RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 A0A0G2JN53 185 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 A0A1W2PRU2 124 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 BOLA2-SMG1P6H3BVE0 249 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 I3L521 148 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 TSPAN4O14817 238 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 MMP20O60882 483 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 TRIM3O75382 744 aaPredicted RBP8.07□□□□□ -1.12
VPS36-201ENST00000378060 RASGRP1O95267 797 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 PDYNP01213 254 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 C1GALT1C1LP0DN25 315 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 IL4RP24394 825 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 PTGS2P35354 604 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 HNRNPA0Q13151 305 aaKnown RBP8.07□□□□□ -1.12
VPS36-201ENST00000378060 PPIGQ13427 754 aaKnown RBP eCLIP8.07□□□□□ -1.124e-8■■■■■ 27.2
VPS36-201ENST00000378060 TOMM20Q15388 145 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 PROX2Q3B8N5 592 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 FBXO46Q6PJ61 603 aaPredicted RBP8.07□□□□□ -1.12
VPS36-201ENST00000378060 ZNF598Q86UK7 904 aaKnown RBP8.07□□□□□ -1.12
VPS36-201ENST00000378060 SPAG16Q8N0X2 631 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 TMEM125Q96AQ2 219 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 FUZQ9BT04 418 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 TMED9Q9BVK6 235 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 CHIAQ9BZP6 476 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 IFT46Q9NQC8 304 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 CDH7Q9ULB5 785 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 A0A1W2PQ45 241 aaPredicted RBP8.07□□□□□ -1.12
VPS36-201ENST00000378060 A0A1W2PQY0 241 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 FUOMA2VDF0 154 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 ELOA3DA6NLF2 546 aaPredicted RBP8.07□□□□□ -1.12
VPS36-201ENST00000378060 TLX3O43711 291 aaPredicted RBP8.07□□□□□ -1.12
VPS36-201ENST00000378060 PRKYO43930 277 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 ATF4P18848 351 aaPredicted RBP8.07□□□□□ -1.12
VPS36-201ENST00000378060 ATP5A1P25705 553 aaKnown RBP8.07□□□□□ -1.12
VPS36-201ENST00000378060 MAPK3P27361 379 aaPredicted RBP8.07□□□□□ -1.12
VPS36-201ENST00000378060 BDKRB1P46663 353 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 MAP2K3P46734 347 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 GPR68Q15743 365 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 ELOA3BQ3SY89 546 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 COL13A1Q5TAT6 717 aaPredicted RBP8.07□□□□□ -1.12
VPS36-201ENST00000378060 ADGRG5Q8IZF4 528 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 CMTM8Q8IZV2 173 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 KRTCAP2Q8N6L1 136 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 KLHDC9Q8NEP7 349 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 ELOA3Q8NG57 546 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 OR52B6Q8NGF0 335 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 POF1BQ8WVV4 589 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 RIT1Q92963 219 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 IGSF8Q969P0 613 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 YIPF4Q9BSR8 244 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 RNF38Q9H0F5 515 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 ELAC1Q9H777 363 aaKnown RBP8.07□□□□□ -1.12
VPS36-201ENST00000378060 SMURF1Q9HCE7 757 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 BRD7Q9NPI1 651 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 EMCNQ9ULC0 261 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 MEMO1Q9Y316 297 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 PRKAB1Q9Y478 270 aa8.07□□□□□ -1.12
VPS36-201ENST00000378060 H3BMQ9 156 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 L7N2F9 121 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 ARNTLO00327 626 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 RLN2P04090 185 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 HOXA11P31270 313 aaPredicted RBP8.06□□□□□ -1.12
VPS36-201ENST00000378060 GMPRP36959 345 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 GNALP38405 381 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 DCTP40126 519 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 CLCN7P51798 805 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 CLCNKAP51800 687 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 LRP8Q14114 963 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 NUP54Q7Z3B4 507 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 FAM124AQ86V42 546 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 CARM1Q86X55 608 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 FAM129CQ86XR2 697 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 SLC15A4Q8N697 577 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 PIGKQ92643 395 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 DPF3Q92784 378 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 LRIG1Q96JA1 1093 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 COG8Q96MW5 612 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 KXD1Q9BQD3 176 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 TRMT61BQ9BVS5 477 aaKnown RBP8.06□□□□□ -1.12
VPS36-201ENST00000378060 GTPBP2Q9BX10 602 aaKnown RBP8.06□□□□□ -1.12
VPS36-201ENST00000378060 AGPAT4Q9NRZ5 378 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 RIMS3Q9UJD0 308 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 LIPT1Q9Y234 373 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 IFT52Q9Y366 437 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 PTGDR2Q9Y5Y4 395 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 AP1M2Q9Y6Q5 423 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 TRBV23OR9-2A0A075B6M9 112 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 KIAA0513O60268 411 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 COQ9O75208 318 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 GATBO75879 557 aaKnown RBP8.06□□□□□ -1.12
VPS36-201ENST00000378060 KRT33AO76009 404 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 LATS1O95835 1130 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 CELP19835 753 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 MATN1P21941 496 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 GPX3P22352 226 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 ACRV1P26436 265 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 MAP3K8P41279 467 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 WASP42768 502 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 SLC11A1P49279 550 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 PIGFQ07326 219 aa8.06□□□□□ -1.12
VPS36-201ENST00000378060 SLC13A2Q13183 592 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms