RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 PLPP1O14494 284 aa16.28■□□□□ 0.2
RXRB-201ENST00000374680 OR1F1O43749 312 aa16.28■□□□□ 0.2
RXRB-201ENST00000374680 GABARAPO95166 117 aa16.28■□□□□ 0.2
RXRB-201ENST00000374680 GADD45GO95257 159 aa16.28■□□□□ 0.2
RXRB-201ENST00000374680 GASTP01350 101 aa16.28■□□□□ 0.2
RXRB-201ENST00000374680 TPP2P29144 1249 aaPredicted RBP16.28■□□□□ 0.2
RXRB-201ENST00000374680 ST3GAL4Q11206 333 aa16.28■□□□□ 0.2
RXRB-201ENST00000374680 FAM71E1Q6IPT2 247 aa16.28■□□□□ 0.2
RXRB-201ENST00000374680 TRIM40Q6P9F5 258 aa16.28■□□□□ 0.2
RXRB-201ENST00000374680 AMZ2Q86W34 360 aa16.28■□□□□ 0.2
RXRB-201ENST00000374680 ADGRF3Q8IZF5 1079 aa16.28■□□□□ 0.2
RXRB-201ENST00000374680 OR5D16Q8NGK9 328 aa16.28■□□□□ 0.2
RXRB-201ENST00000374680 YIPF6Q96EC8 236 aa16.28■□□□□ 0.2
RXRB-201ENST00000374680 BHLHE41Q9C0J9 482 aaPredicted RBP16.28■□□□□ 0.2
RXRB-201ENST00000374680 ANKRA2Q9H9E1 313 aa16.28■□□□□ 0.2
RXRB-201ENST00000374680 ZNF556Q9HAH1 456 aa16.28■□□□□ 0.2
RXRB-201ENST00000374680 NAALAD2Q9Y3Q0 740 aa16.28■□□□□ 0.2
RXRB-201ENST00000374680 NPIPB8E9PQR5 432 aa16.27■□□□□ 0.2
RXRB-201ENST00000374680 AIREO43918 545 aa16.27■□□□□ 0.2
RXRB-201ENST00000374680 JUNDP17535 347 aa16.27■□□□□ 0.2
RXRB-201ENST00000374680 LSM11P83369 360 aaKnown RBP eCLIP16.27■□□□□ 0.29e-11■□□□□ 9.8
RXRB-201ENST00000374680 MED22Q15528 200 aa16.27■□□□□ 0.2
RXRB-201ENST00000374680 TEAD4Q15561 434 aa16.27■□□□□ 0.2
RXRB-201ENST00000374680 DGUOKQ16854 277 aa16.27■□□□□ 0.2
RXRB-201ENST00000374680 TIGD6Q17RP2 521 aa16.27■□□□□ 0.2
RXRB-201ENST00000374680 ADGRD2Q7Z7M1 963 aa16.27■□□□□ 0.2
RXRB-201ENST00000374680 CXorf40AQ8TE69 158 aa16.27■□□□□ 0.2
RXRB-201ENST00000374680 FBLIM1Q8WUP2 373 aa16.27■□□□□ 0.2
RXRB-201ENST00000374680 XAGE5Q8WWM1 108 aa16.27■□□□□ 0.2
RXRB-201ENST00000374680 STARD8Q92502 1023 aa16.27■□□□□ 0.2
RXRB-201ENST00000374680 HRASLS5Q96KN8 279 aa16.27■□□□□ 0.2
RXRB-201ENST00000374680 MAGEB10Q96LZ2 347 aaPredicted RBP16.27■□□□□ 0.2
RXRB-201ENST00000374680 ZNF347Q96SE7 839 aa16.27■□□□□ 0.2
RXRB-201ENST00000374680 KCNK12Q9HB15 430 aa16.27■□□□□ 0.2
RXRB-201ENST00000374680 TRPC4Q9UBN4 977 aa16.27■□□□□ 0.2
RXRB-201ENST00000374680 SCN3AQ9NY46 2000 aa16.27■□□□□ 0.2
RXRB-201ENST00000374680 ADAMDEC1O15204 470 aa16.27■□□□□ 0.19
RXRB-201ENST00000374680 PTHP01270 115 aa16.27■□□□□ 0.19
RXRB-201ENST00000374680 HOXB3P14651 431 aaPredicted RBP16.27■□□□□ 0.19
RXRB-201ENST00000374680 PTNP21246 168 aa16.27■□□□□ 0.19
RXRB-201ENST00000374680 IL12RB1P42701 662 aa16.27■□□□□ 0.19
RXRB-201ENST00000374680 MADCAM1Q13477 382 aa16.27■□□□□ 0.19
RXRB-201ENST00000374680 ZNF750Q32MQ0 723 aa16.27■□□□□ 0.19
RXRB-201ENST00000374680 FAM78AQ5JUQ0 283 aa16.27■□□□□ 0.19
RXRB-201ENST00000374680 COLEC12Q5KU26 742 aa16.27■□□□□ 0.19
RXRB-201ENST00000374680 SYT6Q5T7P8 510 aaPredicted RBP16.27■□□□□ 0.19
RXRB-201ENST00000374680 C17orf64Q86WR6 236 aa16.27■□□□□ 0.19
RXRB-201ENST00000374680 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.27■□□□□ 0.19
RXRB-201ENST00000374680 PRR14Q9BWN1 585 aa16.27■□□□□ 0.19
RXRB-201ENST00000374680 SGPP1Q9BX95 441 aa16.27■□□□□ 0.19
RXRB-201ENST00000374680 RSPO3Q9BXY4 272 aaPredicted RBP16.27■□□□□ 0.19
RXRB-201ENST00000374680 NLNQ9BYT8 704 aa16.27■□□□□ 0.19
RXRB-201ENST00000374680 ZCCHC2Q9C0B9 1178 aaKnown RBP16.27■□□□□ 0.19
RXRB-201ENST00000374680 DCSTAMPQ9H295 470 aa16.27■□□□□ 0.19
RXRB-201ENST00000374680 IMP3Q9NV31 184 aaKnown RBP16.27■□□□□ 0.19
RXRB-201ENST00000374680 ZNF226Q9NYT6 803 aa16.27■□□□□ 0.19
RXRB-201ENST00000374680 DKK3Q9UBP4 350 aa16.27■□□□□ 0.19
RXRB-201ENST00000374680 ATP6V1HQ9UI12 483 aa16.27■□□□□ 0.19
RXRB-201ENST00000374680 KCNK6Q9Y257 313 aa16.27■□□□□ 0.19
RXRB-201ENST00000374680 ZNF106Q9H2Y7 1883 aaKnown RBP16.27■□□□□ 0.19
RXRB-201ENST00000374680 TRBV4-1A0A0J9YWV2 114 aa16.26■□□□□ 0.19
RXRB-201ENST00000374680 ADH1CP00326 375 aa16.26■□□□□ 0.19
RXRB-201ENST00000374680 ACP5P13686 325 aa16.26■□□□□ 0.19
RXRB-201ENST00000374680 SOX9P48436 509 aa16.26■□□□□ 0.19
RXRB-201ENST00000374680 EPHA5P54756 1037 aa16.26■□□□□ 0.19
RXRB-201ENST00000374680 SLC13A2Q13183 592 aa16.26■□□□□ 0.19
RXRB-201ENST00000374680 HNRNPA1L2Q32P51 320 aaKnown RBP16.26■□□□□ 0.19
RXRB-201ENST00000374680 GET4Q7L5D6 327 aaPredicted RBP16.26■□□□□ 0.19
RXRB-201ENST00000374680 PRSS48Q7RTY5 328 aa16.26■□□□□ 0.19
RXRB-201ENST00000374680 MCFD2Q8NI22 146 aa16.26■□□□□ 0.19
RXRB-201ENST00000374680 SUSD6Q92537 303 aa16.26■□□□□ 0.19
RXRB-201ENST00000374680 EPYCQ99645 322 aa16.26■□□□□ 0.19
RXRB-201ENST00000374680 HMG20AQ9NP66 347 aa16.26■□□□□ 0.19
RXRB-201ENST00000374680 IL23AQ9NPF7 189 aa16.26■□□□□ 0.19
RXRB-201ENST00000374680 ACER3Q9NUN7 267 aa16.26■□□□□ 0.19
RXRB-201ENST00000374680 TEX10Q9NXF1 929 aaPredicted RBP16.26■□□□□ 0.19
RXRB-201ENST00000374680 SAGE1Q9NXZ1 904 aa16.26■□□□□ 0.19
RXRB-201ENST00000374680 SERTM1A2A2V5 107 aa16.26■□□□□ 0.19
RXRB-201ENST00000374680 M0R082 166 aa16.26■□□□□ 0.19
RXRB-201ENST00000374680 LCMT2O60294 686 aaKnown RBP16.26■□□□□ 0.19
RXRB-201ENST00000374680 ERAL1O75616 437 aaKnown RBP16.26■□□□□ 0.19
RXRB-201ENST00000374680 PAPLNO95428 1278 aa16.26■□□□□ 0.19
RXRB-201ENST00000374680 C8orf89P0DMQ9 161 aa16.26■□□□□ 0.19
RXRB-201ENST00000374680 PPIBP23284 216 aaKnown RBP16.26■□□□□ 0.19
RXRB-201ENST00000374680 DSTNP60981 165 aa16.26■□□□□ 0.19
RXRB-201ENST00000374680 PTGES3Q15185 160 aaKnown RBP16.26■□□□□ 0.19
RXRB-201ENST00000374680 MICAQ29983 383 aa16.26■□□□□ 0.19
RXRB-201ENST00000374680 KIAA0907Q7Z7F0 614 aaPredicted RBP16.26■□□□□ 0.19
RXRB-201ENST00000374680 METTL4Q8N3J2 472 aa16.26■□□□□ 0.19
RXRB-201ENST00000374680 SVOPQ8N4V2 548 aa16.26■□□□□ 0.19
RXRB-201ENST00000374680 GANCQ8TET4 914 aa16.26■□□□□ 0.19
RXRB-201ENST00000374680 ZNF566Q969W8 418 aa16.26■□□□□ 0.19
RXRB-201ENST00000374680 RAD51AP1Q96B01 352 aa16.26■□□□□ 0.19
RXRB-201ENST00000374680 ZNF707Q96C28 371 aaPredicted RBP16.26■□□□□ 0.19
RXRB-201ENST00000374680 ALPK1Q96QP1 1244 aa16.26■□□□□ 0.19
RXRB-201ENST00000374680 EHD1Q9H4M9 534 aa16.26■□□□□ 0.19
RXRB-201ENST00000374680 PADI2Q9Y2J8 665 aa16.26■□□□□ 0.19
RXRB-201ENST00000374680 H3BN98 237 aa16.25■□□□□ 0.19
RXRB-201ENST00000374680 SLC9A3R1O14745 358 aaPredicted RBP16.25■□□□□ 0.19
RXRB-201ENST00000374680 PI15O43692 258 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms