RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 TTC29Q8NA56 475 aaPredicted RBP23.28■■□□□ 1.32
ECHDC3-201ENST00000379215 FAM47BQ8NA70 645 aa23.28■■□□□ 1.32
ECHDC3-201ENST00000379215 NUDT22Q9BRQ3 303 aa23.28■■□□□ 1.32
ECHDC3-201ENST00000379215 COL25A1Q9BXS0 654 aaPredicted RBP23.28■■□□□ 1.32
ECHDC3-201ENST00000379215 FANCEQ9HB96 536 aa23.28■■□□□ 1.32
ECHDC3-201ENST00000379215 IRAK4Q9NWZ3 460 aa23.28■■□□□ 1.32
ECHDC3-201ENST00000379215 TEX10Q9NXF1 929 aaPredicted RBP23.28■■□□□ 1.32
ECHDC3-201ENST00000379215 PDP2Q9P2J9 529 aa23.28■■□□□ 1.32
ECHDC3-201ENST00000379215 NIPSNAP3AQ9UFN0 247 aaPredicted RBP23.28■■□□□ 1.32
ECHDC3-201ENST00000379215 BCAP29Q9UHQ4 241 aa23.28■■□□□ 1.32
ECHDC3-201ENST00000379215 BTBD3Q9Y2F9 522 aa23.28■■□□□ 1.32
ECHDC3-201ENST00000379215 PCDHA9Q9Y5H5 950 aa23.28■■□□□ 1.32
ECHDC3-201ENST00000379215 ARID1BQ8NFD5 2236 aaPredicted RBP23.28■■□□□ 1.32
ECHDC3-201ENST00000379215 LDOC1O95751 146 aaPredicted RBP23.27■■□□□ 1.32
ECHDC3-201ENST00000379215 GP1BAP07359 652 aa23.27■■□□□ 1.32
ECHDC3-201ENST00000379215 CKMT2P17540 419 aa23.27■■□□□ 1.32
ECHDC3-201ENST00000379215 NELFEP18615 380 aaKnown RBP23.27■■□□□ 1.32
ECHDC3-201ENST00000379215 TLX1P31314 330 aaPredicted RBP23.27■■□□□ 1.32
ECHDC3-201ENST00000379215 CCL7P80098 99 aa23.27■■□□□ 1.32
ECHDC3-201ENST00000379215 GRM7Q14831 915 aa23.27■■□□□ 1.32
ECHDC3-201ENST00000379215 NANOGP8Q6NSW7 305 aa23.27■■□□□ 1.32
ECHDC3-201ENST00000379215 ANKRD46Q86W74 232 aa23.27■■□□□ 1.32
ECHDC3-201ENST00000379215 KIAA2013Q8IYS2 634 aa23.27■■□□□ 1.32
ECHDC3-201ENST00000379215 EFCAB3Q8N7B9 438 aa23.27■■□□□ 1.32
ECHDC3-201ENST00000379215 SUMF1Q8NBK3 374 aa23.27■■□□□ 1.32
ECHDC3-201ENST00000379215 DNAJB14Q8TBM8 379 aa23.27■■□□□ 1.32
ECHDC3-201ENST00000379215 CNDP2Q96KP4 475 aaKnown RBP23.27■■□□□ 1.32
ECHDC3-201ENST00000379215 ANKRD27Q96NW4 1050 aa23.27■■□□□ 1.32
ECHDC3-201ENST00000379215 PAIP1Q9H074 479 aaKnown RBP23.27■■□□□ 1.32
ECHDC3-201ENST00000379215 NANOGQ9H9S0 305 aa23.27■■□□□ 1.32
ECHDC3-201ENST00000379215 CLK4Q9HAZ1 481 aaKnown RBP23.27■■□□□ 1.32
ECHDC3-201ENST00000379215 SLAMF8Q9P0V8 285 aa23.27■■□□□ 1.32
ECHDC3-201ENST00000379215 SUCOQ9UBS9 1254 aaKnown RBP23.27■■□□□ 1.32
ECHDC3-201ENST00000379215 FITM1A5D6W6 292 aa23.26■■□□□ 1.31
ECHDC3-201ENST00000379215 GALR3O60755 368 aaPredicted RBP23.26■■□□□ 1.31
ECHDC3-201ENST00000379215 PDE5AO76074 875 aa23.26■■□□□ 1.31
ECHDC3-201ENST00000379215 EEFSECP57772 596 aaKnown RBP23.26■■□□□ 1.31
ECHDC3-201ENST00000379215 FAM53BQ14153 422 aa23.26■■□□□ 1.31
ECHDC3-201ENST00000379215 SNAP47Q5SQN1 464 aa23.26■■□□□ 1.31
ECHDC3-201ENST00000379215 C1orf146Q5VVC0 180 aa23.26■■□□□ 1.31
ECHDC3-201ENST00000379215 SLC15A3Q8IY34 581 aa23.26■■□□□ 1.31
ECHDC3-201ENST00000379215 TRIML2Q8N7C3 387 aa23.26■■□□□ 1.31
ECHDC3-201ENST00000379215 TMEM125Q96AQ2 219 aa23.26■■□□□ 1.31
ECHDC3-201ENST00000379215 TMEM9Q9P0T7 183 aa23.26■■□□□ 1.31
ECHDC3-201ENST00000379215 ZNF282Q9UDV7 671 aaPredicted RBP23.26■■□□□ 1.31
ECHDC3-201ENST00000379215 FBXW2Q9UKT8 454 aa23.26■■□□□ 1.31
ECHDC3-201ENST00000379215 PSME2Q9UL46 239 aa23.26■■□□□ 1.31
ECHDC3-201ENST00000379215 A0A0C4DFX4 3053 aa23.26■■□□□ 1.31
ECHDC3-201ENST00000379215 ZNF318Q5VUA4 2279 aa23.26■■□□□ 1.31
ECHDC3-201ENST00000379215 TRBV5-3A0A0A0MS03 114 aa23.26■■□□□ 1.31
ECHDC3-201ENST00000379215 PDPK1O15530 556 aa23.26■■□□□ 1.31
ECHDC3-201ENST00000379215 PROM1O43490 865 aa23.26■■□□□ 1.31
ECHDC3-201ENST00000379215 HCRTR1O43613 425 aa23.26■■□□□ 1.31
ECHDC3-201ENST00000379215 LRP3O75074 770 aa23.26■■□□□ 1.31
ECHDC3-201ENST00000379215 ZCCHC18P0CG32 403 aa23.26■■□□□ 1.31
ECHDC3-201ENST00000379215 NR2F6P10588 404 aa23.26■■□□□ 1.31
ECHDC3-201ENST00000379215 SEPHS1P49903 392 aa23.26■■□□□ 1.31
ECHDC3-201ENST00000379215 ZNF385BQ569K4 471 aa23.26■■□□□ 1.31
ECHDC3-201ENST00000379215 HPS6Q86YV9 775 aa23.26■■□□□ 1.31
ECHDC3-201ENST00000379215 ARHGEF39Q8N4T4 335 aa23.26■■□□□ 1.31
ECHDC3-201ENST00000379215 GOT1L1Q8NHS2 421 aaPredicted RBP23.26■■□□□ 1.31
ECHDC3-201ENST00000379215 VAPAQ9P0L0 249 aa23.26■■□□□ 1.31
ECHDC3-201ENST00000379215 FTSJ1Q9UET6 329 aa23.26■■□□□ 1.31
ECHDC3-201ENST00000379215 DAPP1Q9UN19 280 aa23.26■■□□□ 1.31
ECHDC3-201ENST00000379215 ATG4BQ9Y4P1 393 aa23.26■■□□□ 1.31
ECHDC3-201ENST00000379215 A0A1W2PQM1 296 aa23.25■■□□□ 1.31
ECHDC3-201ENST00000379215 A0A1W2PR48 441 aa23.25■■□□□ 1.31
ECHDC3-201ENST00000379215 NVLO15381 856 aaKnown RBP23.25■■□□□ 1.31
ECHDC3-201ENST00000379215 AIFM1O95831 613 aa23.25■■□□□ 1.31
ECHDC3-201ENST00000379215 HSD17B1P14061 328 aa23.25■■□□□ 1.31
ECHDC3-201ENST00000379215 PPIBP23284 216 aaKnown RBP23.25■■□□□ 1.31
ECHDC3-201ENST00000379215 PLIN5Q00G26 463 aa23.25■■□□□ 1.31
ECHDC3-201ENST00000379215 TNFRSF17Q02223 184 aa23.25■■□□□ 1.31
ECHDC3-201ENST00000379215 CEACAM7Q14002 265 aa23.25■■□□□ 1.31
ECHDC3-201ENST00000379215 MUM1Q2TAK8 710 aa23.25■■□□□ 1.31
ECHDC3-201ENST00000379215 DNAJC14Q6Y2X3 702 aaPredicted RBP23.25■■□□□ 1.31
ECHDC3-201ENST00000379215 SAMD14Q8IZD0 417 aaPredicted RBP23.25■■□□□ 1.31
ECHDC3-201ENST00000379215 CCDC124Q96CT7 223 aaKnown RBP23.25■■□□□ 1.31
ECHDC3-201ENST00000379215 ZBED6CLQ96FA7 236 aaPredicted RBP23.25■■□□□ 1.31
ECHDC3-201ENST00000379215 PHF12Q96QT6 1004 aa23.25■■□□□ 1.31
ECHDC3-201ENST00000379215 NEUROD4Q9HD90 331 aa23.25■■□□□ 1.31
ECHDC3-201ENST00000379215 ACSS1Q9NUB1 689 aaPredicted RBP23.25■■□□□ 1.31
ECHDC3-201ENST00000379215 GIMAP4Q9NUV9 329 aa23.25■■□□□ 1.31
ECHDC3-201ENST00000379215 CD300AQ9UGN4 299 aa23.25■■□□□ 1.31
ECHDC3-201ENST00000379215 VPS4AQ9UN37 437 aa23.25■■□□□ 1.31
ECHDC3-201ENST00000379215 NAALAD2Q9Y3Q0 740 aa23.25■■□□□ 1.31
ECHDC3-201ENST00000379215 PCDHB14Q9Y5E9 798 aa23.25■■□□□ 1.31
ECHDC3-201ENST00000379215 GOLGA4Q13439 2230 aaKnown RBP23.24■■□□□ 1.31
ECHDC3-201ENST00000379215 A0A1W2PRB8 838 aa23.24■■□□□ 1.31
ECHDC3-201ENST00000379215 HYKKA2RU49 373 aa23.24■■□□□ 1.31
ECHDC3-201ENST00000379215 NME4O00746 187 aa23.24■■□□□ 1.31
ECHDC3-201ENST00000379215 STAMBPO95630 424 aa23.24■■□□□ 1.31
ECHDC3-201ENST00000379215 CPN2P22792 545 aa23.24■■□□□ 1.31
ECHDC3-201ENST00000379215 ACP1P24666 158 aa23.24■■□□□ 1.31
ECHDC3-201ENST00000379215 LIM2P55344 173 aa23.24■■□□□ 1.31
ECHDC3-201ENST00000379215 FAM214AQ32MH5 1076 aa23.24■■□□□ 1.31
ECHDC3-201ENST00000379215 RUNDC3AQ59EK9 446 aa23.24■■□□□ 1.31
ECHDC3-201ENST00000379215 YOD1Q5VVQ6 348 aaPredicted RBP23.24■■□□□ 1.31
ECHDC3-201ENST00000379215 OR4A15Q8NGL6 344 aa23.24■■□□□ 1.31
ECHDC3-201ENST00000379215 ZFP28Q8NHY6 868 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 263.9 ms