RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 ZBTB20Q9HC78 741 aaPredicted RBP13.71□□□□□ -0.21
SEC13-208ENST00000397109 TMEM216Q9P0N5 145 aa13.71□□□□□ -0.21
SEC13-208ENST00000397109 SLC17A7Q9P2U7 560 aa13.71□□□□□ -0.21
SEC13-208ENST00000397109 ZNF490Q9ULM2 529 aaPredicted RBP13.71□□□□□ -0.21
SEC13-208ENST00000397109 TMCO1Q9UM00 188 aa13.71□□□□□ -0.21
SEC13-208ENST00000397109 ANGPTL3Q9Y5C1 460 aa13.71□□□□□ -0.21
SEC13-208ENST00000397109 ERI3O43414 337 aaKnown RBP13.7□□□□□ -0.22
SEC13-208ENST00000397109 KLK8O60259 260 aa13.7□□□□□ -0.22
SEC13-208ENST00000397109 B3GALT4O96024 378 aa13.7□□□□□ -0.22
SEC13-208ENST00000397109 SBK3P0C264 359 aa13.7□□□□□ -0.22
SEC13-208ENST00000397109 SERPINB1P30740 379 aa13.7□□□□□ -0.22
SEC13-208ENST00000397109 ALDH3A1P30838 453 aa13.7□□□□□ -0.22
SEC13-208ENST00000397109 OLR1P78380 273 aa13.7□□□□□ -0.22
SEC13-208ENST00000397109 INPP5JQ15735 1006 aaPredicted RBP13.7□□□□□ -0.22
SEC13-208ENST00000397109 EXT1Q16394 746 aa13.7□□□□□ -0.22
SEC13-208ENST00000397109 PFKFB4Q16877 469 aa13.7□□□□□ -0.22
SEC13-208ENST00000397109 ADPRMQ3LIE5 342 aa13.7□□□□□ -0.22
SEC13-208ENST00000397109 PLAG1Q6DJT9 500 aa13.7□□□□□ -0.22
SEC13-208ENST00000397109 MED27Q6P2C8 311 aa13.7□□□□□ -0.22
SEC13-208ENST00000397109 TRIM40Q6P9F5 258 aa13.7□□□□□ -0.22
SEC13-208ENST00000397109 QSOX2Q6ZRP7 698 aa13.7□□□□□ -0.22
SEC13-208ENST00000397109 CCDC121Q6ZUS5 278 aa13.7□□□□□ -0.22
SEC13-208ENST00000397109 LANCL3Q6ZV70 420 aa13.7□□□□□ -0.22
SEC13-208ENST00000397109 TEX9Q8N6V9 391 aa13.7□□□□□ -0.22
SEC13-208ENST00000397109 SRFBP1Q8NEF9 429 aaKnown RBP13.7□□□□□ -0.22
SEC13-208ENST00000397109 OR2L5Q8NG80 312 aa13.7□□□□□ -0.22
SEC13-208ENST00000397109 PSMF1Q92530 271 aa13.7□□□□□ -0.22
SEC13-208ENST00000397109 RBCK1Q9BYM8 510 aa13.7□□□□□ -0.22
SEC13-208ENST00000397109 REXO4Q9GZR2 422 aaKnown RBP13.7□□□□□ -0.22
SEC13-208ENST00000397109 XPR1Q9UBH6 696 aa13.7□□□□□ -0.22
SEC13-208ENST00000397109 ADGRE2Q9UHX3 823 aa13.7□□□□□ -0.22
SEC13-208ENST00000397109 EMCNQ9ULC0 261 aa13.7□□□□□ -0.22
SEC13-208ENST00000397109 ASB1Q9Y576 335 aa13.7□□□□□ -0.22
SEC13-208ENST00000397109 DYTNA2CJ06 578 aa13.69□□□□□ -0.22
SEC13-208ENST00000397109 CCT8L1PA6NM43 557 aa13.69□□□□□ -0.22
SEC13-208ENST00000397109 B3GALT2O43825 422 aa13.69□□□□□ -0.22
SEC13-208ENST00000397109 PRMT3O60678 531 aa13.69□□□□□ -0.22
SEC13-208ENST00000397109 B4GALT2O60909 372 aa13.69□□□□□ -0.22
SEC13-208ENST00000397109 DNAJB6O75190 326 aa13.69□□□□□ -0.22
SEC13-208ENST00000397109 VPS4BO75351 444 aa13.69□□□□□ -0.22
SEC13-208ENST00000397109 CDC123O75794 336 aaPredicted RBP13.69□□□□□ -0.22
SEC13-208ENST00000397109 SEC24DO94855 1032 aaPredicted RBP13.69□□□□□ -0.22
SEC13-208ENST00000397109 TROVE2P10155 538 aaKnown RBP eCLIP13.69□□□□□ -0.22
SEC13-208ENST00000397109 NEFHP12036 1026 aa13.69□□□□□ -0.22
SEC13-208ENST00000397109 CD22P20273 847 aa13.69□□□□□ -0.22
SEC13-208ENST00000397109 HNRNPH1P31943 449 aaKnown RBP13.69□□□□□ -0.22
SEC13-208ENST00000397109 PIK3CGP48736 1102 aa13.69□□□□□ -0.22
SEC13-208ENST00000397109 PRKAA2P54646 552 aa13.69□□□□□ -0.22
SEC13-208ENST00000397109 IFT88Q13099 833 aa13.69□□□□□ -0.22
SEC13-208ENST00000397109 PCBP2Q15366 365 aaKnown RBP eCLIP13.69□□□□□ -0.223e-9■■■■■ 55.9
SEC13-208ENST00000397109 SPDYAQ5MJ70 313 aa13.69□□□□□ -0.22
SEC13-208ENST00000397109 LINC00696Q6ZRV3 163 aa13.69□□□□□ -0.22
SEC13-208ENST00000397109 VN1R5Q7Z5H4 357 aa13.69□□□□□ -0.22
SEC13-208ENST00000397109 NUDCD3Q8IVD9 361 aa13.69□□□□□ -0.22
SEC13-208ENST00000397109 GALNT11Q8NCW6 608 aa13.69□□□□□ -0.22
SEC13-208ENST00000397109 ARMC2Q8NEN0 867 aa13.69□□□□□ -0.22
SEC13-208ENST00000397109 DNAJB14Q8TBM8 379 aa13.69□□□□□ -0.22
SEC13-208ENST00000397109 M1APQ8TC57 530 aa13.69□□□□□ -0.22
SEC13-208ENST00000397109 BRIX1Q8TDN6 353 aaKnown RBP13.69□□□□□ -0.22
SEC13-208ENST00000397109 ADAMTS18Q8TE60 1221 aa13.69□□□□□ -0.22
SEC13-208ENST00000397109 SREK1Q8WXA9 508 aaKnown RBP13.69□□□□□ -0.22
SEC13-208ENST00000397109 SCYL1Q96KG9 808 aa13.69□□□□□ -0.22
SEC13-208ENST00000397109 C7orf26Q96N11 449 aa13.69□□□□□ -0.22
SEC13-208ENST00000397109 LPAR4Q99677 370 aa13.69□□□□□ -0.22
SEC13-208ENST00000397109 SIKE1Q9BRV8 207 aa13.69□□□□□ -0.22
SEC13-208ENST00000397109 ROGDIQ9GZN7 287 aa13.69□□□□□ -0.22
SEC13-208ENST00000397109 AICDAQ9GZX7 198 aa13.69□□□□□ -0.22
SEC13-208ENST00000397109 PRM3Q9NNZ6 103 aa13.69□□□□□ -0.22
SEC13-208ENST00000397109 PTGFRNQ9P2B2 879 aa13.69□□□□□ -0.22
SEC13-208ENST00000397109 CPSF2Q9P2I0 782 aaKnown RBP13.69□□□□□ -0.22
SEC13-208ENST00000397109 TEKT2Q9UIF3 430 aa13.69□□□□□ -0.22
SEC13-208ENST00000397109 VPS4AQ9UN37 437 aa13.69□□□□□ -0.22
SEC13-208ENST00000397109 PRRC2CQ9Y520 2896 aaKnown RBP13.69□□□□□ -0.22
SEC13-208ENST00000397109 TENM4Q6N022 2769 aa13.69□□□□□ -0.22
SEC13-208ENST00000397109 OR2W5A6NFC9 320 aa13.68□□□□□ -0.22
SEC13-208ENST00000397109 PLIN3O60664 434 aa13.68□□□□□ -0.22
SEC13-208ENST00000397109 PROCP04070 461 aa13.68□□□□□ -0.22
SEC13-208ENST00000397109 BPGMP07738 259 aa13.68□□□□□ -0.22
SEC13-208ENST00000397109 ITGAMP11215 1152 aa13.68□□□□□ -0.22
SEC13-208ENST00000397109 GRK2P25098 689 aa13.68□□□□□ -0.22
SEC13-208ENST00000397109 SOX11P35716 441 aa13.68□□□□□ -0.22
SEC13-208ENST00000397109 PLA2G16P53816 162 aa13.68□□□□□ -0.22
SEC13-208ENST00000397109 CORO7P57737 925 aa13.68□□□□□ -0.22
SEC13-208ENST00000397109 OR4D2P58180 307 aa13.68□□□□□ -0.22
SEC13-208ENST00000397109 RCN2Q14257 317 aa13.68□□□□□ -0.22
SEC13-208ENST00000397109 TLR1Q15399 786 aa13.68□□□□□ -0.22
SEC13-208ENST00000397109 BTBD16Q32M84 506 aa13.68□□□□□ -0.22
SEC13-208ENST00000397109 TMEM35AQ53FP2 167 aa13.68□□□□□ -0.22
SEC13-208ENST00000397109 SFT2D3Q587I9 215 aa13.68□□□□□ -0.22
SEC13-208ENST00000397109 LIPJQ5W064 366 aa13.68□□□□□ -0.22
SEC13-208ENST00000397109 GRHL2Q6ISB3 625 aa13.68□□□□□ -0.22
SEC13-208ENST00000397109 ABHD17CQ6PCB6 329 aa13.68□□□□□ -0.22
SEC13-208ENST00000397109 LAS2Q8IYD9 372 aa13.68□□□□□ -0.22
SEC13-208ENST00000397109 SHISA5Q8N114 240 aa13.68□□□□□ -0.22
SEC13-208ENST00000397109 CA13Q8N1Q1 262 aa13.68□□□□□ -0.22
SEC13-208ENST00000397109 RDH11Q8TC12 318 aa13.68□□□□□ -0.22
SEC13-208ENST00000397109 PTCHD1Q96NR3 888 aa13.68□□□□□ -0.22
SEC13-208ENST00000397109 QRFPRQ96P65 431 aa13.68□□□□□ -0.22
SEC13-208ENST00000397109 SERINC2Q96SA4 455 aa13.68□□□□□ -0.22
SEC13-208ENST00000397109 SLC29A3Q9BZD2 475 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms