RNA–Protein interactions for RNA: ENST00000393965.7

CCDC142-202, Transcript of coiled-coil domain containing 142, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC142, Length 3,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-202ENST00000393965 PAPLNO95428 1278 aa13.11□□□□□ -0.31
CCDC142-202ENST00000393965 TBX6O95947 436 aaPredicted RBP13.11□□□□□ -0.31
CCDC142-202ENST00000393965 DDX6P26196 483 aaKnown RBP eCLIP13.11□□□□□ -0.31
CCDC142-202ENST00000393965 SSTR4P31391 388 aa13.11□□□□□ -0.31
CCDC142-202ENST00000393965 IL12RB1P42701 662 aa13.11□□□□□ -0.31
CCDC142-202ENST00000393965 CTSKP43235 329 aa13.11□□□□□ -0.31
CCDC142-202ENST00000393965 MVDP53602 400 aa13.11□□□□□ -0.31
CCDC142-202ENST00000393965 RAB25P57735 213 aa13.11□□□□□ -0.31
CCDC142-202ENST00000393965 ST8SIA6P61647 398 aa13.11□□□□□ -0.31
CCDC142-202ENST00000393965 ZNF691Q5VV52 312 aa13.11□□□□□ -0.31
CCDC142-202ENST00000393965 WASH2PQ6VEQ5 465 aa13.11□□□□□ -0.31
CCDC142-202ENST00000393965 SYNPOQ8N3V7 929 aa13.11□□□□□ -0.31
CCDC142-202ENST00000393965 CELF5Q8N6W0 485 aaKnown RBP13.11□□□□□ -0.31
CCDC142-202ENST00000393965 LEMD2Q8NC56 503 aa13.11□□□□□ -0.31
CCDC142-202ENST00000393965 OR4A15Q8NGL6 344 aa13.11□□□□□ -0.31
CCDC142-202ENST00000393965 SP7Q8TDD2 431 aaPredicted RBP13.11□□□□□ -0.31
CCDC142-202ENST00000393965 UBASH3BQ8TF42 649 aa13.11□□□□□ -0.31
CCDC142-202ENST00000393965 CHFRQ96EP1 664 aa13.11□□□□□ -0.31
CCDC142-202ENST00000393965 NUAK2Q9H093 628 aa13.11□□□□□ -0.31
CCDC142-202ENST00000393965 TIGARQ9NQ88 270 aa13.11□□□□□ -0.31
CCDC142-202ENST00000393965 NUP210Q8TEM1 1887 aaPredicted RBP13.11□□□□□ -0.31
CCDC142-202ENST00000393965 PIPSLA2A3N6 862 aa13.11□□□□□ -0.31
CCDC142-202ENST00000393965 SLC35F4A4IF30 521 aa13.11□□□□□ -0.31
CCDC142-202ENST00000393965 LRRTM2O43300 516 aa13.11□□□□□ -0.31
CCDC142-202ENST00000393965 NDUFB5O43674 189 aa13.11□□□□□ -0.31
CCDC142-202ENST00000393965 LZTS3O60299 673 aaPredicted RBP13.11□□□□□ -0.31
CCDC142-202ENST00000393965 NME6O75414 186 aaPredicted RBP13.11□□□□□ -0.31
CCDC142-202ENST00000393965 CCNDBP1O95273 360 aa13.11□□□□□ -0.31
CCDC142-202ENST00000393965 KLK1P06870 262 aa13.11□□□□□ -0.31
CCDC142-202ENST00000393965 IGFBP1P08833 259 aaPredicted RBP13.11□□□□□ -0.31
CCDC142-202ENST00000393965 MAGEA8P43361 318 aa13.11□□□□□ -0.31
CCDC142-202ENST00000393965 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.11□□□□□ -0.31
CCDC142-202ENST00000393965 ZDHHC5Q9C0B5 715 aa13.11□□□□□ -0.31
CCDC142-202ENST00000393965 IL1RAPQ9NPH3 570 aa13.11□□□□□ -0.31
CCDC142-202ENST00000393965 TMEM9Q9P0T7 183 aa13.11□□□□□ -0.31
CCDC142-202ENST00000393965 DKK3Q9UBP4 350 aa13.11□□□□□ -0.31
CCDC142-202ENST00000393965 SERGEFQ9UGK8 458 aa13.11□□□□□ -0.31
CCDC142-202ENST00000393965 PCDHB11Q9Y5F2 797 aa13.11□□□□□ -0.31
CCDC142-202ENST00000393965 SNX11Q9Y5W9 270 aa13.11□□□□□ -0.31
CCDC142-202ENST00000393965 PRAMEF33A0A0G2JMD5 474 aa13.11□□□□□ -0.31
CCDC142-202ENST00000393965 FEZF1A0PJY2 475 aa13.11□□□□□ -0.31
CCDC142-202ENST00000393965 PPM1DO15297 605 aa13.11□□□□□ -0.31
CCDC142-202ENST00000393965 ASNA1O43681 348 aa13.11□□□□□ -0.31
CCDC142-202ENST00000393965 CCNKO75909 580 aa13.11□□□□□ -0.31
CCDC142-202ENST00000393965 KRT8P05787 483 aa13.11□□□□□ -0.31
CCDC142-202ENST00000393965 CAMK2GQ13555 558 aaPredicted RBP13.11□□□□□ -0.31
CCDC142-202ENST00000393965 RGNQ15493 299 aa13.11□□□□□ -0.31
CCDC142-202ENST00000393965 STEAP3Q658P3 488 aa13.11□□□□□ -0.31
CCDC142-202ENST00000393965 ATL1Q8WXF7 558 aa13.11□□□□□ -0.31
CCDC142-202ENST00000393965 RSPO3Q9BXY4 272 aaPredicted RBP13.11□□□□□ -0.31
CCDC142-202ENST00000393965 CUEDC1Q9NWM3 386 aaPredicted RBP13.11□□□□□ -0.31
CCDC142-202ENST00000393965 TOR4AQ9NXH8 423 aa13.11□□□□□ -0.31
CCDC142-202ENST00000393965 NPIPB8E9PQR5 432 aa13.1□□□□□ -0.31
CCDC142-202ENST00000393965 PCCBP05166 539 aa13.1□□□□□ -0.31
CCDC142-202ENST00000393965 CD40LGP29965 261 aa13.1□□□□□ -0.31
CCDC142-202ENST00000393965 TIA1P31483 386 aaKnown RBP eCLIP13.1□□□□□ -0.31
CCDC142-202ENST00000393965 KCNJ10P78508 379 aa13.1□□□□□ -0.31
CCDC142-202ENST00000393965 PLEKHG7Q6ZR37 379 aa13.1□□□□□ -0.31
CCDC142-202ENST00000393965 AKAP14Q86UN6 197 aa13.1□□□□□ -0.31
CCDC142-202ENST00000393965 GALNT13Q8IUC8 556 aa13.1□□□□□ -0.31
CCDC142-202ENST00000393965 TRIM48Q8IWZ4 208 aa13.1□□□□□ -0.31
CCDC142-202ENST00000393965 NPAS3Q8IXF0 933 aa13.1□□□□□ -0.31
CCDC142-202ENST00000393965 SLC5A8Q8N695 610 aa13.1□□□□□ -0.31
CCDC142-202ENST00000393965 FAM83CQ9BQN1 747 aa13.1□□□□□ -0.31
CCDC142-202ENST00000393965 WDR12Q9GZL7 423 aaKnown RBP13.1□□□□□ -0.31
CCDC142-202ENST00000393965 ACOT13Q9NPJ3 140 aa13.1□□□□□ -0.31
CCDC142-202ENST00000393965 ASCC3Q8N3C0 2202 aaKnown RBP13.1□□□□□ -0.31
CCDC142-202ENST00000393965 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.1□□□□□ -0.31
CCDC142-202ENST00000393965 PRR23AA6NEV1 266 aa13.1□□□□□ -0.31
CCDC142-202ENST00000393965 TAF4O00268 1085 aa13.1□□□□□ -0.31
CCDC142-202ENST00000393965 TNFRSF11BO00300 401 aa13.1□□□□□ -0.31
CCDC142-202ENST00000393965 CD6P30203 668 aa13.1□□□□□ -0.31
CCDC142-202ENST00000393965 GRK5P34947 590 aa13.1□□□□□ -0.31
CCDC142-202ENST00000393965 TAS2R50P59544 299 aa13.1□□□□□ -0.31
CCDC142-202ENST00000393965 SRSF11Q05519 484 aaKnown RBP13.1□□□□□ -0.31
CCDC142-202ENST00000393965 CNTN1Q12860 1018 aa13.1□□□□□ -0.31
CCDC142-202ENST00000393965 C9orf50Q5SZB4 431 aa13.1□□□□□ -0.31
CCDC142-202ENST00000393965 TPRG1LQ5T0D9 272 aa13.1□□□□□ -0.31
CCDC142-202ENST00000393965 ATAD3BQ5T9A4 648 aa13.1□□□□□ -0.31
CCDC142-202ENST00000393965 MED27Q6P2C8 311 aa13.1□□□□□ -0.31
CCDC142-202ENST00000393965 GET4Q7L5D6 327 aaPredicted RBP13.1□□□□□ -0.31
CCDC142-202ENST00000393965 CAMKK1Q8N5S9 505 aa13.1□□□□□ -0.31
CCDC142-202ENST00000393965 SETD9Q8NE22 299 aa13.1□□□□□ -0.31
CCDC142-202ENST00000393965 OR52E4Q8NGH9 312 aa13.1□□□□□ -0.31
CCDC142-202ENST00000393965 MACROD1Q9BQ69 325 aa13.1□□□□□ -0.31
CCDC142-202ENST00000393965 SNTG1Q9NSN8 517 aa13.1□□□□□ -0.31
CCDC142-202ENST00000393965 KCNE2Q9Y6J6 123 aa13.1□□□□□ -0.31
CCDC142-202ENST00000393965 CXorf51AA0A1B0GTR3 108 aa13.1□□□□□ -0.31
CCDC142-202ENST00000393965 TMEM221A6NGB7 291 aa13.1□□□□□ -0.31
CCDC142-202ENST00000393965 SUV39H1O43463 412 aa13.1□□□□□ -0.31
CCDC142-202ENST00000393965 HPRP00739 348 aa13.1□□□□□ -0.31
CCDC142-202ENST00000393965 P2RY2P41231 377 aa13.1□□□□□ -0.31
CCDC142-202ENST00000393965 TSTQ16762 297 aaKnown RBP13.1□□□□□ -0.31
CCDC142-202ENST00000393965 HNRNPA1L2Q32P51 320 aaKnown RBP13.1□□□□□ -0.31
CCDC142-202ENST00000393965 ARMCX4Q5H9R4 360 aa13.1□□□□□ -0.31
CCDC142-202ENST00000393965 TNFAIP8L2Q6P589 184 aaPredicted RBP13.1□□□□□ -0.31
CCDC142-202ENST00000393965 SHQ1Q6PI26 577 aaKnown RBP13.1□□□□□ -0.31
CCDC142-202ENST00000393965 ZNF605Q86T29 641 aa13.1□□□□□ -0.31
CCDC142-202ENST00000393965 SVOPLQ8N434 492 aa13.1□□□□□ -0.31
CCDC142-202ENST00000393965 TIFAQ96CG3 184 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms