RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 IGHV3-20A0A0C4DH32 117 aa15.58■□□□□ 0.08
CXCL1-201ENST00000395761 A6NL46 340 aa15.58■□□□□ 0.08
CXCL1-201ENST00000395761 EEDO75530 441 aaKnown RBP15.58■□□□□ 0.08
CXCL1-201ENST00000395761 SCELO95171 688 aa15.58■□□□□ 0.08
CXCL1-201ENST00000395761 C8orf89P0DMQ9 161 aa15.58■□□□□ 0.08
CXCL1-201ENST00000395761 ACPPP15309 386 aa15.58■□□□□ 0.08
CXCL1-201ENST00000395761 HIST1H1TP22492 207 aaPredicted RBP15.58■□□□□ 0.08
CXCL1-201ENST00000395761 BSGP35613 385 aa15.58■□□□□ 0.08
CXCL1-201ENST00000395761 SSR2P43308 183 aa15.58■□□□□ 0.08
CXCL1-201ENST00000395761 HNRNPFP52597 415 aaKnown RBP15.58■□□□□ 0.08
CXCL1-201ENST00000395761 RAB38P57729 211 aa15.58■□□□□ 0.08
CXCL1-201ENST00000395761 TUBB8Q3ZCM7 444 aa15.58■□□□□ 0.08
CXCL1-201ENST00000395761 TRIM42Q8IWZ5 723 aa15.58■□□□□ 0.08
CXCL1-201ENST00000395761 PLPP5Q8NEB5 264 aa15.58■□□□□ 0.08
CXCL1-201ENST00000395761 RAB3IL1Q8TBN0 382 aa15.58■□□□□ 0.08
CXCL1-201ENST00000395761 FER1L6-AS2Q96M78 137 aa15.58■□□□□ 0.08
CXCL1-201ENST00000395761 CSF3RQ99062 836 aa15.58■□□□□ 0.08
CXCL1-201ENST00000395761 SERPINI1Q99574 410 aa15.58■□□□□ 0.08
CXCL1-201ENST00000395761 PAIP2Q9BPZ3 127 aaKnown RBP15.58■□□□□ 0.08
CXCL1-201ENST00000395761 SLC29A3Q9BZD2 475 aa15.58■□□□□ 0.08
CXCL1-201ENST00000395761 ROGDIQ9GZN7 287 aa15.58■□□□□ 0.08
CXCL1-201ENST00000395761 MLXIPLQ9NP71 852 aa15.58■□□□□ 0.08
CXCL1-201ENST00000395761 PPT2Q9UMR5 302 aa15.58■□□□□ 0.08
CXCL1-201ENST00000395761 DAPP1Q9UN19 280 aa15.58■□□□□ 0.08
CXCL1-201ENST00000395761 STK38LQ9Y2H1 464 aa15.58■□□□□ 0.08
CXCL1-201ENST00000395761 LOC102723996A0A087X1L8 192 aa15.57■□□□□ 0.08
CXCL1-201ENST00000395761 K7EM74 188 aa15.57■□□□□ 0.08
CXCL1-201ENST00000395761 PSMD12O00232 456 aaPredicted RBP15.57■□□□□ 0.08
CXCL1-201ENST00000395761 CYR61O00622 381 aa15.57■□□□□ 0.08
CXCL1-201ENST00000395761 ENO1P06733 434 aaKnown RBP15.57■□□□□ 0.08
CXCL1-201ENST00000395761 COX6A1P12074 109 aa15.57■□□□□ 0.08
CXCL1-201ENST00000395761 JAK1P23458 1154 aa15.57■□□□□ 0.08
CXCL1-201ENST00000395761 SERPINB3P29508 390 aa15.57■□□□□ 0.08
CXCL1-201ENST00000395761 HMOX2P30519 316 aa15.57■□□□□ 0.08
CXCL1-201ENST00000395761 SERPINB5P36952 375 aa15.57■□□□□ 0.08
CXCL1-201ENST00000395761 HTR6P50406 440 aa15.57■□□□□ 0.08
CXCL1-201ENST00000395761 RRADP55042 308 aa15.57■□□□□ 0.08
CXCL1-201ENST00000395761 KCNAB2Q13303 367 aa15.57■□□□□ 0.08
CXCL1-201ENST00000395761 ABRAXAS2Q15018 415 aa15.57■□□□□ 0.08
CXCL1-201ENST00000395761 NSDHLQ15738 373 aa15.57■□□□□ 0.08
CXCL1-201ENST00000395761 C10orf62Q5T681 223 aaPredicted RBP15.57■□□□□ 0.08
CXCL1-201ENST00000395761 SCIMPQ6UWF3 145 aa15.57■□□□□ 0.08
CXCL1-201ENST00000395761 ZCCHC23Q6ZST2 131 aa15.57■□□□□ 0.08
CXCL1-201ENST00000395761 ANKRD37Q7Z713 158 aa15.57■□□□□ 0.08
CXCL1-201ENST00000395761 FAM47BQ8NA70 645 aa15.57■□□□□ 0.08
CXCL1-201ENST00000395761 METTL21AQ8WXB1 218 aa15.57■□□□□ 0.08
CXCL1-201ENST00000395761 ABHD17AQ96GS6 310 aa15.57■□□□□ 0.08
CXCL1-201ENST00000395761 CNDP1Q96KN2 507 aa15.57■□□□□ 0.08
CXCL1-201ENST00000395761 PTCHD1Q96NR3 888 aa15.57■□□□□ 0.08
CXCL1-201ENST00000395761 CENPKQ9BS16 269 aa15.57■□□□□ 0.08
CXCL1-201ENST00000395761 ZNF160Q9HCG1 818 aa15.57■□□□□ 0.08
CXCL1-201ENST00000395761 ATRXP46100 2492 aa15.57■□□□□ 0.08
CXCL1-201ENST00000395761 MED13Q9UHV7 2174 aa15.56■□□□□ 0.08
CXCL1-201ENST00000395761 IGHV1-45A0A0A0MS14 117 aa15.56■□□□□ 0.08
CXCL1-201ENST00000395761 A0A1W2PQ72 361 aa15.56■□□□□ 0.08
CXCL1-201ENST00000395761 WDR91A4D1P6 747 aa15.56■□□□□ 0.08
CXCL1-201ENST00000395761 KLF11O14901 512 aa15.56■□□□□ 0.08
CXCL1-201ENST00000395761 NPHS1O60500 1241 aa15.56■□□□□ 0.08
CXCL1-201ENST00000395761 PRMT3O60678 531 aa15.56■□□□□ 0.08
CXCL1-201ENST00000395761 ULK1O75385 1050 aa15.56■□□□□ 0.08
CXCL1-201ENST00000395761 SEMA3DO95025 777 aa15.56■□□□□ 0.08
CXCL1-201ENST00000395761 KRT6AP02538 564 aa15.56■□□□□ 0.08
CXCL1-201ENST00000395761 KRT6BP04259 564 aa15.56■□□□□ 0.08
CXCL1-201ENST00000395761 SERPINE1P05121 402 aa15.56■□□□□ 0.08
CXCL1-201ENST00000395761 MAOAP21397 527 aa15.56■□□□□ 0.08
CXCL1-201ENST00000395761 GRK2P25098 689 aa15.56■□□□□ 0.08
CXCL1-201ENST00000395761 KRT6CP48668 564 aa15.56■□□□□ 0.08
CXCL1-201ENST00000395761 ARFIP1P53367 373 aa15.56■□□□□ 0.08
CXCL1-201ENST00000395761 Q0VFX4 171 aa15.56■□□□□ 0.08
CXCL1-201ENST00000395761 GALNT1Q10472 559 aaPredicted RBP15.56■□□□□ 0.08
CXCL1-201ENST00000395761 SLAMF1Q13291 335 aa15.56■□□□□ 0.08
CXCL1-201ENST00000395761 RAPSNQ13702 412 aa15.56■□□□□ 0.08
CXCL1-201ENST00000395761 PCOLCEQ15113 449 aa15.56■□□□□ 0.08
CXCL1-201ENST00000395761 ATG14Q6ZNE5 492 aa15.56■□□□□ 0.08
CXCL1-201ENST00000395761 NDUFAF7Q7L592 441 aa15.56■□□□□ 0.08
CXCL1-201ENST00000395761 PARP9Q8IXQ6 854 aa15.56■□□□□ 0.08
CXCL1-201ENST00000395761 ZCCHC7Q8N3Z6 543 aaKnown RBP15.56■□□□□ 0.08
CXCL1-201ENST00000395761 CKAP2Q8WWK9 683 aa15.56■□□□□ 0.08
CXCL1-201ENST00000395761 SLC39A7Q92504 469 aa15.56■□□□□ 0.08
CXCL1-201ENST00000395761 TRMOQ9BU70 441 aa15.56■□□□□ 0.08
CXCL1-201ENST00000395761 MRPL1Q9BYD6 325 aaKnown RBP15.56■□□□□ 0.08
CXCL1-201ENST00000395761 ZNF700Q9H0M5 742 aa15.56■□□□□ 0.08
CXCL1-201ENST00000395761 ADNPQ9H2P0 1102 aa15.56■□□□□ 0.08
CXCL1-201ENST00000395761 DDX31Q9H8H2 851 aaKnown RBP15.56■□□□□ 0.08
CXCL1-201ENST00000395761 LYRM4Q9HD34 91 aa15.56■□□□□ 0.08
CXCL1-201ENST00000395761 ATP13A2Q9NQ11 1180 aa15.56■□□□□ 0.08
CXCL1-201ENST00000395761 NECTIN3Q9NQS3 549 aa15.56■□□□□ 0.08
CXCL1-201ENST00000395761 FBXW2Q9UKT8 454 aa15.56■□□□□ 0.08
CXCL1-201ENST00000395761 SLC12A4Q9UP95 1085 aa15.56■□□□□ 0.08
CXCL1-201ENST00000395761 FAM208BQ5VWN6 2430 aa15.56■□□□□ 0.08
CXCL1-201ENST00000395761 SCN2AQ99250 2005 aa15.55■□□□□ 0.08
CXCL1-201ENST00000395761 A0A0A6YYD5 115 aa15.55■□□□□ 0.08
CXCL1-201ENST00000395761 TGFBR3LH3BV60 316 aa15.55■□□□□ 0.08
CXCL1-201ENST00000395761 TMPRSS11DO60235 418 aa15.55■□□□□ 0.08
CXCL1-201ENST00000395761 CEACAM4O75871 244 aa15.55■□□□□ 0.08
CXCL1-201ENST00000395761 HPP00738 406 aa15.55■□□□□ 0.08
CXCL1-201ENST00000395761 GBAP04062 536 aa15.55■□□□□ 0.08
CXCL1-201ENST00000395761 CHRNGP07510 517 aa15.55■□□□□ 0.08
CXCL1-201ENST00000395761 CYC1P08574 325 aa15.55■□□□□ 0.08
CXCL1-201ENST00000395761 ARRB2P32121 409 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms