RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 FGFBP1Q14512 234 aa18.97■□□□□ 0.63
SHANK1-203ENST00000391813 SLC27A4Q6P1M0 643 aa18.97■□□□□ 0.63
SHANK1-203ENST00000391813 GID4Q8IVV7 300 aa18.97■□□□□ 0.63
SHANK1-203ENST00000391813 GPSM3Q9Y4H4 160 aa18.97■□□□□ 0.63
SHANK1-203ENST00000391813 MYH15Q9Y2K3 1946 aa18.97■□□□□ 0.63
SHANK1-203ENST00000391813 ANKRD33BA6NCL7 494 aa18.97■□□□□ 0.63
SHANK1-203ENST00000391813 J3QLW9 94 aa18.97■□□□□ 0.63
SHANK1-203ENST00000391813 M0R036 132 aa18.97■□□□□ 0.63
SHANK1-203ENST00000391813 ZNF19P17023 458 aa18.97■□□□□ 0.63
SHANK1-203ENST00000391813 AGTR1P30556 359 aa18.97■□□□□ 0.63
SHANK1-203ENST00000391813 AGTR2P50052 363 aa18.97■□□□□ 0.63
SHANK1-203ENST00000391813 E2F1Q01094 437 aa18.97■□□□□ 0.63
SHANK1-203ENST00000391813 PLA2G4EQ3MJ16 856 aa18.97■□□□□ 0.63
SHANK1-203ENST00000391813 CCSAPQ6IQ19 270 aaPredicted RBP18.97■□□□□ 0.63
SHANK1-203ENST00000391813 MSANTD1Q6ZTZ1 278 aa18.97■□□□□ 0.63
SHANK1-203ENST00000391813 SCAMP5Q8TAC9 235 aa18.97■□□□□ 0.63
SHANK1-203ENST00000391813 ACDQ96AP0 544 aa18.97■□□□□ 0.63
SHANK1-203ENST00000391813 TMEM125Q96AQ2 219 aa18.97■□□□□ 0.63
SHANK1-203ENST00000391813 SNX18Q96RF0 628 aa18.97■□□□□ 0.63
SHANK1-203ENST00000391813 SLC30A3Q99726 388 aa18.97■□□□□ 0.63
SHANK1-203ENST00000391813 MROQ9BYG7 248 aa18.97■□□□□ 0.63
SHANK1-203ENST00000391813 EDARQ9UNE0 448 aa18.97■□□□□ 0.63
SHANK1-203ENST00000391813 KCTD3Q9Y597 815 aa18.97■□□□□ 0.63
SHANK1-203ENST00000391813 BCKDHAP12694 445 aa18.96■□□□□ 0.63
SHANK1-203ENST00000391813 C1QTNF8P60827 252 aa18.96■□□□□ 0.63
SHANK1-203ENST00000391813 ZNF252P-AS1Q0IIN9 211 aa18.96■□□□□ 0.63
SHANK1-203ENST00000391813 ENPP6Q6UWR7 440 aa18.96■□□□□ 0.63
SHANK1-203ENST00000391813 OR7G1Q8NGA0 311 aa18.96■□□□□ 0.63
SHANK1-203ENST00000391813 SGCDQ92629 289 aa18.96■□□□□ 0.63
SHANK1-203ENST00000391813 OR4K3Q96R72 315 aa18.96■□□□□ 0.63
SHANK1-203ENST00000391813 PCYT2Q99447 389 aa18.96■□□□□ 0.63
SHANK1-203ENST00000391813 LYRM1O43325 122 aa18.96■□□□□ 0.63
SHANK1-203ENST00000391813 LCKP06239 509 aa18.96■□□□□ 0.63
SHANK1-203ENST00000391813 SNRPD2P62316 118 aaKnown RBP18.96■□□□□ 0.63
SHANK1-203ENST00000391813 TMEM220Q6QAJ8 160 aa18.96■□□□□ 0.63
SHANK1-203ENST00000391813 SIMC1Q8NDZ2 872 aa18.96■□□□□ 0.63
SHANK1-203ENST00000391813 FCAMRQ8WWV6 532 aa18.96■□□□□ 0.63
SHANK1-203ENST00000391813 MOCOSQ96EN8 888 aa18.96■□□□□ 0.63
SHANK1-203ENST00000391813 C4AP0C0L4 1744 aa18.96■□□□□ 0.63
SHANK1-203ENST00000391813 OR1I1O60431 355 aa18.96■□□□□ 0.63
SHANK1-203ENST00000391813 RFPL3O75679 317 aa18.96■□□□□ 0.63
SHANK1-203ENST00000391813 S1PR4O95977 384 aa18.96■□□□□ 0.63
SHANK1-203ENST00000391813 MAP3K8P41279 467 aa18.96■□□□□ 0.63
SHANK1-203ENST00000391813 ZNF155Q12901 538 aaPredicted RBP18.96■□□□□ 0.63
SHANK1-203ENST00000391813 SP140Q13342 867 aa18.96■□□□□ 0.63
SHANK1-203ENST00000391813 NOXRED1Q6NXP6 359 aa18.96■□□□□ 0.63
SHANK1-203ENST00000391813 HSPA12BQ96MM6 686 aa18.96■□□□□ 0.63
SHANK1-203ENST00000391813 TRIB3Q96RU7 358 aa18.96■□□□□ 0.63
SHANK1-203ENST00000391813 CD180Q99467 661 aa18.96■□□□□ 0.63
SHANK1-203ENST00000391813 HS3ST4Q9Y661 456 aa18.96■□□□□ 0.63
SHANK1-203ENST00000391813 CREBL2O60519 120 aaPredicted RBP18.96■□□□□ 0.63
SHANK1-203ENST00000391813 UQCRC1P31930 480 aa18.96■□□□□ 0.63
SHANK1-203ENST00000391813 MAGEA11P43364 429 aa18.96■□□□□ 0.63
SHANK1-203ENST00000391813 ALDH3B2P48448 385 aa18.96■□□□□ 0.63
SHANK1-203ENST00000391813 NCBP2P52298 156 aaKnown RBP eCLIP18.96■□□□□ 0.63
SHANK1-203ENST00000391813 TRAM2Q15035 370 aa18.96■□□□□ 0.63
SHANK1-203ENST00000391813 FAM198BQ6UWH4 519 aa18.96■□□□□ 0.63
SHANK1-203ENST00000391813 GALNTL5Q7Z4T8 443 aa18.96■□□□□ 0.63
SHANK1-203ENST00000391813 FAM109AQ8N4B1 249 aa18.96■□□□□ 0.63
SHANK1-203ENST00000391813 SNAPC3Q92966 411 aa18.96■□□□□ 0.63
SHANK1-203ENST00000391813 ZCWPW2A0A1B0GU75 182 aa18.95■□□□□ 0.62
SHANK1-203ENST00000391813 STBD1O95210 358 aa18.95■□□□□ 0.62
SHANK1-203ENST00000391813 GNALP38405 381 aa18.95■□□□□ 0.62
SHANK1-203ENST00000391813 AFF1P51825 1210 aaKnown RBP18.95■□□□□ 0.62
SHANK1-203ENST00000391813 PON3Q15166 354 aa18.95■□□□□ 0.62
SHANK1-203ENST00000391813 COX18Q8N8Q8 333 aa18.95■□□□□ 0.62
SHANK1-203ENST00000391813 FEVQ99581 238 aa18.95■□□□□ 0.62
SHANK1-203ENST00000391813 NLGN3Q9NZ94 848 aa18.95■□□□□ 0.62
SHANK1-203ENST00000391813 PGAP2Q9UHJ9 254 aa18.95■□□□□ 0.62
SHANK1-203ENST00000391813 ZFR2Q9UPR6 939 aaKnown RBP18.95■□□□□ 0.62
SHANK1-203ENST00000391813 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.95■□□□□ 0.62
SHANK1-203ENST00000391813 C2orf92A0A1B0GVN3 265 aa18.95■□□□□ 0.62
SHANK1-203ENST00000391813 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.95■□□□□ 0.62
SHANK1-203ENST00000391813 MEIOCA2RUB1 952 aa18.95■□□□□ 0.62
SHANK1-203ENST00000391813 LRRTM2O43300 516 aa18.95■□□□□ 0.62
SHANK1-203ENST00000391813 TGFB1P01137 390 aa18.95■□□□□ 0.62
SHANK1-203ENST00000391813 CSF2RAP15509 400 aa18.95■□□□□ 0.62
SHANK1-203ENST00000391813 FNTBP49356 437 aa18.95■□□□□ 0.62
SHANK1-203ENST00000391813 SLC22A10Q63ZE4 541 aa18.95■□□□□ 0.62
SHANK1-203ENST00000391813 NELL2Q99435 816 aa18.95■□□□□ 0.62
SHANK1-203ENST00000391813 FBXW2Q9UKT8 454 aa18.95■□□□□ 0.62
SHANK1-203ENST00000391813 RBM7Q9Y580 266 aaKnown RBP18.95■□□□□ 0.62
SHANK1-203ENST00000391813 CMPK1P30085 196 aa18.95■□□□□ 0.62
SHANK1-203ENST00000391813 DGKEP52429 567 aa18.95■□□□□ 0.62
SHANK1-203ENST00000391813 SH3BP2P78314 561 aa18.95■□□□□ 0.62
SHANK1-203ENST00000391813 NFE2L1Q14494 772 aa18.95■□□□□ 0.62
SHANK1-203ENST00000391813 EXOC3L2Q2M3D2 409 aa18.95■□□□□ 0.62
SHANK1-203ENST00000391813 DTWD1Q8N5C7 304 aa18.95■□□□□ 0.62
SHANK1-203ENST00000391813 SH3RF2Q8TEC5 729 aa18.95■□□□□ 0.62
SHANK1-203ENST00000391813 IGSF21Q96ID5 467 aa18.95■□□□□ 0.62
SHANK1-203ENST00000391813 MGAT4CQ9UBM8 478 aa18.95■□□□□ 0.62
SHANK1-203ENST00000391813 PCDHGA8Q9Y5G5 932 aa18.95■□□□□ 0.62
SHANK1-203ENST00000391813 GOLGA4Q13439 2230 aaKnown RBP18.95■□□□□ 0.62
SHANK1-203ENST00000391813 STRCQ7RTU9 1775 aa18.95■□□□□ 0.62
SHANK1-203ENST00000391813 PAHP00439 452 aa18.94■□□□□ 0.62
SHANK1-203ENST00000391813 IFNA21P01568 189 aa18.94■□□□□ 0.62
SHANK1-203ENST00000391813 IL32P24001 234 aa18.94■□□□□ 0.62
SHANK1-203ENST00000391813 GJA5P36382 358 aa18.94■□□□□ 0.62
SHANK1-203ENST00000391813 CLDN8P56748 225 aa18.94■□□□□ 0.62
SHANK1-203ENST00000391813 ZNF763Q0D2J5 394 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms