RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 GBX1Q14549 363 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 WSCD2Q2TBF2 565 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 TMPPEQ6ZT21 453 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 OR6N2Q8NGY6 317 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 TMEM80Q96HE8 168 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 ZBTB26Q9HCK0 441 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 PIAS3Q9Y6X2 628 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 FAM72CH0Y354 149 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 BEST1O76090 585 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 PDYNP01213 254 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 NTSR1P30989 418 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 GNG2P59768 71 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 ADAM15Q13444 863 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 FAM72AQ5TYM5 149 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 RAET1LQ5VY80 246 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 FAM72DQ6L9T8 149 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 TTLL10Q6ZVT0 673 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 FAM72BQ86X60 149 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 CSNK1A1LQ8N752 337 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 OR9I1Q8NGQ6 314 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 BBS10Q8TAM1 723 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 DAZLQ92904 295 aaKnown RBP10□□□□□ -0.81
COL4A6-203ENST00000394872 TPSD1Q9BZJ3 242 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 MYADML2A6NDP7 307 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 TGM5O43548 720 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 CSTAP01040 98 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 RPS15AP62244 130 aaKnown RBP10□□□□□ -0.81
COL4A6-203ENST00000394872 ELAVL3Q14576 367 aaKnown RBP10□□□□□ -0.81
COL4A6-203ENST00000394872 USP53Q70EK8 1073 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 ZNF572Q7Z3I7 529 aaPredicted RBP10□□□□□ -0.81
COL4A6-203ENST00000394872 FARSAQ9Y285 508 aaKnown RBP10□□□□□ -0.81
COL4A6-203ENST00000394872 PCDHGA10Q9Y5H3 936 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 SLC35F4A4IF30 521 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 STC2O76061 302 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 MAPK3P27361 379 aaPredicted RBP10□□□□□ -0.81
COL4A6-203ENST00000394872 HERV-K104P61576 105 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 FAM69BQ5VUD6 431 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 OR10T2Q8NGX3 314 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 OR5P2Q8WZ92 322 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 OSBPL7Q9BZF2 842 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 STYXL1Q9Y6J8 313 aa10□□□□□ -0.81
COL4A6-203ENST00000394872 MATN2O00339 956 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 EDNRBP24530 442 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 BMPR1AP36894 532 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 VIPR2P41587 438 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 PCLAFQ15004 111 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 NNATQ16517 81 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 FBXO43Q4G163 708 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 GPRIN1Q7Z2K8 1008 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 PACRGLQ8N7B6 248 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 PXYLP1Q8TE99 480 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 BIRC7Q96CA5 298 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 SLC7A6OSQ96CW6 309 aaPredicted RBP9.99□□□□□ -0.81
COL4A6-203ENST00000394872 TMEM41AQ96HV5 264 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 SLC33A1O00400 549 aaPredicted RBP9.99□□□□□ -0.81
COL4A6-203ENST00000394872 FCER2P06734 321 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 IL3P08700 152 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 FPR1P21462 350 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 OTX2P32243 289 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 OR1E2P47887 323 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 DNAJB13P59910 316 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 ADAM17P78536 824 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 ECH1Q13011 328 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 DNASE1L3Q13609 305 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.99□□□□□ -0.81
COL4A6-203ENST00000394872 SNX29P2Q8IUI4 249 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 ZNF100Q8IYN0 542 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 GLIS1Q8NBF1 620 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 SHKBP1Q8TBC3 707 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 SLC2A13Q96QE2 648 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 ZNF395Q9H8N7 513 aaPredicted RBP9.99□□□□□ -0.81
COL4A6-203ENST00000394872 MEAF6Q9HAF1 191 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 TM9SF3Q9HD45 589 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 ACTR3BQ9P1U1 418 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 SPEF2Q9C093 1822 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 C8BP07358 591 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 MRPL3P09001 348 aaKnown RBP9.99□□□□□ -0.81
COL4A6-203ENST00000394872 C6P13671 934 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 C5AR1P21730 350 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 ARF3P61204 181 aaPredicted RBP9.99□□□□□ -0.81
COL4A6-203ENST00000394872 TBPL1P62380 186 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 ARF1P84077 181 aaKnown RBP9.99□□□□□ -0.81
COL4A6-203ENST00000394872 SOX4Q06945 474 aaPredicted RBP9.99□□□□□ -0.81
COL4A6-203ENST00000394872 DEFB134Q4QY38 66 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 SLC25A25Q6KCM7 469 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 TIFABQ6ZNK6 161 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 SLC44A3Q8N4M1 653 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 PLEKHO2Q8TD55 490 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 NSMAFQ92636 917 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 SLC5A7Q9GZV3 580 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 RETREG1Q9H6L5 497 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 SLC7A8Q9UHI5 535 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 SMAD9O15198 467 aaKnown RBP9.99□□□□□ -0.81
COL4A6-203ENST00000394872 SDC3O75056 442 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 TMEM107Q6UX40 140 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 SIAH1Q8IUQ4 282 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 ZDHHC1Q8WTX9 485 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 IMP4Q96G21 291 aaKnown RBP9.99□□□□□ -0.81
COL4A6-203ENST00000394872 SLC2A11Q9BYW1 496 aa9.99□□□□□ -0.81
COL4A6-203ENST00000394872 IRF2BPLQ9H1B7 796 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms