RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 KLHL31Q9H511 634 aa15.23■□□□□ 0.03
CNKSR1-202ENST00000374253 AMBNQ9NP70 447 aa15.23■□□□□ 0.03
CNKSR1-202ENST00000374253 LMCD1Q9NZU5 365 aa15.23■□□□□ 0.03
CNKSR1-202ENST00000374253 MAPRE3Q9UPY8 281 aa15.23■□□□□ 0.03
CNKSR1-202ENST00000374253 SNX5Q9Y5X3 404 aa15.23■□□□□ 0.03
CNKSR1-202ENST00000374253 LYVE1Q9Y5Y7 322 aa15.23■□□□□ 0.03
CNKSR1-202ENST00000374253 TRBV23OR9-2A0A075B6M9 112 aa15.22■□□□□ 0.03
CNKSR1-202ENST00000374253 M0R129 80 aa15.22■□□□□ 0.03
CNKSR1-202ENST00000374253 UGT2B11O75310 529 aa15.22■□□□□ 0.03
CNKSR1-202ENST00000374253 SEC14L2O76054 403 aa15.22■□□□□ 0.03
CNKSR1-202ENST00000374253 RPN2P04844 631 aa15.22■□□□□ 0.03
CNKSR1-202ENST00000374253 CEACAM5P06731 702 aa15.22■□□□□ 0.03
CNKSR1-202ENST00000374253 ERGP11308 486 aa15.22■□□□□ 0.03
CNKSR1-202ENST00000374253 C5AR1P21730 350 aa15.22■□□□□ 0.03
CNKSR1-202ENST00000374253 GSTM2P28161 218 aa15.22■□□□□ 0.03
CNKSR1-202ENST00000374253 CLDN2P57739 230 aa15.22■□□□□ 0.03
CNKSR1-202ENST00000374253 TRIM40Q6P9F5 258 aa15.22■□□□□ 0.03
CNKSR1-202ENST00000374253 RD3Q7Z3Z2 195 aa15.22■□□□□ 0.03
CNKSR1-202ENST00000374253 SLC5A8Q8N695 610 aa15.22■□□□□ 0.03
CNKSR1-202ENST00000374253 HORMAD2Q8N7B1 307 aa15.22■□□□□ 0.03
CNKSR1-202ENST00000374253 OR9Q2Q8NGE9 314 aa15.22■□□□□ 0.03
CNKSR1-202ENST00000374253 MCOLN1Q9GZU1 580 aa15.22■□□□□ 0.03
CNKSR1-202ENST00000374253 PHPT1Q9NRX4 125 aaPredicted RBP15.22■□□□□ 0.03
CNKSR1-202ENST00000374253 BLOC1S6Q9UL45 172 aa15.22■□□□□ 0.03
CNKSR1-202ENST00000374253 FAM227AF5H4B4 570 aa15.22■□□□□ 0.03
CNKSR1-202ENST00000374253 B4GALT2O60909 372 aa15.22■□□□□ 0.03
CNKSR1-202ENST00000374253 JRKO75564 520 aa15.22■□□□□ 0.03
CNKSR1-202ENST00000374253 LAMP2P13473 410 aa15.22■□□□□ 0.03
CNKSR1-202ENST00000374253 DDCP20711 480 aa15.22■□□□□ 0.03
CNKSR1-202ENST00000374253 RYKP34925 604 aa15.22■□□□□ 0.03
CNKSR1-202ENST00000374253 IGFALSP35858 605 aa15.22■□□□□ 0.03
CNKSR1-202ENST00000374253 TRIM23P36406 574 aa15.22■□□□□ 0.03
CNKSR1-202ENST00000374253 CSNK1G2P78368 415 aa15.22■□□□□ 0.03
CNKSR1-202ENST00000374253 NPRL3Q12980 569 aa15.22■□□□□ 0.03
CNKSR1-202ENST00000374253 DUSP7Q16829 419 aa15.22■□□□□ 0.03
CNKSR1-202ENST00000374253 EXOC3L2Q2M3D2 409 aa15.22■□□□□ 0.03
CNKSR1-202ENST00000374253 ZC3H12BQ5HYM0 836 aaKnown RBP15.22■□□□□ 0.03
CNKSR1-202ENST00000374253 AP1ARQ63HQ0 302 aa15.22■□□□□ 0.03
CNKSR1-202ENST00000374253 PIWIL3Q7Z3Z3 882 aaKnown RBP15.22■□□□□ 0.03
CNKSR1-202ENST00000374253 UBE3DQ7Z6J8 389 aa15.22■□□□□ 0.03
CNKSR1-202ENST00000374253 THAP11Q96EK4 314 aa15.22■□□□□ 0.03
CNKSR1-202ENST00000374253 CAMK1GQ96NX5 476 aa15.22■□□□□ 0.03
CNKSR1-202ENST00000374253 SLC17A9Q9BYT1 436 aa15.22■□□□□ 0.03
CNKSR1-202ENST00000374253 AICDAQ9GZX7 198 aa15.22■□□□□ 0.03
CNKSR1-202ENST00000374253 AHSPQ9NZD4 102 aa15.22■□□□□ 0.03
CNKSR1-202ENST00000374253 SCHIP1Q9P0W5 487 aaPredicted RBP15.22■□□□□ 0.03
CNKSR1-202ENST00000374253 SCN3AQ9NY46 2000 aa15.22■□□□□ 0.03
CNKSR1-202ENST00000374253 H0Y8X5 98 aa15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 NDUFS4O43181 175 aa15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 NOL3O60936 208 aaKnown RBP15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 ADH1BP00325 375 aa15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 BCHEP06276 602 aa15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 MAGEA10P43363 369 aaPredicted RBP15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 KIR2DL1P43626 348 aaPredicted RBP15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 PPP2CBP62714 309 aa15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 PPP2CAP67775 309 aa15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 EMX1Q04741 257 aaPredicted RBP15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 LRRC74AQ0VAA2 488 aa15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 TP53BP2Q13625 1128 aa15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 DGCR6Q14129 220 aa15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 SPDYE7PQ495Y7 208 aa15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 IFI44LQ53G44 452 aa15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 TMEM196Q5HYL7 178 aa15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 KIAA1614Q5VZ46 1190 aa15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 GTF2IRD2BQ6EKJ0 949 aa15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 GTF2IRD2Q86UP8 949 aa15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 TEFMQ96QE5 360 aaKnown RBP15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 NIPSNAP1Q9BPW8 284 aa15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 SPATA9Q9BWV2 254 aa15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 NLNQ9BYT8 704 aa15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 TIMMDC1Q9NPL8 285 aa15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 PADI2Q9Y2J8 665 aa15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 CAPN5O15484 640 aaPredicted RBP15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 PCDHGA12O60330 932 aa15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 RNGTTO60942 597 aaKnown RBP15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 FADS2O95864 444 aaKnown RBP15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 COL9A1P20849 921 aa15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 HTR1BP28222 390 aa15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 GP2P55259 537 aaKnown RBP15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 DSTNP60981 165 aa15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 LSM3P62310 102 aaKnown RBP15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 HPCAP84074 193 aa15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 REEP5Q00765 189 aa15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 EEF1A2Q05639 463 aaKnown RBP15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 NPTX1Q15818 432 aa15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 C10orf62Q5T681 223 aaPredicted RBP15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 ZNF776Q68DI1 518 aaPredicted RBP15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 ALDH16A1Q8IZ83 802 aa15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 ZNF540Q8NDQ6 660 aa15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 ABHD11Q8NFV4 315 aa15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 OR2A1Q8NGT9 310 aa15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 TBC1D20Q96BZ9 403 aa15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 FUNDC2Q9BWH2 189 aa15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 RSPO3Q9BXY4 272 aaPredicted RBP15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 RHBGQ9H310 441 aa15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 SYNPO2LQ9H987 977 aa15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 WASH6PQ9NQA3 447 aa15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 DZANK1Q9NVP4 752 aa15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 SPHK1Q9NYA1 384 aa15.21■□□□□ 0.03
CNKSR1-202ENST00000374253 NDRG4Q9ULP0 352 aaKnown RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms