000397406 ITGA1P56199 1179 aa16.02■□□□□ 0.16
TSPAN4-205ENST00000397406 MC1RQ01726 317 aa16.02■□□□□ 0.16
TSPAN4-205ENST00000397406 ACY1Q03154 408 aa16.02■□□□□ 0.16
TSPAN4-205ENST00000397406 KLC1Q07866 573 aa16.02■□□□□ 0.16
TSPAN4-205ENST00000397406 C2orf80Q0P641 193 aa16.02■□□□□ 0.16
TSPAN4-205ENST00000397406 COL9A2Q14055 689 aaPredicted RBP16.02■□□□□ 0.16
TSPAN4-205ENST00000397406 SLC9A5Q14940 896 aa16.02■□□□□ 0.16
TSPAN4-205ENST00000397406 NDUFA9Q16795 377 aa16.02■□□□□ 0.16
TSPAN4-205ENST00000397406 KIF26BQ2KJY2 2108 aa16.02■□□□□ 0.16
TSPAN4-205ENST00000397406 SPANXN4Q5MJ08 99 aa16.02■□□□□ 0.16
TSPAN4-205ENST00000397406 RBM44Q6ZP01 1051 aaKnown RBP16.02■□□□□ 0.16
TSPAN4-205ENST00000397406 ZNF771Q7L3S4 317 aaPredicted RBP16.02■□□□□ 0.16
TSPAN4-205ENST00000397406 CAMKMTQ7Z624 323 aa16.02■□□□□ 0.16
TSPAN4-205ENST00000397406 TTC29Q8NA56 475 aaPredicted RBP16.02■□□□□ 0.16
TSPAN4-205ENST00000397406 BBC3Q96PG8 261 aaPredicted RBP16.02■□□□□ 0.16
TSPAN4-205ENST00000397406 REEP4Q9H6H4 257 aa16.02■□□□□ 0.16
TSPAN4-205ENST00000397406 FANCEQ9HB96 536 aa16.02■□□□□ 0.16
TSPAN4-205ENST00000397406 TXLNGQ9NUQ3 528 aa16.02■□□□□ 0.16
TSPAN4-205ENST00000397406 IRAK4Q9NWZ3 460 aa16.02■□□□□ 0.16
TSPAN4-205ENST00000397406 ATP6V1HQ9UI12 483 aa16.02■□□□□ 0.16
TSPAN4-205ENST00000397406 NAALAD2Q9Y3Q0 740 aa16.02■□□□□ 0.16
TSPAN4-205ENST00000397406 FER1L5A0AVI2 2057 aa16.02■□□□□ 0.16
TSPAN4-205ENST00000397406 SCN2AQ99250 2005 aa16.02■□□□□ 0.15
TSPAN4-205ENST00000397406 DYTNA2CJ06 578 aa16.02■□□□□ 0.15
TSPAN4-205ENST00000397406 FOXS1O43638 330 aa16.02■□□□□ 0.15
TSPAN4-205ENST00000397406 B3GALT2O43825 422 aa16.02■□□□□ 0.15
TSPAN4-205ENST00000397406 ATP5HO75947 161 aa16.02■□□□□ 0.15
TSPAN4-205ENST00000397406 KIAA0754O94854 1291 aa16.02■□□□□ 0.15
TSPAN4-205ENST00000397406 IL6P05231 212 aa16.02■□□□□ 0.15
TSPAN4-205ENST00000397406 FURINP09958 794 aa16.02■□□□□ 0.15
TSPAN4-205ENST00000397406 HPCAL1P37235 193 aa16.02■□□□□ 0.15
TSPAN4-205ENST00000397406 DGKQP52824 942 aa16.02■□□□□ 0.15
TSPAN4-205ENST00000397406 STX5Q13190 355 aa16.02■□□□□ 0.15
TSPAN4-205ENST00000397406 PDE7AQ13946 482 aa16.02■□□□□ 0.15
TSPAN4-205ENST00000397406 RUNX2Q13950 521 aa16.02■□□□□ 0.15
TSPAN4-205ENST00000397406 FAM53BQ14153 422 aa16.02■□□□□ 0.15
TSPAN4-205ENST00000397406 ISXQ2M1V0 245 aa16.02■□□□□ 0.15
TSPAN4-205ENST00000397406 DPY19L1Q2PZI1 675 aa16.02■□□□□ 0.15
TSPAN4-205ENST00000397406 FAM174BQ3ZCQ3 159 aa16.02■□□□□ 0.15
TSPAN4-205ENST00000397406 VPS26BQ4G0F5 336 aa16.02■□□□□ 0.15
TSPAN4-205ENST00000397406 TIGD2Q4W5G0 525 aa16.02■□□□□ 0.15
TSPAN4-205ENST00000397406 TLDC1Q6P9B6 456 aa16.02■□□□□ 0.15
TSPAN4-205ENST00000397406 MMP21Q8N119 569 aa16.02■□□□□ 0.15
TSPAN4-205ENST00000397406 DTWD1Q8N5C7 304 aa16.02■□□□□ 0.15
TSPAN4-205ENST00000397406 OR7A2PQ8NGA2 310 aa16.02■□□□□ 0.15
TSPAN4-205ENST00000397406 SNIP1Q8TAD8 396 aaKnown RBP16.02■□□□□ 0.15
TSPAN4-205ENST00000397406 STARD8Q92502 1023 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms