RNA–Protein interactions for RNA: ENST00000372736.3

COL9A2-201, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-201ENST00000372736 CMTM7Q96FZ5 175 aa21.23■□□□□ 0.99
COL9A2-201ENST00000372736 ZNF354BQ96LW1 612 aa21.23■□□□□ 0.99
COL9A2-201ENST00000372736 MRPL57Q9BQC6 102 aaKnown RBP21.23■□□□□ 0.99
COL9A2-201ENST00000372736 ROGDIQ9GZN7 287 aa21.23■□□□□ 0.99
COL9A2-201ENST00000372736 MRPL46Q9H2W6 279 aaKnown RBP21.23■□□□□ 0.99
COL9A2-201ENST00000372736 OR51B5Q9H339 312 aa21.23■□□□□ 0.99
COL9A2-201ENST00000372736 PRTFDC1Q9NRG1 225 aa21.23■□□□□ 0.99
COL9A2-201ENST00000372736 STMN3Q9NZ72 180 aa21.23■□□□□ 0.99
COL9A2-201ENST00000372736 KCMF1Q9P0J7 381 aa21.23■□□□□ 0.99
COL9A2-201ENST00000372736 ADGRE2Q9UHX3 823 aa21.23■□□□□ 0.99
COL9A2-201ENST00000372736 PCTPQ9UKL6 214 aa21.23■□□□□ 0.99
COL9A2-201ENST00000372736 MRPS33Q9Y291 106 aaKnown RBP21.23■□□□□ 0.99
COL9A2-201ENST00000372736 OR5H15A6NDH6 313 aa21.22■□□□□ 0.99
COL9A2-201ENST00000372736 OR7A17O14581 309 aa21.22■□□□□ 0.99
COL9A2-201ENST00000372736 SLC29A2Q14542 456 aa21.22■□□□□ 0.99
COL9A2-201ENST00000372736 RPUSD3Q6P087 351 aaKnown RBP21.22■□□□□ 0.99
COL9A2-201ENST00000372736 CHSY3Q70JA7 882 aa21.22■□□□□ 0.99
COL9A2-201ENST00000372736 TMEM151AQ8N4L1 468 aa21.22■□□□□ 0.99
COL9A2-201ENST00000372736 ACOT4Q8N9L9 421 aa21.22■□□□□ 0.99
COL9A2-201ENST00000372736 OR52B6Q8NGF0 335 aa21.22■□□□□ 0.99
COL9A2-201ENST00000372736 GRHL3Q8TE85 626 aa21.22■□□□□ 0.99
COL9A2-201ENST00000372736 MTBPQ96DY7 904 aa21.22■□□□□ 0.99
COL9A2-201ENST00000372736 MTERF1Q99551 399 aaKnown RBP21.22■□□□□ 0.99
COL9A2-201ENST00000372736 MAPKAP1Q9BPZ7 522 aa21.22■□□□□ 0.99
COL9A2-201ENST00000372736 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP21.22■□□□□ 0.99
COL9A2-201ENST00000372736 LYRM4Q9HD34 91 aa21.22■□□□□ 0.99
COL9A2-201ENST00000372736 FETUBQ9UGM5 382 aa21.22■□□□□ 0.99
COL9A2-201ENST00000372736 RNF11Q9Y3C5 154 aa21.22■□□□□ 0.99
COL9A2-201ENST00000372736 PCDHGA11Q9Y5H2 935 aa21.22■□□□□ 0.99
COL9A2-201ENST00000372736 SAP18O00422 153 aaKnown RBP21.21■□□□□ 0.99
COL9A2-201ENST00000372736 CLDN4O14493 209 aa21.21■□□□□ 0.99
COL9A2-201ENST00000372736 SMIM24O75264 130 aa21.21■□□□□ 0.99
COL9A2-201ENST00000372736 CBX6O95503 412 aa21.21■□□□□ 0.99
COL9A2-201ENST00000372736 RPS17P08708 135 aaKnown RBP21.21■□□□□ 0.99
COL9A2-201ENST00000372736 HIST1H1TP22492 207 aaPredicted RBP21.21■□□□□ 0.99
COL9A2-201ENST00000372736 PPP2R1BP30154 601 aa21.21■□□□□ 0.99
COL9A2-201ENST00000372736 SLC13A2Q13183 592 aa21.21■□□□□ 0.99
COL9A2-201ENST00000372736 RCN2Q14257 317 aa21.21■□□□□ 0.99
COL9A2-201ENST00000372736 TERF2Q15554 542 aa21.21■□□□□ 0.99
COL9A2-201ENST00000372736 CPSF6Q16630 551 aaKnown RBP eCLIP21.21■□□□□ 0.99
COL9A2-201ENST00000372736 TEX35Q5T0J7 233 aa21.21■□□□□ 0.99
COL9A2-201ENST00000372736 DEPDC1Q5TB30 811 aa21.21■□□□□ 0.99
COL9A2-201ENST00000372736 LGSNQ5TDP6 509 aa21.21■□□□□ 0.99
COL9A2-201ENST00000372736 CLNKQ7Z7G1 428 aa21.21■□□□□ 0.99
COL9A2-201ENST00000372736 SLC5A8Q8N695 610 aa21.21■□□□□ 0.99
COL9A2-201ENST00000372736 NSUN5Q96P11 429 aaKnown RBP21.21■□□□□ 0.99
COL9A2-201ENST00000372736 SORBS1Q9BX66 1292 aaKnown RBP21.21■□□□□ 0.99
COL9A2-201ENST00000372736 NOL11Q9H8H0 719 aaKnown RBP21.21■□□□□ 0.99
COL9A2-201ENST00000372736 ZBTB26Q9HCK0 441 aa21.21■□□□□ 0.99
COL9A2-201ENST00000372736 PRM3Q9NNZ6 103 aa21.21■□□□□ 0.99
COL9A2-201ENST00000372736 AGPAT4Q9NRZ5 378 aa21.21■□□□□ 0.99
COL9A2-201ENST00000372736 PSMC3IPQ9P2W1 217 aaPredicted RBP21.21■□□□□ 0.99
COL9A2-201ENST00000372736 USP9YO00507 2555 aaPredicted RBP21.21■□□□□ 0.99
COL9A2-201ENST00000372736 A8MUA0 341 aa21.2■□□□□ 0.98
COL9A2-201ENST00000372736 SSR2P43308 183 aa21.2■□□□□ 0.98
COL9A2-201ENST00000372736 TAS2R50P59544 299 aa21.2■□□□□ 0.98
COL9A2-201ENST00000372736 RPS13P62277 151 aaKnown RBP21.2■□□□□ 0.98
COL9A2-201ENST00000372736 TRAF3Q13114 568 aa21.2■□□□□ 0.98
COL9A2-201ENST00000372736 INAQ16352 499 aa21.2■□□□□ 0.98
COL9A2-201ENST00000372736 MEP1AQ16819 746 aa21.2■□□□□ 0.98
COL9A2-201ENST00000372736 AP5B1Q2VPB7 878 aa21.2■□□□□ 0.98
COL9A2-201ENST00000372736 LGI4Q8N135 537 aa21.2■□□□□ 0.98
COL9A2-201ENST00000372736 WDR20Q8TBZ3 569 aa21.2■□□□□ 0.98
COL9A2-201ENST00000372736 REPS1Q96D71 796 aa21.2■□□□□ 0.98
COL9A2-201ENST00000372736 CDK15Q96Q40 435 aa21.2■□□□□ 0.98
COL9A2-201ENST00000372736 TAAR6Q96RI8 345 aa21.2■□□□□ 0.98
COL9A2-201ENST00000372736 SPTAN1Q13813 2472 aaKnown RBP21.2■□□□□ 0.98
COL9A2-201ENST00000372736 SVILO95425 2214 aa21.2■□□□□ 0.98
COL9A2-201ENST00000372736 POLEQ07864 2286 aa21.19■□□□□ 0.98
COL9A2-201ENST00000372736 A8MT66 165 aa21.19■□□□□ 0.98
COL9A2-201ENST00000372736 PLPP1O14494 284 aa21.19■□□□□ 0.98
COL9A2-201ENST00000372736 MYO1DO94832 1006 aa21.19■□□□□ 0.98
COL9A2-201ENST00000372736 CLDN9O95484 217 aa21.19■□□□□ 0.98
COL9A2-201ENST00000372736 TNFRSF8P28908 595 aa21.19■□□□□ 0.98
COL9A2-201ENST00000372736 TUBA3CQ13748 450 aa21.19■□□□□ 0.98
COL9A2-201ENST00000372736 ZRSR2Q15696 482 aaKnown RBP21.19■□□□□ 0.98
COL9A2-201ENST00000372736 TUBA3EQ6PEY2 450 aa21.19■□□□□ 0.98
COL9A2-201ENST00000372736 FAM180AQ6UWF9 173 aa21.19■□□□□ 0.98
COL9A2-201ENST00000372736 APCDD1LQ8NCL9 501 aa21.19■□□□□ 0.98
COL9A2-201ENST00000372736 B3GNT7Q8NFL0 401 aa21.19■□□□□ 0.98
COL9A2-201ENST00000372736 MZB1Q8WU39 189 aa21.19■□□□□ 0.98
COL9A2-201ENST00000372736 FAR1Q8WVX9 515 aa21.19■□□□□ 0.98
COL9A2-201ENST00000372736 ZNF717Q9BY31 904 aaPredicted RBP21.19■□□□□ 0.98
COL9A2-201ENST00000372736 PNO1Q9NRX1 252 aaKnown RBP21.19■□□□□ 0.98
COL9A2-201ENST00000372736 PPIEQ9UNP9 301 aaKnown RBP21.19■□□□□ 0.98
COL9A2-201ENST00000372736 IQANK1A0A1B0GTG1 560 aa21.18■□□□□ 0.98
COL9A2-201ENST00000372736 ANKUB1A6NFN9 424 aa21.18■□□□□ 0.98
COL9A2-201ENST00000372736 GABRR3A8MPY1 467 aa21.18■□□□□ 0.98
COL9A2-201ENST00000372736 PRAMEF2O60811 474 aa21.18■□□□□ 0.98
COL9A2-201ENST00000372736 CTNSO60931 367 aa21.18■□□□□ 0.98
COL9A2-201ENST00000372736 ETHE1O95571 254 aa21.18■□□□□ 0.98
COL9A2-201ENST00000372736 ST13P50502 369 aaKnown RBP21.18■□□□□ 0.98
COL9A2-201ENST00000372736 CCNG1P51959 295 aa21.18■□□□□ 0.98
COL9A2-201ENST00000372736 RAP1GDS1P52306 607 aa21.18■□□□□ 0.98
COL9A2-201ENST00000372736 PHEXP78562 749 aa21.18■□□□□ 0.98
COL9A2-201ENST00000372736 EIF2S3LQ2VIR3 472 aaKnown RBP21.18■□□□□ 0.98
COL9A2-201ENST00000372736 OR4C11Q6IEV9 310 aa21.18■□□□□ 0.98
COL9A2-201ENST00000372736 RPS27LQ71UM5 84 aaKnown RBP21.18■□□□□ 0.98
COL9A2-201ENST00000372736 ST6GALNAC3Q8NDV1 305 aa21.18■□□□□ 0.98
COL9A2-201ENST00000372736 MDS2Q8NDY4 140 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms