RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 GRSF1Q12849 480 aaKnown RBP eCLIP24.38■■□□□ 1.49
SMARCD3-203ENST00000392811 KRT33BQ14525 404 aa24.38■■□□□ 1.49
SMARCD3-203ENST00000392811 CRB2Q5IJ48 1285 aa24.38■■□□□ 1.49
SMARCD3-203ENST00000392811 OR2L8Q8NGY9 312 aa24.38■■□□□ 1.49
SMARCD3-203ENST00000392811 LZICQ8WZA0 190 aa24.38■■□□□ 1.49
SMARCD3-203ENST00000392811 ZNF566Q969W8 418 aa24.38■■□□□ 1.49
SMARCD3-203ENST00000392811 C1QTNF7Q9BXJ2 289 aa24.38■■□□□ 1.49
SMARCD3-203ENST00000392811 LHPPQ9H008 270 aa24.38■■□□□ 1.49
SMARCD3-203ENST00000392811 NDRG4Q9ULP0 352 aaKnown RBP24.38■■□□□ 1.49
SMARCD3-203ENST00000392811 LYVE1Q9Y5Y7 322 aa24.38■■□□□ 1.49
SMARCD3-203ENST00000392811 HEATR5BQ9P2D3 2071 aa24.38■■□□□ 1.49
SMARCD3-203ENST00000392811 TBC1D3DA0A087WVF3 549 aa24.37■■□□□ 1.49
SMARCD3-203ENST00000392811 TBC1D3IA0A087WXS9 549 aa24.37■■□□□ 1.49
SMARCD3-203ENST00000392811 TBC1D3EA0A087X179 549 aa24.37■■□□□ 1.49
SMARCD3-203ENST00000392811 TBC1D3KA0A087X1G2 549 aa24.37■■□□□ 1.49
SMARCD3-203ENST00000392811 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.37■■□□□ 1.49
SMARCD3-203ENST00000392811 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.37■■□□□ 1.49
SMARCD3-203ENST00000392811 TBC1D3FA6NER0 549 aaPredicted RBP24.37■■□□□ 1.49
SMARCD3-203ENST00000392811 PRAMEF25A6NGN4 478 aa24.37■■□□□ 1.49
SMARCD3-203ENST00000392811 PDZK1P1A8MUH7 402 aa24.37■■□□□ 1.49
SMARCD3-203ENST00000392811 TBC1D3LB9A6J9 549 aa24.37■■□□□ 1.49
SMARCD3-203ENST00000392811 PTGES3LE9PB15 166 aa24.37■■□□□ 1.49
SMARCD3-203ENST00000392811 ADAM23O75077 832 aa24.37■■□□□ 1.49
SMARCD3-203ENST00000392811 TBC1D3HP0C7X1 549 aa24.37■■□□□ 1.49
SMARCD3-203ENST00000392811 MANFP55145 182 aaKnown RBP24.37■■□□□ 1.49
SMARCD3-203ENST00000392811 PCBP3P57721 371 aaKnown RBP24.37■■□□□ 1.49
SMARCD3-203ENST00000392811 DSTNP60981 165 aa24.37■■□□□ 1.49
SMARCD3-203ENST00000392811 TBC1D3GQ6DHY5 549 aa24.37■■□□□ 1.49
SMARCD3-203ENST00000392811 TBC1D3CQ6IPX1 549 aa24.37■■□□□ 1.49
SMARCD3-203ENST00000392811 SDE2Q6IQ49 451 aa24.37■■□□□ 1.49
SMARCD3-203ENST00000392811 FAM20CQ8IXL6 584 aa24.37■■□□□ 1.49
SMARCD3-203ENST00000392811 TBC1D3Q8IZP1 549 aaPredicted RBP24.37■■□□□ 1.49
SMARCD3-203ENST00000392811 AMER3Q8N944 861 aa24.37■■□□□ 1.49
SMARCD3-203ENST00000392811 CREB3L4Q8TEY5 395 aa24.37■■□□□ 1.49
SMARCD3-203ENST00000392811 AASSQ9UDR5 926 aa24.37■■□□□ 1.49
SMARCD3-203ENST00000392811 HSPE1-MOB4S4R3N1 261 aa24.37■■□□□ 1.49
SMARCD3-203ENST00000392811 PRAMEF33A0A0G2JMD5 474 aa24.37■■□□□ 1.49
SMARCD3-203ENST00000392811 SLC31A1O15431 190 aa24.37■■□□□ 1.49
SMARCD3-203ENST00000392811 XPNPEP2O43895 674 aa24.37■■□□□ 1.49
SMARCD3-203ENST00000392811 ANGPTL1O95841 491 aa24.37■■□□□ 1.49
SMARCD3-203ENST00000392811 SERPIND1P05546 499 aa24.37■■□□□ 1.49
SMARCD3-203ENST00000392811 DLX2Q07687 328 aaPredicted RBP24.37■■□□□ 1.49
SMARCD3-203ENST00000392811 IL17RCQ8NAC3 791 aa24.37■■□□□ 1.49
SMARCD3-203ENST00000392811 OR52E1Q8NGJ3 308 aa24.37■■□□□ 1.49
SMARCD3-203ENST00000392811 DCUN1D5Q9BTE7 237 aa24.37■■□□□ 1.49
SMARCD3-203ENST00000392811 PRDM8Q9NQV8 689 aa24.37■■□□□ 1.49
SMARCD3-203ENST00000392811 TMEM184CQ9NVA4 438 aa24.37■■□□□ 1.49
SMARCD3-203ENST00000392811 TEX10Q9NXF1 929 aaPredicted RBP24.37■■□□□ 1.49
SMARCD3-203ENST00000392811 ANGPT4Q9Y264 503 aa24.37■■□□□ 1.49
SMARCD3-203ENST00000392811 ZBTB32Q9Y2Y4 487 aaPredicted RBP24.37■■□□□ 1.49
SMARCD3-203ENST00000392811 A0A0G2JN53 185 aa24.36■■□□□ 1.49
SMARCD3-203ENST00000392811 A0A1W2PQF6 199 aa24.36■■□□□ 1.49
SMARCD3-203ENST00000392811 TNFRSF11BO00300 401 aa24.36■■□□□ 1.49
SMARCD3-203ENST00000392811 ADAMDEC1O15204 470 aa24.36■■□□□ 1.49
SMARCD3-203ENST00000392811 CLEC3AO75596 197 aa24.36■■□□□ 1.49
SMARCD3-203ENST00000392811 CDK4P11802 303 aa24.36■■□□□ 1.49
SMARCD3-203ENST00000392811 UAP1L1Q3KQV9 507 aa24.36■■□□□ 1.49
SMARCD3-203ENST00000392811 CYP27C1Q4G0S4 372 aa24.36■■□□□ 1.49
SMARCD3-203ENST00000392811 KIAA1614Q5VZ46 1190 aa24.36■■□□□ 1.49
SMARCD3-203ENST00000392811 SAXO2Q658L1 398 aa24.36■■□□□ 1.49
SMARCD3-203ENST00000392811 GTF2IRD2BQ6EKJ0 949 aa24.36■■□□□ 1.49
SMARCD3-203ENST00000392811 B3GNT8Q7Z7M8 397 aa24.36■■□□□ 1.49
SMARCD3-203ENST00000392811 GTF2IRD2Q86UP8 949 aa24.36■■□□□ 1.49
SMARCD3-203ENST00000392811 NATD1Q8N6N6 113 aa24.36■■□□□ 1.49
SMARCD3-203ENST00000392811 EXOSC8Q96B26 276 aaKnown RBP24.36■■□□□ 1.49
SMARCD3-203ENST00000392811 NEURL3Q96EH8 262 aa24.36■■□□□ 1.49
SMARCD3-203ENST00000392811 ZNF300Q96RE9 604 aaPredicted RBP24.36■■□□□ 1.49
SMARCD3-203ENST00000392811 NODALQ96S42 347 aa24.36■■□□□ 1.49
SMARCD3-203ENST00000392811 ZNF347Q96SE7 839 aa24.36■■□□□ 1.49
SMARCD3-203ENST00000392811 APOL4Q9BPW4 351 aa24.36■■□□□ 1.49
SMARCD3-203ENST00000392811 RAB11FIP5Q9BXF6 653 aa24.36■■□□□ 1.49
SMARCD3-203ENST00000392811 ADAM29Q9UKF5 820 aa24.36■■□□□ 1.49
SMARCD3-203ENST00000392811 NAALAD2Q9Y3Q0 740 aa24.36■■□□□ 1.49
SMARCD3-203ENST00000392811 TMX2-CTNND1H3BSU7 103 aa24.35■■□□□ 1.49
SMARCD3-203ENST00000392811 CACNB4O00305 520 aaPredicted RBP24.35■■□□□ 1.49
SMARCD3-203ENST00000392811 PPM1DO15297 605 aa24.35■■□□□ 1.49
SMARCD3-203ENST00000392811 KCNJ13O60928 360 aa24.35■■□□□ 1.49
SMARCD3-203ENST00000392811 FMO3P31513 532 aa24.35■■□□□ 1.49
SMARCD3-203ENST00000392811 PCBP4P57723 403 aaKnown RBP24.35■■□□□ 1.49
SMARCD3-203ENST00000392811 PPP2CBP62714 309 aa24.35■■□□□ 1.49
SMARCD3-203ENST00000392811 RPS26P62854 115 aaKnown RBP24.35■■□□□ 1.49
SMARCD3-203ENST00000392811 PPP2CAP67775 309 aa24.35■■□□□ 1.49
SMARCD3-203ENST00000392811 ADAM15Q13444 863 aa24.35■■□□□ 1.49
SMARCD3-203ENST00000392811 TUBA3CQ13748 450 aa24.35■■□□□ 1.49
SMARCD3-203ENST00000392811 RAB30Q15771 203 aa24.35■■□□□ 1.49
SMARCD3-203ENST00000392811 TEFMQ96QE5 360 aaKnown RBP24.35■■□□□ 1.49
SMARCD3-203ENST00000392811 AICDAQ9GZX7 198 aa24.35■■□□□ 1.49
SMARCD3-203ENST00000392811 DDX31Q9H8H2 851 aaKnown RBP24.35■■□□□ 1.49
SMARCD3-203ENST00000392811 THSD1Q9NS62 852 aa24.35■■□□□ 1.49
SMARCD3-203ENST00000392811 TMEM9Q9P0T7 183 aa24.35■■□□□ 1.49
SMARCD3-203ENST00000392811 ZNF451Q9Y4E5 1061 aa24.35■■□□□ 1.49
SMARCD3-203ENST00000392811 SNX5Q9Y5X3 404 aa24.35■■□□□ 1.49
SMARCD3-203ENST00000392811 UNC80Q8N2C7 3258 aa24.35■■□□□ 1.49
SMARCD3-203ENST00000392811 IFNA14P01570 189 aa24.35■■□□□ 1.49
SMARCD3-203ENST00000392811 HOXB2P14652 356 aa24.35■■□□□ 1.49
SMARCD3-203ENST00000392811 PLA2G16P53816 162 aa24.35■■□□□ 1.49
SMARCD3-203ENST00000392811 NUP107P57740 925 aa24.35■■□□□ 1.49
SMARCD3-203ENST00000392811 NPRL3Q12980 569 aa24.35■■□□□ 1.49
SMARCD3-203ENST00000392811 HSPB3Q12988 150 aa24.35■■□□□ 1.49
SMARCD3-203ENST00000392811 LAIR1Q6GTX8 287 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms