RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 TRAV18A0A075B6X5 111 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 A0A1B0GW15 77 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 TMEM150CB9EJG8 249 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 ZNF701M0R085 212 aaPredicted RBP3.37□□□□□ -1.87
XRN1-202ENST00000392981 ZNF197O14709 1029 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 CHADO15335 359 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 SRGAP3O43295 1099 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 ATG13O75143 517 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 CXCL14O95715 111 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 SPATA31C1P0DKV0 1188 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 AMD1P17707 334 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 PCK1P35558 622 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 SLC7A2P52569 658 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 ATP12AP54707 1039 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 ARPC4P59998 168 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 DLK1P80370 383 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 CXCL9Q07325 125 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 SLAQ13239 276 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 FLOT2Q14254 428 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 C2orf68Q2NKX9 166 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 ATP13A5Q4VNC0 1218 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 SMUG1Q53HV7 270 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 KIAA1755Q5JYT7 1200 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 LRRC66Q68CR7 880 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 TMEM71Q6P5X7 295 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 TMEM64Q6YI46 380 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 C17orf107Q6ZR85 190 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 ST13P4Q8IZP2 240 aaPredicted RBP3.37□□□□□ -1.87
XRN1-202ENST00000392981 ARHGAP24Q8N264 748 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 THAP8Q8NA92 274 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 FAM71CQ8NEG0 241 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 LKAAEAR1Q8TD35 194 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 MITD1Q8WV92 249 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 DAZLQ92904 295 aaKnown RBP3.37□□□□□ -1.87
XRN1-202ENST00000392981 HMCESQ96FZ2 354 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 LOXL4Q96JB6 756 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 CAPZA3Q96KX2 299 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 ZNF347Q96SE7 839 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 FMO2Q99518 471 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 PRMT1Q99873 361 aaKnown RBP3.37□□□□□ -1.87
XRN1-202ENST00000392981 FTHL17Q9BXU8 183 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 B3GNT4Q9C0J1 378 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 TMEM39BQ9GZU3 492 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 ADA2Q9NZK5 511 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 ABI3Q9P2A4 366 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 HMGXB4Q9UGU5 601 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 LNPEPQ9UIQ6 1025 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 TBC1D24Q9ULP9 559 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 CAMSAP1Q5T5Y3 1602 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 ALKQ9UM73 1620 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 CFAP54Q96N23 3096 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 STX7O15400 261 aaKnown RBP3.37□□□□□ -1.87
XRN1-202ENST00000392981 FAM20BO75063 409 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 OR2T7P0C7T2 308 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 PMCHP20382 165 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 MSH3P20585 1137 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 EPHA2P29317 976 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 ATP1B3P54709 279 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 DR1Q01658 176 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 CYLC2Q14093 348 aaPredicted RBP3.37□□□□□ -1.87
XRN1-202ENST00000392981 CYTH1Q15438 398 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 PAGE2BQ5JRK9 111 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 MIIPQ5JXC2 388 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 PMS2CLQ68D20 193 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 Q6ZPB1 254 aaPredicted RBP3.37□□□□□ -1.87
XRN1-202ENST00000392981 PARS2Q7L3T8 475 aaKnown RBP3.37□□□□□ -1.87
XRN1-202ENST00000392981 TMPRSS11BQ86T26 416 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 MAB21L3Q8N8X9 362 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 MYCBPAPQ8TBZ2 947 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 RND1Q92730 232 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 SLCO2A1Q92959 643 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 HAVCR1Q96D42 359 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 KIRREL1Q96J84 757 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 PDLIM2Q96JY6 352 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 GLT1D1Q96MS3 346 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 PIGQQ9BRB3 760 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 NMNAT2Q9BZQ4 307 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 NSUN3Q9H649 340 aaKnown RBP3.37□□□□□ -1.87
XRN1-202ENST00000392981 ANKRA2Q9H9E1 313 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 SEBOXQ9HB31 216 aaPredicted RBP3.37□□□□□ -1.87
XRN1-202ENST00000392981 TRIM10Q9UDY6 481 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 ETV7Q9Y603 341 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 KDM5AP29375 1690 aaKnown RBP3.37□□□□□ -1.87
XRN1-202ENST00000392981 CRYBG1Q9Y4K1 1723 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 TRAV6A0A075B6T7 132 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 A0A1W2PPV4 95 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 VPS37CA5D8V6 355 aaPredicted RBP3.36□□□□□ -1.87
XRN1-202ENST00000392981 C5orf52A6NGY3 159 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 PDZK1P1A8MUH7 402 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 UBE2Q2LH0YL09 131 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 ANKRD28O15084 1053 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 ADAM12O43184 909 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 JAK2O60674 1132 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 SPAG6O75602 509 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 ERCC1P07992 297 aaPredicted RBP3.36□□□□□ -1.87
XRN1-202ENST00000392981 ITGAMP11215 1152 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 GATA3P23771 443 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 PSMA2P25787 234 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 OTX2P32243 289 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 LHX1P48742 406 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms