RNA–Protein interactions for RNA: ENST00000396542.5

TNFSF13-204, Transcript of TNF superfamily member 13, humanhuman

TSL 3 BASIC

Gene TNFSF13, Length 726 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-204ENST00000396542 ASPHQ12797 758 aa16.72■□□□□ 0.27
TNFSF13-204ENST00000396542 ABRAXAS2Q15018 415 aa16.72■□□□□ 0.27
TNFSF13-204ENST00000396542 PCOLCEQ15113 449 aa16.72■□□□□ 0.27
TNFSF13-204ENST00000396542 NSDHLQ15738 373 aa16.72■□□□□ 0.27
TNFSF13-204ENST00000396542 TCHHL1Q5QJ38 904 aaPredicted RBP16.72■□□□□ 0.27
TNFSF13-204ENST00000396542 ANKRD37Q7Z713 158 aa16.72■□□□□ 0.27
TNFSF13-204ENST00000396542 METTL6Q8TCB7 284 aa16.72■□□□□ 0.27
TNFSF13-204ENST00000396542 SELENOMQ8WWX9 145 aa16.72■□□□□ 0.27
TNFSF13-204ENST00000396542 TSLPQ969D9 159 aa16.72■□□□□ 0.27
TNFSF13-204ENST00000396542 TRMOQ9BU70 441 aa16.72■□□□□ 0.27
TNFSF13-204ENST00000396542 DDX31Q9H8H2 851 aaKnown RBP16.72■□□□□ 0.27
TNFSF13-204ENST00000396542 PRM3Q9NNZ6 103 aa16.72■□□□□ 0.27
TNFSF13-204ENST00000396542 MID1IP1Q9NPA3 183 aa16.72■□□□□ 0.27
TNFSF13-204ENST00000396542 PRDM9Q9NQV7 894 aa16.72■□□□□ 0.27
TNFSF13-204ENST00000396542 C19orf25Q9UFG5 118 aaPredicted RBP16.72■□□□□ 0.27
TNFSF13-204ENST00000396542 MMACHCQ9Y4U1 282 aa16.72■□□□□ 0.27
TNFSF13-204ENST00000396542 DOCK10Q96BY6 2186 aa16.72■□□□□ 0.27
TNFSF13-204ENST00000396542 A0A0A6YYD5 115 aa16.71■□□□□ 0.27
TNFSF13-204ENST00000396542 NSG1A0A0A6YYJ2 146 aa16.71■□□□□ 0.27
TNFSF13-204ENST00000396542 SERTM1A2A2V5 107 aa16.71■□□□□ 0.27
TNFSF13-204ENST00000396542 PRMT3O60678 531 aa16.71■□□□□ 0.27
TNFSF13-204ENST00000396542 HSD3B1P14060 373 aa16.71■□□□□ 0.27
TNFSF13-204ENST00000396542 H2AFXP16104 143 aaPredicted RBP16.71■□□□□ 0.27
TNFSF13-204ENST00000396542 HSD3B2P26439 372 aa16.71■□□□□ 0.27
TNFSF13-204ENST00000396542 HNRNPFP52597 415 aaKnown RBP16.71■□□□□ 0.27
TNFSF13-204ENST00000396542 FOXA1P55317 472 aa16.71■□□□□ 0.27
TNFSF13-204ENST00000396542 HSD17B7P56937 341 aa16.71■□□□□ 0.27
TNFSF13-204ENST00000396542 BTG2P78543 158 aa16.71■□□□□ 0.27
TNFSF13-204ENST00000396542 Q0VFX4 171 aa16.71■□□□□ 0.27
TNFSF13-204ENST00000396542 CSTF3Q12996 717 aaKnown RBP16.71■□□□□ 0.27
TNFSF13-204ENST00000396542 RCN2Q14257 317 aa16.71■□□□□ 0.27
TNFSF13-204ENST00000396542 SGO1Q5FBB7 561 aa16.71■□□□□ 0.27
TNFSF13-204ENST00000396542 TCTN3Q6NUS6 607 aa16.71■□□□□ 0.27
TNFSF13-204ENST00000396542 CPEB2Q7Z5Q1 589 aaKnown RBP16.71■□□□□ 0.27
TNFSF13-204ENST00000396542 NUDT13Q86X67 352 aa16.71■□□□□ 0.27
TNFSF13-204ENST00000396542 SCUBE1Q8IWY4 988 aa16.71■□□□□ 0.27
TNFSF13-204ENST00000396542 ZNF595Q8IYB9 648 aa16.71■□□□□ 0.27
TNFSF13-204ENST00000396542 GALNT16Q8N428 558 aa16.71■□□□□ 0.27
TNFSF13-204ENST00000396542 TMEM52Q8NDY8 209 aa16.71■□□□□ 0.27
TNFSF13-204ENST00000396542 FDCSPQ8NFU4 85 aa16.71■□□□□ 0.27
TNFSF13-204ENST00000396542 C9orf43Q8TAL5 461 aaPredicted RBP16.71■□□□□ 0.27
TNFSF13-204ENST00000396542 ZBTB9Q96C00 473 aa16.71■□□□□ 0.27
TNFSF13-204ENST00000396542 CNDP1Q96KN2 507 aa16.71■□□□□ 0.27
TNFSF13-204ENST00000396542 IMMP1LQ96LU5 166 aa16.71■□□□□ 0.27
TNFSF13-204ENST00000396542 KCNA7Q96RP8 456 aa16.71■□□□□ 0.27
TNFSF13-204ENST00000396542 CSF3RQ99062 836 aa16.71■□□□□ 0.27
TNFSF13-204ENST00000396542 MAPKAP1Q9BPZ7 522 aa16.71■□□□□ 0.27
TNFSF13-204ENST00000396542 WDR77Q9BQA1 342 aaPredicted RBP16.71■□□□□ 0.27
TNFSF13-204ENST00000396542 MECRQ9BV79 373 aa16.71■□□□□ 0.27
TNFSF13-204ENST00000396542 STMN4Q9H169 189 aaPredicted RBP16.71■□□□□ 0.27
TNFSF13-204ENST00000396542 SLC25A18Q9H1K4 315 aa16.71■□□□□ 0.27
TNFSF13-204ENST00000396542 ZNF160Q9HCG1 818 aa16.71■□□□□ 0.27
TNFSF13-204ENST00000396542 RIC8BQ9NVN3 520 aa16.71■□□□□ 0.27
TNFSF13-204ENST00000396542 CLDN16Q9Y5I7 305 aa16.71■□□□□ 0.27
TNFSF13-204ENST00000396542 BSNQ9UPA5 3926 aa16.71■□□□□ 0.27
TNFSF13-204ENST00000396542 TNRC6AQ8NDV7 1962 aaKnown RBP16.7■□□□□ 0.26
TNFSF13-204ENST00000396542 TCRBV16S1A1N1A0A5B0 115 aa16.7■□□□□ 0.26
TNFSF13-204ENST00000396542 TM9SF1O15321 606 aa16.7■□□□□ 0.26
TNFSF13-204ENST00000396542 NPHS1O60500 1241 aa16.7■□□□□ 0.26
TNFSF13-204ENST00000396542 ULK1O75385 1050 aa16.7■□□□□ 0.26
TNFSF13-204ENST00000396542 EEDO75530 441 aaKnown RBP16.7■□□□□ 0.26
TNFSF13-204ENST00000396542 BPGMP07738 259 aa16.7■□□□□ 0.26
TNFSF13-204ENST00000396542 MAOAP21397 527 aa16.7■□□□□ 0.26
TNFSF13-204ENST00000396542 HMOX2P30519 316 aa16.7■□□□□ 0.26
TNFSF13-204ENST00000396542 HTR6P50406 440 aa16.7■□□□□ 0.26
TNFSF13-204ENST00000396542 TBL3Q12788 808 aaKnown RBP16.7■□□□□ 0.26
TNFSF13-204ENST00000396542 SLAMF1Q13291 335 aa16.7■□□□□ 0.26
TNFSF13-204ENST00000396542 MPP2Q14168 576 aa16.7■□□□□ 0.26
TNFSF13-204ENST00000396542 MYBPC3Q14896 1274 aa16.7■□□□□ 0.26
TNFSF13-204ENST00000396542 MRM1Q6IN84 353 aaKnown RBP16.7■□□□□ 0.26
TNFSF13-204ENST00000396542 METTL4Q8N3J2 472 aa16.7■□□□□ 0.26
TNFSF13-204ENST00000396542 FAM47BQ8NA70 645 aa16.7■□□□□ 0.26
TNFSF13-204ENST00000396542 OR6Y1Q8NGX8 325 aa16.7■□□□□ 0.26
TNFSF13-204ENST00000396542 PTCHD1Q96NR3 888 aa16.7■□□□□ 0.26
TNFSF13-204ENST00000396542 TUBB6Q9BUF5 446 aa16.7■□□□□ 0.26
TNFSF13-204ENST00000396542 SLC25A23Q9BV35 468 aa16.7■□□□□ 0.26
TNFSF13-204ENST00000396542 NUDT9Q9BW91 350 aa16.7■□□□□ 0.26
TNFSF13-204ENST00000396542 TMBIM4Q9HC24 238 aa16.7■□□□□ 0.26
TNFSF13-204ENST00000396542 TNFRSF12AQ9NP84 129 aa16.7■□□□□ 0.26
TNFSF13-204ENST00000396542 NECTIN3Q9NQS3 549 aa16.7■□□□□ 0.26
TNFSF13-204ENST00000396542 ADAM29Q9UKF5 820 aa16.7■□□□□ 0.26
TNFSF13-204ENST00000396542 MRPS33Q9Y291 106 aaKnown RBP16.7■□□□□ 0.26
TNFSF13-204ENST00000396542 TIMM22Q9Y584 194 aa16.7■□□□□ 0.26
TNFSF13-204ENST00000396542 IGHV3-20A0A0C4DH32 117 aa16.69■□□□□ 0.26
TNFSF13-204ENST00000396542 BLACEA4D250 179 aa16.69■□□□□ 0.26
TNFSF13-204ENST00000396542 K7EM74 188 aa16.69■□□□□ 0.26
TNFSF13-204ENST00000396542 CLDN4O14493 209 aa16.69■□□□□ 0.26
TNFSF13-204ENST00000396542 TMPRSS11DO60235 418 aa16.69■□□□□ 0.26
TNFSF13-204ENST00000396542 PDGFAP04085 211 aa16.69■□□□□ 0.26
TNFSF13-204ENST00000396542 DHRS4L1P0CG22 281 aa16.69■□□□□ 0.26
TNFSF13-204ENST00000396542 HNRNPH2P55795 449 aaKnown RBP16.69■□□□□ 0.26
TNFSF13-204ENST00000396542 GALNT1Q10472 559 aaPredicted RBP16.69■□□□□ 0.26
TNFSF13-204ENST00000396542 GBP7Q8N8V2 638 aaPredicted RBP16.69■□□□□ 0.26
TNFSF13-204ENST00000396542 TLCD1Q96CP7 247 aa16.69■□□□□ 0.26
TNFSF13-204ENST00000396542 HBEGFQ99075 208 aa16.69■□□□□ 0.26
TNFSF13-204ENST00000396542 SMAD5Q99717 465 aaKnown RBP16.69■□□□□ 0.26
TNFSF13-204ENST00000396542 MRPL1Q9BYD6 325 aaKnown RBP16.69■□□□□ 0.26
TNFSF13-204ENST00000396542 PRTFDC1Q9NRG1 225 aa16.69■□□□□ 0.26
TNFSF13-204ENST00000396542 NMRK1Q9NWW6 199 aa16.69■□□□□ 0.26
TNFSF13-204ENST00000396542 LYARQ9NX58 379 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms