RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 CHRM5P08912 532 aaPredicted RBP10.35□□□□□ -0.75
NEDD9-201ENST00000379433 FAM58BPP0C7Q3 252 aa10.35□□□□□ -0.75
NEDD9-201ENST00000379433 KCNJ5P48544 419 aa10.35□□□□□ -0.75
NEDD9-201ENST00000379433 PNLIPRP1P54315 467 aa10.35□□□□□ -0.75
NEDD9-201ENST00000379433 PPP2CBP62714 309 aa10.35□□□□□ -0.75
NEDD9-201ENST00000379433 PPP2CAP67775 309 aa10.35□□□□□ -0.75
NEDD9-201ENST00000379433 FAM98BQ52LJ0 330 aaKnown RBP10.35□□□□□ -0.75
NEDD9-201ENST00000379433 PRAMEF14Q5SWL7 426 aa10.35□□□□□ -0.75
NEDD9-201ENST00000379433 PRAMEF13Q5VWM6 474 aa10.35□□□□□ -0.75
NEDD9-201ENST00000379433 OR52E8Q6IFG1 317 aa10.35□□□□□ -0.75
NEDD9-201ENST00000379433 HACD2Q6Y1H2 254 aa10.35□□□□□ -0.75
NEDD9-201ENST00000379433 ZNF852Q6ZMS4 543 aa10.35□□□□□ -0.75
NEDD9-201ENST00000379433 COMMD6Q7Z4G1 85 aa10.35□□□□□ -0.75
NEDD9-201ENST00000379433 ZNF761Q86XN6 746 aaPredicted RBP10.35□□□□□ -0.75
NEDD9-201ENST00000379433 FAM129CQ86XR2 697 aa10.35□□□□□ -0.75
NEDD9-201ENST00000379433 CMTM7Q96FZ5 175 aa10.35□□□□□ -0.75
NEDD9-201ENST00000379433 DUSP26Q9BV47 211 aa10.35□□□□□ -0.75
NEDD9-201ENST00000379433 SLC29A3Q9BZD2 475 aa10.35□□□□□ -0.75
NEDD9-201ENST00000379433 ZDHHC5Q9C0B5 715 aa10.35□□□□□ -0.75
NEDD9-201ENST00000379433 MIEF1Q9NQG6 463 aa10.35□□□□□ -0.75
NEDD9-201ENST00000379433 CACNA1IQ9P0X4 2223 aa10.35□□□□□ -0.75
NEDD9-201ENST00000379433 PLXNB3Q9ULL4 1909 aa10.34□□□□□ -0.75
NEDD9-201ENST00000379433 KCNE1BA0A087WTH5 132 aa10.34□□□□□ -0.75
NEDD9-201ENST00000379433 OR6C74A6NCV1 312 aa10.34□□□□□ -0.75
NEDD9-201ENST00000379433 NPC1O15118 1278 aa10.34□□□□□ -0.75
NEDD9-201ENST00000379433 ACADMP11310 421 aa10.34□□□□□ -0.75
NEDD9-201ENST00000379433 ACPPP15309 386 aa10.34□□□□□ -0.75
NEDD9-201ENST00000379433 ACSL1P33121 698 aa10.34□□□□□ -0.75
NEDD9-201ENST00000379433 CLDN8P56748 225 aa10.34□□□□□ -0.75
NEDD9-201ENST00000379433 MYBPC1Q00872 1141 aa10.34□□□□□ -0.75
NEDD9-201ENST00000379433 HIST2H2ACQ16777 129 aaPredicted RBP10.34□□□□□ -0.75
NEDD9-201ENST00000379433 TMEM196Q5HYL7 178 aa10.34□□□□□ -0.75
NEDD9-201ENST00000379433 HIST2H2AA3Q6FI13 130 aa10.34□□□□□ -0.75
NEDD9-201ENST00000379433 ENPP7Q6UWV6 458 aa10.34□□□□□ -0.75
NEDD9-201ENST00000379433 KRT74Q7RTS7 529 aa10.34□□□□□ -0.75
NEDD9-201ENST00000379433 ABCA7Q8IZY2 2146 aa10.34□□□□□ -0.75
NEDD9-201ENST00000379433 PARP8Q8N3A8 854 aa10.34□□□□□ -0.75
NEDD9-201ENST00000379433 TMEM145Q8NBT3 493 aa10.34□□□□□ -0.75
NEDD9-201ENST00000379433 OR4A15Q8NGL6 344 aa10.34□□□□□ -0.75
NEDD9-201ENST00000379433 OR52J3Q8NH60 311 aa10.34□□□□□ -0.75
NEDD9-201ENST00000379433 UBTD2Q8WUN7 234 aa10.34□□□□□ -0.75
NEDD9-201ENST00000379433 TMBIM1Q969X1 311 aa10.34□□□□□ -0.75
NEDD9-201ENST00000379433 BCL7BQ9BQE9 202 aa10.34□□□□□ -0.75
NEDD9-201ENST00000379433 SP140LQ9H930 580 aa10.34□□□□□ -0.75
NEDD9-201ENST00000379433 ZFR2Q9UPR6 939 aaKnown RBP10.34□□□□□ -0.75
NEDD9-201ENST00000379433 ZNF451Q9Y4E5 1061 aa10.34□□□□□ -0.75
NEDD9-201ENST00000379433 HEATR5BQ9P2D3 2071 aa10.34□□□□□ -0.75
NEDD9-201ENST00000379433 ANKDD1BA6NHY2 528 aa10.34□□□□□ -0.75
NEDD9-201ENST00000379433 QSOX1O00391 747 aa10.34□□□□□ -0.75
NEDD9-201ENST00000379433 HS6ST1O60243 411 aa10.34□□□□□ -0.75
NEDD9-201ENST00000379433 BMP10O95393 424 aa10.34□□□□□ -0.75
NEDD9-201ENST00000379433 CCNA2P20248 432 aa10.34□□□□□ -0.75
NEDD9-201ENST00000379433 POLR2IP36954 125 aaKnown RBP10.34□□□□□ -0.75
NEDD9-201ENST00000379433 OR1E2P47887 323 aa10.34□□□□□ -0.75
NEDD9-201ENST00000379433 LCN8Q6JVE9 175 aa10.34□□□□□ -0.75
NEDD9-201ENST00000379433 TTC33Q6PID6 262 aaPredicted RBP10.34□□□□□ -0.75
NEDD9-201ENST00000379433 SLCO4C1Q6ZQN7 724 aa10.34□□□□□ -0.75
NEDD9-201ENST00000379433 PLEKHM3Q6ZWE6 761 aa10.34□□□□□ -0.75
NEDD9-201ENST00000379433 SFTPA2Q8IWL1 248 aa10.34□□□□□ -0.75
NEDD9-201ENST00000379433 CATSPER1Q8NEC5 780 aa10.34□□□□□ -0.75
NEDD9-201ENST00000379433 SLC5A11Q8WWX8 675 aa10.34□□□□□ -0.75
NEDD9-201ENST00000379433 RLN3Q8WXF3 142 aa10.34□□□□□ -0.75
NEDD9-201ENST00000379433 UCN3Q969E3 161 aa10.34□□□□□ -0.75
NEDD9-201ENST00000379433 MRPL38Q96DV4 380 aaKnown RBP10.34□□□□□ -0.75
NEDD9-201ENST00000379433 SIPA1Q96FS4 1042 aa10.34□□□□□ -0.75
NEDD9-201ENST00000379433 WACQ9BTA9 647 aa10.34□□□□□ -0.75
NEDD9-201ENST00000379433 COQ3Q9NZJ6 369 aa10.34□□□□□ -0.75
NEDD9-201ENST00000379433 AKAP7Q9P0M2 348 aaPredicted RBP10.34□□□□□ -0.75
NEDD9-201ENST00000379433 DMTF1Q9Y222 760 aa10.34□□□□□ -0.75
NEDD9-201ENST00000379433 AP1M2Q9Y6Q5 423 aa10.34□□□□□ -0.75
NEDD9-201ENST00000379433 LRRK1Q38SD2 2015 aa10.34□□□□□ -0.75
NEDD9-201ENST00000379433 CLOCKO15516 846 aa10.33□□□□□ -0.76
NEDD9-201ENST00000379433 C6orf47O95873 294 aa10.33□□□□□ -0.76
NEDD9-201ENST00000379433 COL9A1P20849 921 aa10.33□□□□□ -0.76
NEDD9-201ENST00000379433 PRKAG1P54619 331 aa10.33□□□□□ -0.76
NEDD9-201ENST00000379433 NAA20P61599 178 aa10.33□□□□□ -0.76
NEDD9-201ENST00000379433 HSPB3Q12988 150 aa10.33□□□□□ -0.76
NEDD9-201ENST00000379433 TMEM164Q5U3C3 297 aa10.33□□□□□ -0.76
NEDD9-201ENST00000379433 UGT2A3Q6UWM9 527 aa10.33□□□□□ -0.76
NEDD9-201ENST00000379433 TMIGD1Q6UXZ0 262 aa10.33□□□□□ -0.76
NEDD9-201ENST00000379433 OLIG3Q7RTU3 272 aa10.33□□□□□ -0.76
NEDD9-201ENST00000379433 C17orf64Q86WR6 236 aa10.33□□□□□ -0.76
NEDD9-201ENST00000379433 ZC3H7AQ8IWR0 971 aaKnown RBP10.33□□□□□ -0.76
NEDD9-201ENST00000379433 NRSN1Q8IZ57 195 aa10.33□□□□□ -0.76
NEDD9-201ENST00000379433 L3MBTL4Q8NA19 623 aa10.33□□□□□ -0.76
NEDD9-201ENST00000379433 OR4E2Q8NGC2 313 aa10.33□□□□□ -0.76
NEDD9-201ENST00000379433 FANK1Q8TC84 345 aa10.33□□□□□ -0.76
NEDD9-201ENST00000379433 RAD51AP1Q96B01 352 aa10.33□□□□□ -0.76
NEDD9-201ENST00000379433 EXOSC8Q96B26 276 aaKnown RBP10.33□□□□□ -0.76
NEDD9-201ENST00000379433 CENPNQ96H22 339 aaPredicted RBP10.33□□□□□ -0.76
NEDD9-201ENST00000379433 UHRF1Q96T88 793 aaPredicted RBP10.33□□□□□ -0.76
NEDD9-201ENST00000379433 RAD18Q9NS91 495 aa10.33□□□□□ -0.76
NEDD9-201ENST00000379433 PAQR5Q9NXK6 330 aaPredicted RBP10.33□□□□□ -0.76
NEDD9-201ENST00000379433 CLEC1BQ9P126 229 aa10.33□□□□□ -0.76
NEDD9-201ENST00000379433 ST14Q9Y5Y6 855 aa10.33□□□□□ -0.76
NEDD9-201ENST00000379433 PIAS3Q9Y6X2 628 aa10.33□□□□□ -0.76
NEDD9-201ENST00000379433 AQP12BA6NM10 295 aa10.33□□□□□ -0.76
NEDD9-201ENST00000379433 K7EQS6 105 aa10.33□□□□□ -0.76
NEDD9-201ENST00000379433 MEN1O00255 615 aa10.33□□□□□ -0.76
NEDD9-201ENST00000379433 CREG1O75629 220 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms