RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 EEDO75530 441 aaKnown RBP10.72□□□□□ -0.69
HSPG2-202ENST00000374676 RSL1D1O76021 490 aaKnown RBP10.72□□□□□ -0.69
HSPG2-202ENST00000374676 UMODP07911 640 aa10.72□□□□□ -0.69
HSPG2-202ENST00000374676 FHP07954 510 aa10.72□□□□□ -0.69
HSPG2-202ENST00000374676 ATXN8OSP0DMR3 200 aa10.72□□□□□ -0.69
HSPG2-202ENST00000374676 WT1P19544 449 aaPredicted RBP10.72□□□□□ -0.69
HSPG2-202ENST00000374676 ITPKBP27987 946 aa10.72□□□□□ -0.69
HSPG2-202ENST00000374676 TPP2P29144 1249 aaPredicted RBP10.72□□□□□ -0.69
HSPG2-202ENST00000374676 EMP2P54851 167 aa10.72□□□□□ -0.69
HSPG2-202ENST00000374676 RPS18P62269 152 aaKnown RBP10.72□□□□□ -0.69
HSPG2-202ENST00000374676 HMGCS1Q01581 520 aa10.72□□□□□ -0.69
HSPG2-202ENST00000374676 KLC1Q07866 573 aa10.72□□□□□ -0.69
HSPG2-202ENST00000374676 SLAMF1Q13291 335 aa10.72□□□□□ -0.69
HSPG2-202ENST00000374676 IMPG1Q17R60 797 aa10.72□□□□□ -0.69
HSPG2-202ENST00000374676 SPIN4Q56A73 249 aa10.72□□□□□ -0.69
HSPG2-202ENST00000374676 GALNT18Q6P9A2 607 aa10.72□□□□□ -0.69
HSPG2-202ENST00000374676 RGS9BPQ6ZS82 235 aa10.72□□□□□ -0.69
HSPG2-202ENST00000374676 LAPTM4BQ86VI4 370 aa10.72□□□□□ -0.69
HSPG2-202ENST00000374676 SHISA5Q8N114 240 aa10.72□□□□□ -0.69
HSPG2-202ENST00000374676 ZSCAN1Q8NBB4 408 aa10.72□□□□□ -0.69
HSPG2-202ENST00000374676 PLPP5Q8NEB5 264 aa10.72□□□□□ -0.69
HSPG2-202ENST00000374676 FAM76AQ8TAV0 307 aa10.72□□□□□ -0.69
HSPG2-202ENST00000374676 SNRNP27Q8WVK2 155 aaKnown RBP10.72□□□□□ -0.69
HSPG2-202ENST00000374676 DYDC1Q8WWB3 177 aa10.72□□□□□ -0.69
HSPG2-202ENST00000374676 PEX11GQ96HA9 241 aa10.72□□□□□ -0.69
HSPG2-202ENST00000374676 MAGEB18Q96M61 343 aa10.72□□□□□ -0.69
HSPG2-202ENST00000374676 SORBS1Q9BX66 1292 aaKnown RBP10.72□□□□□ -0.69
HSPG2-202ENST00000374676 LANCL2Q9NS86 450 aa10.72□□□□□ -0.69
HSPG2-202ENST00000374676 SEMA3GQ9NS98 782 aa10.72□□□□□ -0.69
HSPG2-202ENST00000374676 LYARQ9NX58 379 aaKnown RBP10.72□□□□□ -0.69
HSPG2-202ENST00000374676 MS4A12Q9NXJ0 267 aa10.72□□□□□ -0.69
HSPG2-202ENST00000374676 MCM8Q9UJA3 840 aa10.72□□□□□ -0.69
HSPG2-202ENST00000374676 MRPS33Q9Y291 106 aaKnown RBP10.72□□□□□ -0.69
HSPG2-202ENST00000374676 FIS1Q9Y3D6 152 aa10.72□□□□□ -0.69
HSPG2-202ENST00000374676 ASB4Q9Y574 426 aa10.72□□□□□ -0.69
HSPG2-202ENST00000374676 MRPS18BQ9Y676 258 aaKnown RBP10.72□□□□□ -0.69
HSPG2-202ENST00000374676 SPACA6W5XKT8 324 aa10.72□□□□□ -0.69
HSPG2-202ENST00000374676 MGAQ8IWI9 3026 aa10.72□□□□□ -0.69
HSPG2-202ENST00000374676 CACNA1BQ00975 2339 aa10.72□□□□□ -0.69
HSPG2-202ENST00000374676 BLACEA4D250 179 aa10.71□□□□□ -0.69
HSPG2-202ENST00000374676 IDSB3KWA1 339 aa10.71□□□□□ -0.69
HSPG2-202ENST00000374676 K7ENP7 123 aa10.71□□□□□ -0.69
HSPG2-202ENST00000374676 PSMD12O00232 456 aaPredicted RBP10.71□□□□□ -0.69
HSPG2-202ENST00000374676 CYR61O00622 381 aa10.71□□□□□ -0.69
HSPG2-202ENST00000374676 PIP5K1BO14986 540 aa10.71□□□□□ -0.69
HSPG2-202ENST00000374676 NKX2-8O15522 239 aa10.71□□□□□ -0.69
HSPG2-202ENST00000374676 TMPRSS11DO60235 418 aa10.71□□□□□ -0.69
HSPG2-202ENST00000374676 JRKO75564 520 aa10.71□□□□□ -0.69
HSPG2-202ENST00000374676 KLK1P06870 262 aa10.71□□□□□ -0.69
HSPG2-202ENST00000374676 FAM58BPP0C7Q3 252 aa10.71□□□□□ -0.69
HSPG2-202ENST00000374676 LINC00032P0C843 101 aa10.71□□□□□ -0.69
HSPG2-202ENST00000374676 JAK1P23458 1154 aa10.71□□□□□ -0.69
HSPG2-202ENST00000374676 TMPRSS3P57727 454 aa10.71□□□□□ -0.69
HSPG2-202ENST00000374676 TRA2BP62995 288 aaKnown RBP10.71□□□□□ -0.69
HSPG2-202ENST00000374676 ACSM2AQ08AH3 577 aa10.71□□□□□ -0.69
HSPG2-202ENST00000374676 VAC14Q08AM6 782 aa10.71□□□□□ -0.69
HSPG2-202ENST00000374676 ERV3-1Q14264 604 aa10.71□□□□□ -0.69
HSPG2-202ENST00000374676 KIAA0040Q15053 153 aa10.71□□□□□ -0.69
HSPG2-202ENST00000374676 UGT8Q16880 541 aa10.71□□□□□ -0.69
HSPG2-202ENST00000374676 XKR7Q5GH72 579 aa10.71□□□□□ -0.69
HSPG2-202ENST00000374676 CCNYL2Q5T2Q4 361 aa10.71□□□□□ -0.69
HSPG2-202ENST00000374676 ACSM2BQ68CK6 577 aa10.71□□□□□ -0.69
HSPG2-202ENST00000374676 INO80CQ6PI98 192 aaPredicted RBP10.71□□□□□ -0.69
HSPG2-202ENST00000374676 CYP20A1Q6UW02 462 aa10.71□□□□□ -0.69
HSPG2-202ENST00000374676 TMEM205Q6UW68 189 aa10.71□□□□□ -0.69
HSPG2-202ENST00000374676 COMMD6Q7Z4G1 85 aa10.71□□□□□ -0.69
HSPG2-202ENST00000374676 CNTRLQ7Z7A1 2325 aa10.71□□□□□ -0.69
HSPG2-202ENST00000374676 GPR180Q86V85 440 aa10.71□□□□□ -0.69
HSPG2-202ENST00000374676 DDIASQ8IXT1 998 aa10.71□□□□□ -0.69
HSPG2-202ENST00000374676 ZNF595Q8IYB9 648 aa10.71□□□□□ -0.69
HSPG2-202ENST00000374676 C1orf52Q8N6N3 182 aaKnown RBP10.71□□□□□ -0.69
HSPG2-202ENST00000374676 AGR3Q8TD06 166 aa10.71□□□□□ -0.69
HSPG2-202ENST00000374676 ADAMTS17Q8TE56 1095 aa10.71□□□□□ -0.69
HSPG2-202ENST00000374676 APIPQ96GX9 242 aa10.71□□□□□ -0.69
HSPG2-202ENST00000374676 C7orf26Q96N11 449 aa10.71□□□□□ -0.69
HSPG2-202ENST00000374676 IP6K3Q96PC2 410 aa10.71□□□□□ -0.69
HSPG2-202ENST00000374676 MAPKAP1Q9BPZ7 522 aa10.71□□□□□ -0.69
HSPG2-202ENST00000374676 CRB3Q9BUF7 120 aa10.71□□□□□ -0.69
HSPG2-202ENST00000374676 SOX17Q9H6I2 414 aaPredicted RBP10.71□□□□□ -0.69
HSPG2-202ENST00000374676 PNPOQ9NVS9 261 aa10.71□□□□□ -0.69
HSPG2-202ENST00000374676 C1orf109Q9NX04 203 aa10.71□□□□□ -0.69
HSPG2-202ENST00000374676 PHF11Q9UIL8 331 aa10.71□□□□□ -0.69
HSPG2-202ENST00000374676 C3orf18Q9UK00 162 aa10.71□□□□□ -0.69
HSPG2-202ENST00000374676 FBXW2Q9UKT8 454 aa10.71□□□□□ -0.69
HSPG2-202ENST00000374676 MKL2Q9ULH7 1088 aa10.71□□□□□ -0.69
HSPG2-202ENST00000374676 MMACHCQ9Y4U1 282 aa10.71□□□□□ -0.69
HSPG2-202ENST00000374676 PIEZO2Q9H5I5 2752 aa10.71□□□□□ -0.7
HSPG2-202ENST00000374676 DOCK10Q96BY6 2186 aa10.7□□□□□ -0.7
HSPG2-202ENST00000374676 FAM227AF5H4B4 570 aa10.7□□□□□ -0.7
HSPG2-202ENST00000374676 SLCO1B7G3V0H7 640 aa10.7□□□□□ -0.7
HSPG2-202ENST00000374676 CLDN4O14493 209 aa10.7□□□□□ -0.7
HSPG2-202ENST00000374676 PROM1O43490 865 aa10.7□□□□□ -0.7
HSPG2-202ENST00000374676 CTNSO60931 367 aa10.7□□□□□ -0.7
HSPG2-202ENST00000374676 ALOX12BO75342 701 aa10.7□□□□□ -0.7
HSPG2-202ENST00000374676 GUCY1B2O75343 617 aa10.7□□□□□ -0.7
HSPG2-202ENST00000374676 HEXBP07686 556 aa10.7□□□□□ -0.7
HSPG2-202ENST00000374676 CPN2P22792 545 aa10.7□□□□□ -0.7
HSPG2-202ENST00000374676 MMP11P24347 488 aa10.7□□□□□ -0.7
HSPG2-202ENST00000374676 TLX1P31314 330 aaPredicted RBP10.7□□□□□ -0.7
HSPG2-202ENST00000374676 TIA1P31483 386 aaKnown RBP eCLIP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms