RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 YDJCA8MPS7 323 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 CHP2O43745 196 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 BNIP3LO60238 219 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 C6P13671 934 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 ANXA11P50995 505 aaKnown RBP11.34□□□□□ -0.59
NPHP4-202ENST00000378161 SLC10A2Q12908 348 aaPredicted RBP11.34□□□□□ -0.59
NPHP4-202ENST00000378161 NKAPLQ5M9Q1 402 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 LIPNQ5VXI9 398 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 PTRHD1Q6GMV3 140 aaKnown RBP11.34□□□□□ -0.59
NPHP4-202ENST00000378161 WASH2PQ6VEQ5 465 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 ZDHHC21Q8IVQ6 265 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 LAX1Q8IWV1 398 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 KIAA0319LQ8IZA0 1049 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 PXT1Q8NFP0 134 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 TERB2Q8NHR7 220 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 COL26A1Q96A83 441 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 CACNG6Q9BXT2 260 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 SAP130Q9H0E3 1048 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 OPN3Q9H1Y3 402 aaPredicted RBP11.34□□□□□ -0.59
NPHP4-202ENST00000378161 OR10H1Q9Y4A9 318 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 DMRT1Q9Y5R6 373 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 STK25O00506 426 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 PGRMC2O15173 223 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 RECQL4O94761 1208 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 HMBSP08397 361 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 CFHP08603 1231 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 AP3S2P59780 193 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 ST3GAL4Q11206 333 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 AAK1Q2M2I8 961 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 HSDL2Q6YN16 418 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 GALNT10Q86SR1 603 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 PIH1D2Q8WWB5 315 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 CRYGNQ8WXF5 182 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 CCDC74BQ96LY2 380 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 OR2M4Q96R27 311 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 SUCNR1Q9BXA5 334 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 OR12D3Q9UGF7 316 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 FBXL21Q9UKT6 434 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 GPR25O00155 361 aa11.33□□□□□ -0.6
NPHP4-202ENST00000378161 PCDH17O14917 1159 aa11.33□□□□□ -0.6
NPHP4-202ENST00000378161 THP07101 528 aa11.33□□□□□ -0.6
NPHP4-202ENST00000378161 CTSHP09668 335 aa11.33□□□□□ -0.6
NPHP4-202ENST00000378161 SPP1P10451 314 aa11.33□□□□□ -0.6
NPHP4-202ENST00000378161 ZNF25P17030 456 aaPredicted RBP11.33□□□□□ -0.6
NPHP4-202ENST00000378161 P2RY4P51582 365 aa11.33□□□□□ -0.6
NPHP4-202ENST00000378161 RSU1Q15404 277 aa11.33□□□□□ -0.6
NPHP4-202ENST00000378161 CERCAMQ5T4B2 595 aa11.33□□□□□ -0.6
NPHP4-202ENST00000378161 SLC39A4Q6P5W5 647 aa11.33□□□□□ -0.6
NPHP4-202ENST00000378161 GPRIN3Q6ZVF9 776 aa11.33□□□□□ -0.6
NPHP4-202ENST00000378161 B3GNT8Q7Z7M8 397 aa11.33□□□□□ -0.6
NPHP4-202ENST00000378161 CCDC190Q86UF4 302 aa11.33□□□□□ -0.6
NPHP4-202ENST00000378161 LIX1LQ8IVB5 337 aa11.33□□□□□ -0.6
NPHP4-202ENST00000378161 SPPL2AQ8TCT8 520 aa11.33□□□□□ -0.6
NPHP4-202ENST00000378161 PIGKQ92643 395 aa11.33□□□□□ -0.6
NPHP4-202ENST00000378161 MAP3K3Q99759 626 aa11.33□□□□□ -0.6
NPHP4-202ENST00000378161 SYT11Q9BT88 431 aa11.33□□□□□ -0.6
NPHP4-202ENST00000378161 FTHL17Q9BXU8 183 aa11.33□□□□□ -0.6
NPHP4-202ENST00000378161 CASS4Q9NQ75 786 aa11.33□□□□□ -0.6
NPHP4-202ENST00000378161 ZNF69Q9UC07 566 aa11.33□□□□□ -0.6
NPHP4-202ENST00000378161 HIST1H2AGP0C0S8 130 aaPredicted RBP11.33□□□□□ -0.6
NPHP4-202ENST00000378161 ZNF286BP0CG31 522 aa11.33□□□□□ -0.6
NPHP4-202ENST00000378161 HIST1H2ADP20671 130 aa11.33□□□□□ -0.6
NPHP4-202ENST00000378161 ZNF33AQ06730 810 aa11.33□□□□□ -0.6
NPHP4-202ENST00000378161 OR7E24Q6IFN5 339 aa11.33□□□□□ -0.6
NPHP4-202ENST00000378161 MSANTD1Q6ZTZ1 278 aa11.33□□□□□ -0.6
NPHP4-202ENST00000378161 USP53Q70EK8 1073 aa11.33□□□□□ -0.6
NPHP4-202ENST00000378161 SLC46A3Q7Z3Q1 461 aa11.33□□□□□ -0.6
NPHP4-202ENST00000378161 SLC41A1Q8IVJ1 513 aa11.33□□□□□ -0.6
NPHP4-202ENST00000378161 SKA3Q8IX90 412 aa11.33□□□□□ -0.6
NPHP4-202ENST00000378161 LPPQ93052 612 aa11.33□□□□□ -0.6
NPHP4-202ENST00000378161 HIST1H2AHQ96KK5 128 aa11.33□□□□□ -0.6
NPHP4-202ENST00000378161 HIST1H2AJQ99878 128 aa11.33□□□□□ -0.6
NPHP4-202ENST00000378161 H2AFJQ9BTM1 129 aa11.33□□□□□ -0.6
NPHP4-202ENST00000378161 ZNF471Q9BX82 626 aaPredicted RBP11.33□□□□□ -0.6
NPHP4-202ENST00000378161 TKTL2Q9H0I9 626 aa11.33□□□□□ -0.6
NPHP4-202ENST00000378161 ALX4Q9H161 411 aaPredicted RBP11.33□□□□□ -0.6
NPHP4-202ENST00000378161 SMCO4Q9NRQ5 59 aa11.33□□□□□ -0.6
NPHP4-202ENST00000378161 AP1M2Q9Y6Q5 423 aa11.33□□□□□ -0.6
NPHP4-202ENST00000378161 SLC22A23A1A5C7 686 aa11.33□□□□□ -0.6
NPHP4-202ENST00000378161 GNRH1P01148 92 aa11.33□□□□□ -0.6
NPHP4-202ENST00000378161 EPOP01588 193 aa11.33□□□□□ -0.6
NPHP4-202ENST00000378161 LGALS2P05162 132 aa11.33□□□□□ -0.6
NPHP4-202ENST00000378161 ADH1AP07327 375 aa11.33□□□□□ -0.6
NPHP4-202ENST00000378161 ASPAP45381 313 aa11.33□□□□□ -0.6
NPHP4-202ENST00000378161 HSPA7P48741 367 aa11.33□□□□□ -0.6
NPHP4-202ENST00000378161 BTG1P62324 171 aa11.33□□□□□ -0.6
NPHP4-202ENST00000378161 CCINQ13939 588 aa11.33□□□□□ -0.6
NPHP4-202ENST00000378161 ZRANB3Q5FWF4 1079 aa11.33□□□□□ -0.6
NPHP4-202ENST00000378161 ETV3LQ6ZN32 361 aa11.33□□□□□ -0.6
NPHP4-202ENST00000378161 FBXO39Q8N4B4 442 aa11.33□□□□□ -0.6
NPHP4-202ENST00000378161 PCDH19Q8TAB3 1148 aa11.33□□□□□ -0.6
NPHP4-202ENST00000378161 ATXN3LQ9H3M9 355 aa11.33□□□□□ -0.6
NPHP4-202ENST00000378161 CDV3Q9UKY7 258 aaKnown RBP11.33□□□□□ -0.6
NPHP4-202ENST00000378161 GOLT1BQ9Y3E0 138 aa11.33□□□□□ -0.6
NPHP4-202ENST00000378161 CICQ96RK0 1608 aaPredicted RBP11.33□□□□□ -0.6
NPHP4-202ENST00000378161 PHRF1Q9P1Y6 1649 aaKnown RBP11.33□□□□□ -0.6
NPHP4-202ENST00000378161 TMEM82A0PJX8 343 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 TMEM72A0PK05 275 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 SMIM30A4D0T7 59 aa11.32□□□□□ -0.6
NPHP4-202ENST00000378161 TRAPPC13A5PLN9 417 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms