RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 MKRN2Q9H000 416 aaKnown RBP9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 C8orf33Q9H7E9 229 aaPredicted RBP9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 C1GALT1Q9NS00 363 aa9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 TMEM184CQ9NVA4 438 aa9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 ZSCAN32Q9NX65 697 aa9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 TAAR2Q9P1P5 351 aa9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 TMEFF2Q9UIK5 374 aaPredicted RBP9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 ABCG2Q9UNQ0 655 aa9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 WDR37Q9Y2I8 494 aa9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 CFAP20Q9Y6A4 193 aaKnown RBP9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 OTOGLQ3ZCN5 2332 aa9.99□□□□□ -0.81
POLR2J3-201ENST00000379340 TBC1D3DA0A087WVF3 549 aa9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 TBC1D3IA0A087WXS9 549 aa9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 TBC1D3EA0A087X179 549 aa9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 TBC1D3KA0A087X1G2 549 aa9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 TBC1D3FA6NER0 549 aaPredicted RBP9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 MYO1GB0I1T2 1018 aa9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 TBC1D3LB9A6J9 549 aa9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 H3BSA7 217 aa9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 H7BY64 318 aa9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 ADAMDEC1O15204 470 aa9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 JRKO75564 520 aa9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 KLF8O95600 359 aaPredicted RBP9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 CPNE6O95741 557 aa9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 TBX6O95947 436 aaPredicted RBP9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 GBAP04062 536 aa9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 NTRK1P04629 796 aa9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 NUDT7P0C024 238 aa9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 TBC1D3HP0C7X1 549 aa9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 DRD2P14416 443 aa9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 JUNBP17275 347 aaPredicted RBP9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 SHMT2P34897 504 aa9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 FRKP42685 505 aaPredicted RBP9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 MAGEA8P43361 318 aa9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 KCNJ10P78508 379 aa9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 VLDLRP98155 873 aa9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 MLC1Q15049 377 aa9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 MPEG1Q2M385 716 aa9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 IFI44LQ53G44 452 aa9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 CRB2Q5IJ48 1285 aa9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 ZNF691Q5VV52 312 aa9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 KDM4DQ6B0I6 523 aa9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 TBC1D3GQ6DHY5 549 aa9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 TBC1D3CQ6IPX1 549 aa9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 DUS1LQ6P1R4 473 aaKnown RBP9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 TBC1D3Q8IZP1 549 aaPredicted RBP9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 LINC01555Q8NAE3 123 aa9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 PIK3C3Q8NEB9 887 aa9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 ZNF420Q8TAQ5 688 aaPredicted RBP9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 KLK6Q92876 244 aa9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 ZNF566Q969W8 418 aa9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 CIDECQ96AQ7 238 aaPredicted RBP9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 TM4SF18Q96CE8 201 aa9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 SIPA1Q96FS4 1042 aa9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 MAGED4Q96JG8 741 aa9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 C7orf34Q96L11 122 aa9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 PRAP1Q96NZ9 151 aa9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 OR2M4Q96R27 311 aa9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 F2RL3Q96RI0 385 aa9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 SARGQ9BW04 601 aa9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 NPLQ9BXD5 320 aaPredicted RBP9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 SOX17Q9H6I2 414 aaPredicted RBP9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 EPS8L2Q9H6S3 715 aa9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 KIR3DX1Q9H7L2 352 aa9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 DDX31Q9H8H2 851 aaKnown RBP9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 THSD1Q9NS62 852 aa9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 ACSS1Q9NUB1 689 aaPredicted RBP9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 IMP3Q9NV31 184 aaKnown RBP9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 THUMPD1Q9NXG2 353 aaKnown RBP9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 EHD3Q9NZN3 535 aa9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 KCNK6Q9Y257 313 aa9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 SAMHD1Q9Y3Z3 626 aaKnown RBP9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 GPSM3Q9Y4H4 160 aa9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 PCDHGB3Q9Y5G1 929 aa9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 COLEC10Q9Y6Z7 277 aa9.98□□□□□ -0.81
POLR2J3-201ENST00000379340 A0A1W2PQF6 199 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 PDZK1P1A8MUH7 402 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 A8MVJ9 347 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 hCG_2039718K7EN88 272 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 BCKDKO14874 412 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 OR1F1O43749 312 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 ABCB7O75027 752 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 GUCY1B2O75343 617 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 DNAJB5O75953 348 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 C1QCP02747 245 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 FUCA1P04066 466 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 CCDC159P0C7I6 412 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 ETFAP13804 333 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 ETS2P15036 469 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 PSMB5P28074 263 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 CMPK1P30085 196 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 SOAT1P35610 550 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 AHRP35869 848 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 TSFMP43897 325 aaKnown RBP9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 DSTNP60981 165 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 CDK6Q00534 326 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 TUBA3CQ13748 450 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 IQCCQ4KMZ1 466 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 C6orf141Q5SZD1 244 aa9.97□□□□□ -0.81
POLR2J3-201ENST00000379340 SAXO2Q658L1 398 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms