RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 ARAFP10398 606 aa12.63□□□□□ -0.39
ACTN1-202ENST00000376839 NPPBP16860 134 aa12.63□□□□□ -0.39
ACTN1-202ENST00000376839 SOX6P35712 828 aa12.63□□□□□ -0.39
ACTN1-202ENST00000376839 SOX3P41225 446 aa12.63□□□□□ -0.39
ACTN1-202ENST00000376839 HMGA2P52926 109 aa12.63□□□□□ -0.39
ACTN1-202ENST00000376839 CRISP1P54107 249 aa12.63□□□□□ -0.39
ACTN1-202ENST00000376839 DCDC1P59894 354 aa12.63□□□□□ -0.39
ACTN1-202ENST00000376839 E2F2Q14209 437 aa12.63□□□□□ -0.39
ACTN1-202ENST00000376839 RPS26P11Q5JNZ5 115 aaPredicted RBP12.63□□□□□ -0.39
ACTN1-202ENST00000376839 C1QTNF12Q5T7M4 302 aa12.63□□□□□ -0.39
ACTN1-202ENST00000376839 PLAG1Q6DJT9 500 aa12.63□□□□□ -0.39
ACTN1-202ENST00000376839 FRMPD2BQ6IN97 320 aa12.63□□□□□ -0.39
ACTN1-202ENST00000376839 TRIM40Q6P9F5 258 aa12.63□□□□□ -0.39
ACTN1-202ENST00000376839 WDR53Q7Z5U6 358 aaPredicted RBP12.63□□□□□ -0.39
ACTN1-202ENST00000376839 C9orf43Q8TAL5 461 aaPredicted RBP12.63□□□□□ -0.39
ACTN1-202ENST00000376839 CAPSLQ8WWF8 208 aa12.63□□□□□ -0.39
ACTN1-202ENST00000376839 TAPBPLQ9BX59 468 aa12.63□□□□□ -0.39
ACTN1-202ENST00000376839 SORBS1Q9BX66 1292 aaKnown RBP12.63□□□□□ -0.39
ACTN1-202ENST00000376839 RSPO3Q9BXY4 272 aaPredicted RBP12.63□□□□□ -0.39
ACTN1-202ENST00000376839 SLC46A2Q9BY10 475 aa12.63□□□□□ -0.39
ACTN1-202ENST00000376839 TAS2R9Q9NYW1 312 aa12.63□□□□□ -0.39
ACTN1-202ENST00000376839 MKLN1Q9UL63 735 aa12.63□□□□□ -0.39
ACTN1-202ENST00000376839 COL4A6Q14031 1691 aa12.63□□□□□ -0.39
ACTN1-202ENST00000376839 H3BQ06 376 aaPredicted RBP12.63□□□□□ -0.39
ACTN1-202ENST00000376839 ATG13O75143 517 aa12.63□□□□□ -0.39
ACTN1-202ENST00000376839 ENTPD6O75354 484 aa12.63□□□□□ -0.39
ACTN1-202ENST00000376839 KLK1P06870 262 aa12.63□□□□□ -0.39
ACTN1-202ENST00000376839 CKMT1AP12532 417 aa12.63□□□□□ -0.39
ACTN1-202ENST00000376839 TCEA1P23193 301 aaKnown RBP12.63□□□□□ -0.39
ACTN1-202ENST00000376839 PRLHRP49683 370 aa12.63□□□□□ -0.39
ACTN1-202ENST00000376839 LIM2P55344 173 aa12.63□□□□□ -0.39
ACTN1-202ENST00000376839 RPS26P62854 115 aaKnown RBP12.63□□□□□ -0.39
ACTN1-202ENST00000376839 LRRC74AQ0VAA2 488 aa12.63□□□□□ -0.39
ACTN1-202ENST00000376839 ELOAQ14241 798 aaKnown RBP12.63□□□□□ -0.39
ACTN1-202ENST00000376839 PUM1Q14671 1186 aaKnown RBP eCLIP12.63□□□□□ -0.395e-6■■■□□ 17
ACTN1-202ENST00000376839 ZNF630Q2M218 657 aaPredicted RBP12.63□□□□□ -0.39
ACTN1-202ENST00000376839 ARSIQ5FYB1 569 aa12.63□□□□□ -0.39
ACTN1-202ENST00000376839 FAM71E1Q6IPT2 247 aa12.63□□□□□ -0.39
ACTN1-202ENST00000376839 ZNF770Q6IQ21 691 aaPredicted RBP12.63□□□□□ -0.39
ACTN1-202ENST00000376839 TMEM220Q6QAJ8 160 aa12.63□□□□□ -0.39
ACTN1-202ENST00000376839 ZNF740Q8NDX6 193 aa12.63□□□□□ -0.39
ACTN1-202ENST00000376839 VANGL1Q8TAA9 524 aaPredicted RBP12.63□□□□□ -0.39
ACTN1-202ENST00000376839 CD99L2Q8TCZ2 262 aa12.63□□□□□ -0.39
ACTN1-202ENST00000376839 RAET1EQ8TD07 263 aa12.63□□□□□ -0.39
ACTN1-202ENST00000376839 MAPKAP1Q9BPZ7 522 aa12.63□□□□□ -0.39
ACTN1-202ENST00000376839 RC3H2Q9HBD1 1191 aaKnown RBP12.63□□□□□ -0.39
ACTN1-202ENST00000376839 HHATLQ9HCP6 504 aa12.63□□□□□ -0.39
ACTN1-202ENST00000376839 CNOT2Q9NZN8 540 aaKnown RBP12.63□□□□□ -0.39
ACTN1-202ENST00000376839 CLEC2DQ9UHP7 191 aa12.63□□□□□ -0.39
ACTN1-202ENST00000376839 TBC1D24Q9ULP9 559 aa12.63□□□□□ -0.39
ACTN1-202ENST00000376839 CFL2Q9Y281 166 aa12.63□□□□□ -0.39
ACTN1-202ENST00000376839 DENND4CQ5VZ89 1909 aa12.62□□□□□ -0.39
ACTN1-202ENST00000376839 TRAV19A0A0A6YYK7 116 aa12.62□□□□□ -0.39
ACTN1-202ENST00000376839 PIPSLA2A3N6 862 aa12.62□□□□□ -0.39
ACTN1-202ENST00000376839 LOC110117498-PIK3R3F6TDL0 507 aa12.62□□□□□ -0.39
ACTN1-202ENST00000376839 SOX14O95416 240 aa12.62□□□□□ -0.39
ACTN1-202ENST00000376839 C1orf105O95561 183 aa12.62□□□□□ -0.39
ACTN1-202ENST00000376839 CYP2A6P11509 494 aaPredicted RBP12.62□□□□□ -0.39
ACTN1-202ENST00000376839 TIMP2P16035 220 aa12.62□□□□□ -0.39
ACTN1-202ENST00000376839 CA8P35219 290 aa12.62□□□□□ -0.39
ACTN1-202ENST00000376839 SLC15A1P46059 708 aa12.62□□□□□ -0.39
ACTN1-202ENST00000376839 TMEM115Q12893 351 aaPredicted RBP12.62□□□□□ -0.39
ACTN1-202ENST00000376839 TMEM215Q68D42 235 aa12.62□□□□□ -0.39
ACTN1-202ENST00000376839 BRAT1Q6PJG6 821 aa12.62□□□□□ -0.39
ACTN1-202ENST00000376839 TAGAPQ8N103 731 aa12.62□□□□□ -0.39
ACTN1-202ENST00000376839 CYB5D2Q8WUJ1 264 aa12.62□□□□□ -0.39
ACTN1-202ENST00000376839 GLYATL1Q969I3 302 aa12.62□□□□□ -0.39
ACTN1-202ENST00000376839 ZNF486Q96H40 463 aaPredicted RBP12.62□□□□□ -0.39
ACTN1-202ENST00000376839 FAM83CQ9BQN1 747 aa12.62□□□□□ -0.39
ACTN1-202ENST00000376839 CNPPD1Q9BV87 410 aa12.62□□□□□ -0.39
ACTN1-202ENST00000376839 BARHL1Q9BZE3 327 aa12.62□□□□□ -0.39
ACTN1-202ENST00000376839 EXOSC4Q9NPD3 245 aaKnown RBP12.62□□□□□ -0.39
ACTN1-202ENST00000376839 CLN6Q9NWW5 311 aa12.62□□□□□ -0.39
ACTN1-202ENST00000376839 ABT1Q9ULW3 272 aaKnown RBP12.62□□□□□ -0.39
ACTN1-202ENST00000376839 A0A1W2PRB8 838 aa12.62□□□□□ -0.39
ACTN1-202ENST00000376839 SH3D21A4FU49 640 aa12.62□□□□□ -0.39
ACTN1-202ENST00000376839 CYP7B1O75881 506 aa12.62□□□□□ -0.39
ACTN1-202ENST00000376839 SNX4O95219 450 aa12.62□□□□□ -0.39
ACTN1-202ENST00000376839 IL3P08700 152 aa12.62□□□□□ -0.39
ACTN1-202ENST00000376839 RHCEP18577 417 aa12.62□□□□□ -0.39
ACTN1-202ENST00000376839 TNFSF8P32971 234 aa12.62□□□□□ -0.39
ACTN1-202ENST00000376839 OPRD1P41143 372 aa12.62□□□□□ -0.39
ACTN1-202ENST00000376839 DEFA1P59665 94 aa12.62□□□□□ -0.39
ACTN1-202ENST00000376839 DEFA3P59666 94 aa12.62□□□□□ -0.39
ACTN1-202ENST00000376839 ZNF284Q2VY69 593 aa12.62□□□□□ -0.39
ACTN1-202ENST00000376839 LAS2Q8IYD9 372 aa12.62□□□□□ -0.39
ACTN1-202ENST00000376839 TRMT61AQ96FX7 289 aaKnown RBP12.62□□□□□ -0.39
ACTN1-202ENST00000376839 ZNF558Q96NG5 402 aa12.62□□□□□ -0.39
ACTN1-202ENST00000376839 SLC30A2Q9BRI3 323 aa12.62□□□□□ -0.39
ACTN1-202ENST00000376839 ZSCAN5AQ9BUG6 496 aa12.62□□□□□ -0.39
ACTN1-202ENST00000376839 NEK6Q9HC98 313 aa12.62□□□□□ -0.39
ACTN1-202ENST00000376839 DNAJC27Q9NZQ0 273 aa12.62□□□□□ -0.39
ACTN1-202ENST00000376839 ITM2BQ9Y287 266 aa12.62□□□□□ -0.39
ACTN1-202ENST00000376839 PNMA8CA0A1B0GUJ8 204 aa12.61□□□□□ -0.39
ACTN1-202ENST00000376839 AP3D1O14617 1153 aa12.61□□□□□ -0.39
ACTN1-202ENST00000376839 SEMA7AO75326 666 aa12.61□□□□□ -0.39
ACTN1-202ENST00000376839 IFNW1P05000 195 aa12.61□□□□□ -0.39
ACTN1-202ENST00000376839 CTSLP07711 333 aa12.61□□□□□ -0.39
ACTN1-202ENST00000376839 RPS19P39019 145 aaKnown RBP12.61□□□□□ -0.39
ACTN1-202ENST00000376839 TGM4P49221 684 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms