RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 ZNF33BQ06732 778 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 TGM3Q08188 693 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 IFFO1Q0D2I5 559 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 SLC13A2Q13183 592 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 AP5B1Q2VPB7 878 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 TMEM35AQ53FP2 167 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 DEPDC1Q5TB30 811 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 C18orf63Q68DL7 685 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 TTC19Q6DKK2 380 aaPredicted RBP7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 NIPAL1Q6NVV3 410 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 WDR93Q6P2C0 686 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 QSOX2Q6ZRP7 698 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 MILR1Q7Z6M3 343 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 TDRPQ86YL5 185 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 SCUBE1Q8IWY4 988 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 OR4N5Q8IXE1 308 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 CDYL2Q8N8U2 506 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 ACOT4Q8N9L9 421 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 PLPP5Q8NEB5 264 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 ACMSDQ8TDX5 336 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 DOK4Q8TEW6 326 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 PPP4R1Q8TF05 950 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 UCN3Q969E3 161 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 CAVIN3Q969G5 261 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 C19orf60Q96EN9 201 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 CMTM7Q96FZ5 175 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 SEC16BQ96JE7 1060 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 VPS50Q96JG6 964 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 KCNA7Q96RP8 456 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 NPAS2Q99743 824 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 NPLQ9BXD5 320 aaPredicted RBP7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 ERVK-6Q9BXR3 956 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 ZNF717Q9BY31 904 aaPredicted RBP7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 ILKAPQ9H0C8 392 aaPredicted RBP7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 PRDM9Q9NQV7 894 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 PRTFDC1Q9NRG1 225 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 PNO1Q9NRX1 252 aaKnown RBP7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 ANKRD10Q9NXR5 420 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 KCMF1Q9P0J7 381 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 DAPP1Q9UN19 280 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 PCDHGB7Q9Y5F8 929 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 PCDHGA11Q9Y5H2 935 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 NUP210LQ5VU65 1888 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 SCN3AQ9NY46 2000 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 A0A088AWK7 358 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 SAGE2PA6NJ88 616 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 GLOD5A6NK44 160 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 COPEO14579 308 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 TMPRSS11DO60235 418 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 PLIN3O60664 434 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 UGDHO60701 494 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 CDH16O75309 829 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 SPAG7O75391 227 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 MYO1DO94832 1006 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 SCELO95171 688 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 WDPCPO95876 746 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 OTCP00480 354 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 PDYNP01213 254 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 GSTA1P08263 222 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 NUDT17P0C025 328 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 MYL2P10916 166 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 CHN1P15882 459 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 CREB1P16220 341 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 ZNF10P21506 573 aaPredicted RBP7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 IL10P22301 178 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 CPN2P22792 545 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 SERPINB1P30740 379 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 CRHR1P34998 444 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 BSGP35613 385 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 DEKP35659 375 aaKnown RBP7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 UQCRFS1P47985 274 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 HTR6P50406 440 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 PRKAA2P54646 552 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 HNRNPH2P55795 449 aaKnown RBP7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 ARG2P78540 354 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 SLAMF1Q13291 335 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 MFAP5Q13361 173 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 CRB2Q5IJ48 1285 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 DMRTA1Q5VZB9 504 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 FRG2Q64ET8 278 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 PLAG1Q6DJT9 500 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 OR4C11Q6IEV9 310 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 EMBQ6PCB8 327 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 SCIMPQ6UWF3 145 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 IGFL2Q6UWQ7 119 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 IGFL3Q6UXB1 125 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 ISLR2Q6UXK2 745 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 ZYG11AQ6WRX3 759 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 RIPOR1Q6ZS17 1223 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 Q6ZS92 163 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 CHSY3Q70JA7 882 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 CRLF3Q8IUI8 442 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 BEST3Q8N1M1 668 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 ZADH2Q8N4Q0 377 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 CISD2Q8N5K1 135 aaKnown RBP7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 CCNYL1Q8N7R7 359 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 CCDC63Q8NA47 563 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 DNAJB14Q8TBM8 379 aa7.18□□□□□ -1.26
HMGB3P1-201ENST00000393368 CPT1CQ8TCG5 803 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms