RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 OR10Q1Q8NGQ4 319 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 PTP4A1Q93096 173 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 PHF21AQ96BD5 680 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 PIGUQ9H490 435 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 FANCFQ9NPI8 374 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 MGAT4AQ9UM21 535 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 ABCG2Q9UNQ0 655 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 VPS9D1Q9Y2B5 631 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 YBX2Q9Y2T7 364 aaKnown RBP11.66□□□□□ -0.54
C9orf3-203ENST00000375315 WNT6Q9Y6F9 365 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 GON4LQ3T8J9 2241 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 RPS10-NUDT3A0A1W2PQS6 291 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 HCN1O60741 890 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 NCF1P14598 390 aaPredicted RBP11.66□□□□□ -0.54
C9orf3-203ENST00000375315 ZP3P21754 424 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 CSKP41240 450 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 CLDN20P56880 219 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 SERINC3Q13530 473 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 DMC1Q14565 340 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 GPR153Q6NV75 609 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 GDPGP1Q6ZNW5 385 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 ATCAYQ86WG3 371 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 TRIM69Q86WT6 500 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 UMODL1-AS1Q8N2C9 162 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 CINPQ9BW66 212 aaPredicted RBP11.66□□□□□ -0.54
C9orf3-203ENST00000375315 TFB2MQ9H5Q4 396 aaKnown RBP11.66□□□□□ -0.54
C9orf3-203ENST00000375315 IKZF5Q9H5V7 419 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 REEP1Q9H902 201 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 ABCB9Q9NP78 766 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 TSR3Q9UJK0 312 aaKnown RBP11.66□□□□□ -0.54
C9orf3-203ENST00000375315 GREB1Q4ZG55 1949 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 ATG2BQ96BY7 2078 aa11.66□□□□□ -0.54
C9orf3-203ENST00000375315 TRAV19A0A0A6YYK7 116 aa11.65□□□□□ -0.54
C9orf3-203ENST00000375315 NEDD8-MDP1E9PL57 170 aa11.65□□□□□ -0.54
C9orf3-203ENST00000375315 SLC7A4O43246 635 aa11.65□□□□□ -0.54
C9orf3-203ENST00000375315 PRAMEF12O95522 483 aa11.65□□□□□ -0.54
C9orf3-203ENST00000375315 IGLV3-27P01718 113 aa11.65□□□□□ -0.54
C9orf3-203ENST00000375315 RAB3AP20336 220 aa11.65□□□□□ -0.54
C9orf3-203ENST00000375315 ITGALP20701 1170 aa11.65□□□□□ -0.54
C9orf3-203ENST00000375315 RING1Q06587 406 aa11.65□□□□□ -0.54
C9orf3-203ENST00000375315 ATG9BQ674R7 924 aa11.65□□□□□ -0.54
C9orf3-203ENST00000375315 CILP2Q8IUL8 1156 aa11.65□□□□□ -0.54
C9orf3-203ENST00000375315 ZZZ3Q8IYH5 903 aa11.65□□□□□ -0.54
C9orf3-203ENST00000375315 RBFAQ8N0V3 343 aa11.65□□□□□ -0.54
C9orf3-203ENST00000375315 GHDCQ8N2G8 530 aa11.65□□□□□ -0.54
C9orf3-203ENST00000375315 CLP1Q92989 425 aaKnown RBP11.65□□□□□ -0.54
C9orf3-203ENST00000375315 KLHL15Q96M94 604 aa11.65□□□□□ -0.54
C9orf3-203ENST00000375315 FCRL5Q96RD9 977 aa11.65□□□□□ -0.54
C9orf3-203ENST00000375315 FAM129BQ96TA1 746 aa11.65□□□□□ -0.54
C9orf3-203ENST00000375315 HTATIP2Q9BUP3 242 aa11.65□□□□□ -0.54
C9orf3-203ENST00000375315 ZNF416Q9BWM5 594 aa11.65□□□□□ -0.54
C9orf3-203ENST00000375315 NKX2-4Q9H2Z4 354 aa11.65□□□□□ -0.54
C9orf3-203ENST00000375315 PCDHB16Q9NRJ7 776 aa11.65□□□□□ -0.54
C9orf3-203ENST00000375315 NLKQ9UBE8 527 aa11.65□□□□□ -0.54
C9orf3-203ENST00000375315 LSM7Q9UK45 103 aaKnown RBP11.65□□□□□ -0.54
C9orf3-203ENST00000375315 ACSL5Q9ULC5 683 aa11.65□□□□□ -0.54
C9orf3-203ENST00000375315 PRELID3BQ9Y3B1 194 aa11.65□□□□□ -0.54
C9orf3-203ENST00000375315 SESN1Q9Y6P5 492 aa11.65□□□□□ -0.54
C9orf3-203ENST00000375315 BPTFQ12830 3046 aa11.65□□□□□ -0.54
C9orf3-203ENST00000375315 CACNG3O60359 315 aa11.65□□□□□ -0.54
C9orf3-203ENST00000375315 HMGN1P05114 100 aa11.65□□□□□ -0.54
C9orf3-203ENST00000375315 HOXB3P14651 431 aaPredicted RBP11.65□□□□□ -0.54
C9orf3-203ENST00000375315 GGT2P36268 569 aa11.65□□□□□ -0.54
C9orf3-203ENST00000375315 VIPR2P41587 438 aa11.65□□□□□ -0.54
C9orf3-203ENST00000375315 STK19P49842 368 aaPredicted RBP11.65□□□□□ -0.54
C9orf3-203ENST00000375315 BLVRAP53004 296 aa11.65□□□□□ -0.54
C9orf3-203ENST00000375315 NFE2L1Q14494 772 aa11.65□□□□□ -0.54
C9orf3-203ENST00000375315 SEMA3AQ14563 771 aa11.65□□□□□ -0.54
C9orf3-203ENST00000375315 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.65□□□□□ -0.54
C9orf3-203ENST00000375315 METTL3Q86U44 580 aaKnown RBP11.65□□□□□ -0.54
C9orf3-203ENST00000375315 TMEM25Q86YD3 366 aa11.65□□□□□ -0.54
C9orf3-203ENST00000375315 LRRC17Q8N6Y2 441 aa11.65□□□□□ -0.54
C9orf3-203ENST00000375315 ADAMTS19Q8TE59 1207 aa11.65□□□□□ -0.54
C9orf3-203ENST00000375315 MTERF3Q96E29 417 aa11.65□□□□□ -0.54
C9orf3-203ENST00000375315 MRGPRX2Q96LB1 330 aa11.65□□□□□ -0.54
C9orf3-203ENST00000375315 PPP1R2P1Q96PQ5 205 aa11.65□□□□□ -0.54
C9orf3-203ENST00000375315 ATOH8Q96SQ7 321 aa11.65□□□□□ -0.54
C9orf3-203ENST00000375315 BPIFA1Q9NP55 256 aa11.65□□□□□ -0.54
C9orf3-203ENST00000375315 TAS2R7Q9NYW3 318 aa11.65□□□□□ -0.54
C9orf3-203ENST00000375315 PTTG3PQ9NZH4 202 aa11.65□□□□□ -0.54
C9orf3-203ENST00000375315 CPNE7Q9UBL6 633 aa11.65□□□□□ -0.54
C9orf3-203ENST00000375315 RNF112Q9ULX5 631 aa11.65□□□□□ -0.54
C9orf3-203ENST00000375315 LEFTY2O00292 366 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 FZD6O60353 706 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 FABP3P05413 133 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 RPA4Q13156 261 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 FGFBP1Q14512 234 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 RUNDC3AQ59EK9 446 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 FAHD1Q6P587 224 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 LILRA6Q6PI73 481 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 EIF3MQ7L2H7 374 aaKnown RBP11.64□□□□□ -0.55
C9orf3-203ENST00000375315 RASGRP3Q8IV61 690 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 STAG3L4Q8TBR4 150 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 SORCS1Q8WY21 1168 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 SIPA1Q96FS4 1042 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 OR51B5Q9H339 312 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 GALNT9Q9HCQ5 603 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 FAM8A1Q9UBU6 413 aa11.64□□□□□ -0.55
C9orf3-203ENST00000375315 MRPS7Q9Y2R9 242 aaKnown RBP11.64□□□□□ -0.55
C9orf3-203ENST00000375315 MRPS23Q9Y3D9 190 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms