RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 PRDM7Q9NQW5 492 aa15.76■□□□□ 0.11
HMGN4-201ENST00000377575 TSC22D4Q9Y3Q8 395 aa15.76■□□□□ 0.11
HMGN4-201ENST00000377575 HIVEP3Q5T1R4 2406 aa15.76■□□□□ 0.11
HMGN4-201ENST00000377575 BLACEA4D250 179 aa15.75■□□□□ 0.11
HMGN4-201ENST00000377575 STX16-NPEPL1H3BU86 382 aa15.75■□□□□ 0.11
HMGN4-201ENST00000377575 E2F3O00716 465 aa15.75■□□□□ 0.11
HMGN4-201ENST00000377575 CDK2AP1O14519 115 aa15.75■□□□□ 0.11
HMGN4-201ENST00000377575 STX16O14662 325 aa15.75■□□□□ 0.11
HMGN4-201ENST00000377575 RIPK2O43353 540 aa15.75■□□□□ 0.11
HMGN4-201ENST00000377575 PRAMEF2O60811 474 aa15.75■□□□□ 0.11
HMGN4-201ENST00000377575 SCELO95171 688 aa15.75■□□□□ 0.11
HMGN4-201ENST00000377575 EDN3P14138 238 aa15.75■□□□□ 0.11
HMGN4-201ENST00000377575 EEF1DP29692 281 aaKnown RBP15.75■□□□□ 0.11
HMGN4-201ENST00000377575 ARL1P40616 181 aaPredicted RBP15.75■□□□□ 0.11
HMGN4-201ENST00000377575 SSR2P43308 183 aa15.75■□□□□ 0.11
HMGN4-201ENST00000377575 RAP1GDS1P52306 607 aa15.75■□□□□ 0.11
HMGN4-201ENST00000377575 AP5B1Q2VPB7 878 aa15.75■□□□□ 0.11
HMGN4-201ENST00000377575 KHDRBS2Q5VWX1 349 aaKnown RBP15.75■□□□□ 0.11
HMGN4-201ENST00000377575 HUS1BQ8NHY5 278 aa15.75■□□□□ 0.11
HMGN4-201ENST00000377575 PRR7Q8TB68 274 aa15.75■□□□□ 0.11
HMGN4-201ENST00000377575 MRPL57Q9BQC6 102 aaKnown RBP15.75■□□□□ 0.11
HMGN4-201ENST00000377575 UTP23Q9BRU9 249 aaKnown RBP15.75■□□□□ 0.11
HMGN4-201ENST00000377575 IPPKQ9H8X2 491 aa15.75■□□□□ 0.11
HMGN4-201ENST00000377575 DMRT3Q9NQL9 472 aa15.75■□□□□ 0.11
HMGN4-201ENST00000377575 OLAHQ9NV23 265 aa15.75■□□□□ 0.11
HMGN4-201ENST00000377575 ZNF358Q9NW07 568 aa15.75■□□□□ 0.11
HMGN4-201ENST00000377575 SVILO95425 2214 aa15.75■□□□□ 0.11
HMGN4-201ENST00000377575 LRRC14BA6NHZ5 514 aa15.74■□□□□ 0.11
HMGN4-201ENST00000377575 A8MUA0 341 aa15.74■□□□□ 0.11
HMGN4-201ENST00000377575 H0YIV9 168 aa15.74■□□□□ 0.11
HMGN4-201ENST00000377575 CYR61O00622 381 aa15.74■□□□□ 0.11
HMGN4-201ENST00000377575 MYO1DO94832 1006 aa15.74■□□□□ 0.11
HMGN4-201ENST00000377575 SIX3O95343 332 aaPredicted RBP15.74■□□□□ 0.11
HMGN4-201ENST00000377575 TGFB1P01137 390 aa15.74■□□□□ 0.11
HMGN4-201ENST00000377575 HIST1H1TP22492 207 aaPredicted RBP15.74■□□□□ 0.11
HMGN4-201ENST00000377575 ATP5A1P25705 553 aaKnown RBP15.74■□□□□ 0.11
HMGN4-201ENST00000377575 CCNG1P51959 295 aa15.74■□□□□ 0.11
HMGN4-201ENST00000377575 TUBA3CQ13748 450 aa15.74■□□□□ 0.11
HMGN4-201ENST00000377575 EIF2S3LQ2VIR3 472 aaKnown RBP15.74■□□□□ 0.11
HMGN4-201ENST00000377575 TUBA3EQ6PEY2 450 aa15.74■□□□□ 0.11
HMGN4-201ENST00000377575 ZNF793Q6ZN11 406 aa15.74■□□□□ 0.11
HMGN4-201ENST00000377575 KIF2BQ8N4N8 673 aa15.74■□□□□ 0.11
HMGN4-201ENST00000377575 HORMAD2Q8N7B1 307 aa15.74■□□□□ 0.11
HMGN4-201ENST00000377575 ACOT4Q8N9L9 421 aa15.74■□□□□ 0.11
HMGN4-201ENST00000377575 B3GNT7Q8NFL0 401 aa15.74■□□□□ 0.11
HMGN4-201ENST00000377575 ATP6V1E2Q96A05 226 aa15.74■□□□□ 0.11
HMGN4-201ENST00000377575 PHF21BQ96EK2 531 aa15.74■□□□□ 0.11
HMGN4-201ENST00000377575 CSF3RQ99062 836 aa15.74■□□□□ 0.11
HMGN4-201ENST00000377575 MRPL46Q9H2W6 279 aaKnown RBP15.74■□□□□ 0.11
HMGN4-201ENST00000377575 ADAP2Q9NPF8 381 aa15.74■□□□□ 0.11
HMGN4-201ENST00000377575 PNO1Q9NRX1 252 aaKnown RBP15.74■□□□□ 0.11
HMGN4-201ENST00000377575 IQANK1A0A1B0GTG1 560 aa15.73■□□□□ 0.11
HMGN4-201ENST00000377575 GABRR3A8MPY1 467 aa15.73■□□□□ 0.11
HMGN4-201ENST00000377575 RTCAO00442 366 aaKnown RBP15.73■□□□□ 0.11
HMGN4-201ENST00000377575 FCHO1O14526 889 aa15.73■□□□□ 0.11
HMGN4-201ENST00000377575 SH3BGRLO75368 114 aa15.73■□□□□ 0.11
HMGN4-201ENST00000377575 RASAL1O95294 804 aa15.73■□□□□ 0.11
HMGN4-201ENST00000377575 CRYABP02511 175 aaKnown RBP15.73■□□□□ 0.11
HMGN4-201ENST00000377575 CLCN2P51788 898 aa15.73■□□□□ 0.11
HMGN4-201ENST00000377575 HNRNPFP52597 415 aaKnown RBP15.73■□□□□ 0.11
HMGN4-201ENST00000377575 ARFIP1P53367 373 aa15.73■□□□□ 0.11
HMGN4-201ENST00000377575 CPSF6Q16630 551 aaKnown RBP eCLIP15.73■□□□□ 0.11
HMGN4-201ENST00000377575 ZNF766Q5HY98 468 aa15.73■□□□□ 0.11
HMGN4-201ENST00000377575 DEPDC1Q5TB30 811 aa15.73■□□□□ 0.11
HMGN4-201ENST00000377575 ADGRD1Q6QNK2 874 aa15.73■□□□□ 0.11
HMGN4-201ENST00000377575 UBE3DQ7Z6J8 389 aa15.73■□□□□ 0.11
HMGN4-201ENST00000377575 CLNKQ7Z7G1 428 aa15.73■□□□□ 0.11
HMGN4-201ENST00000377575 RPS19BP1Q86WX3 136 aaKnown RBP15.73■□□□□ 0.11
HMGN4-201ENST00000377575 L3MBTL4Q8NA19 623 aa15.73■□□□□ 0.11
HMGN4-201ENST00000377575 TMEM52Q8NDY8 209 aa15.73■□□□□ 0.11
HMGN4-201ENST00000377575 C7orf57Q8NEG2 295 aa15.73■□□□□ 0.11
HMGN4-201ENST00000377575 NFAM1Q8NET5 270 aaPredicted RBP15.73■□□□□ 0.11
HMGN4-201ENST00000377575 RGMAQ96B86 450 aa15.73■□□□□ 0.11
HMGN4-201ENST00000377575 VMP1Q96GC9 406 aa15.73■□□□□ 0.11
HMGN4-201ENST00000377575 MTERF1Q99551 399 aaKnown RBP15.73■□□□□ 0.11
HMGN4-201ENST00000377575 NPAS2Q99743 824 aa15.73■□□□□ 0.11
HMGN4-201ENST00000377575 SLX1AQ9BQ83 275 aa15.73■□□□□ 0.11
HMGN4-201ENST00000377575 DEFB126Q9BYW3 111 aa15.73■□□□□ 0.11
HMGN4-201ENST00000377575 OR51B5Q9H339 312 aa15.73■□□□□ 0.11
HMGN4-201ENST00000377575 CDCP1Q9H5V8 836 aa15.73■□□□□ 0.11
HMGN4-201ENST00000377575 FETUBQ9UGM5 382 aa15.73■□□□□ 0.11
HMGN4-201ENST00000377575 PCDHGB6Q9Y5F9 930 aa15.73■□□□□ 0.11
HMGN4-201ENST00000377575 ZGRF1Q86YA3 2104 aa15.73■□□□□ 0.11
HMGN4-201ENST00000377575 TRBV11-1A0A0K0K1C0 115 aa15.72■□□□□ 0.11
HMGN4-201ENST00000377575 SAP18O00422 153 aaKnown RBP15.72■□□□□ 0.11
HMGN4-201ENST00000377575 CTNSO60931 367 aa15.72■□□□□ 0.11
HMGN4-201ENST00000377575 CLDN9O95484 217 aa15.72■□□□□ 0.11
HMGN4-201ENST00000377575 CD46P15529 392 aa15.72■□□□□ 0.11
HMGN4-201ENST00000377575 PTX3P26022 381 aaPredicted RBP15.72■□□□□ 0.11
HMGN4-201ENST00000377575 OC90Q02509 493 aaPredicted RBP15.72■□□□□ 0.11
HMGN4-201ENST00000377575 STX4Q12846 297 aa15.72■□□□□ 0.11
HMGN4-201ENST00000377575 SERTAD2Q14140 314 aa15.72■□□□□ 0.11
HMGN4-201ENST00000377575 OR1C1Q15619 314 aa15.72■□□□□ 0.11
HMGN4-201ENST00000377575 ELAVL1Q15717 326 aaKnown RBP15.72■□□□□ 0.11
HMGN4-201ENST00000377575 C10orf62Q5T681 223 aaPredicted RBP15.72■□□□□ 0.11
HMGN4-201ENST00000377575 OR4C11Q6IEV9 310 aa15.72■□□□□ 0.11
HMGN4-201ENST00000377575 TIFABQ6ZNK6 161 aa15.72■□□□□ 0.11
HMGN4-201ENST00000377575 LCA5Q86VQ0 697 aa15.72■□□□□ 0.11
HMGN4-201ENST00000377575 TMEM132CQ8N3T6 1108 aa15.72■□□□□ 0.11
HMGN4-201ENST00000377575 EIF1ADQ8N9N8 165 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms