RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 CRTC2Q53ET0 693 aaPredicted RBP9.92□□□□□ -0.82
COL5A1-202ENST00000371820 TTC23Q5W5X9 447 aa9.92□□□□□ -0.82
COL5A1-202ENST00000371820 GPRIN3Q6ZVF9 776 aa9.92□□□□□ -0.82
COL5A1-202ENST00000371820 PATL1Q86TB9 770 aaKnown RBP9.92□□□□□ -0.82
COL5A1-202ENST00000371820 ADAMTSL2Q86TH1 951 aa9.92□□□□□ -0.82
COL5A1-202ENST00000371820 AMIGO1Q86WK6 493 aa9.92□□□□□ -0.82
COL5A1-202ENST00000371820 MYO1HQ8N1T3 1032 aa9.92□□□□□ -0.82
COL5A1-202ENST00000371820 D2HGDHQ8N465 521 aa9.92□□□□□ -0.82
COL5A1-202ENST00000371820 SPATA6LQ8N4H0 392 aa9.92□□□□□ -0.82
COL5A1-202ENST00000371820 RNF148Q8N7C7 305 aa9.92□□□□□ -0.82
COL5A1-202ENST00000371820 DRAXINQ8NBI3 349 aaPredicted RBP9.92□□□□□ -0.82
COL5A1-202ENST00000371820 PDPRQ8NCN5 879 aa9.92□□□□□ -0.82
COL5A1-202ENST00000371820 OR4E2Q8NGC2 313 aa9.92□□□□□ -0.82
COL5A1-202ENST00000371820 OR52E1Q8NGJ3 308 aa9.92□□□□□ -0.82
COL5A1-202ENST00000371820 FAM81AQ8TBF8 368 aa9.92□□□□□ -0.82
COL5A1-202ENST00000371820 CANT1Q8WVQ1 401 aa9.92□□□□□ -0.82
COL5A1-202ENST00000371820 ASZ1Q8WWH4 475 aa9.92□□□□□ -0.82
COL5A1-202ENST00000371820 SLCO4A1Q96BD0 722 aa9.92□□□□□ -0.82
COL5A1-202ENST00000371820 SDCCAG3Q96C92 435 aa9.92□□□□□ -0.82
COL5A1-202ENST00000371820 ZNF382Q96SR6 550 aa9.92□□□□□ -0.82
COL5A1-202ENST00000371820 KCTD14Q9BQ13 255 aaPredicted RBP9.92□□□□□ -0.82
COL5A1-202ENST00000371820 SLC25A18Q9H1K4 315 aa9.92□□□□□ -0.82
COL5A1-202ENST00000371820 ADNPQ9H2P0 1102 aa9.92□□□□□ -0.82
COL5A1-202ENST00000371820 PLGRKTQ9HBL7 147 aa9.92□□□□□ -0.82
COL5A1-202ENST00000371820 LATS2Q9NRM7 1088 aa9.92□□□□□ -0.82
COL5A1-202ENST00000371820 AGPAT4Q9NRZ5 378 aa9.92□□□□□ -0.82
COL5A1-202ENST00000371820 FGF21Q9NSA1 209 aa9.92□□□□□ -0.82
COL5A1-202ENST00000371820 OLAHQ9NV23 265 aa9.92□□□□□ -0.82
COL5A1-202ENST00000371820 DDX18Q9NVP1 670 aaKnown RBP9.92□□□□□ -0.82
COL5A1-202ENST00000371820 GNPTGQ9UJJ9 305 aa9.92□□□□□ -0.82
COL5A1-202ENST00000371820 EIF3LQ9Y262 564 aaKnown RBP9.92□□□□□ -0.82
COL5A1-202ENST00000371820 BTRCQ9Y297 605 aa9.92□□□□□ -0.82
COL5A1-202ENST00000371820 CEPT1Q9Y6K0 416 aa9.92□□□□□ -0.82
COL5A1-202ENST00000371820 LOC101059948A0A1B0GTJ6 334 aa9.91□□□□□ -0.82
COL5A1-202ENST00000371820 SLC5A10A0PJK1 596 aa9.91□□□□□ -0.82
COL5A1-202ENST00000371820 C7orf72A4D263 438 aa9.91□□□□□ -0.82
COL5A1-202ENST00000371820 TRIM64A6NGJ6 449 aa9.91□□□□□ -0.82
COL5A1-202ENST00000371820 E5RI56 91 aa9.91□□□□□ -0.82
COL5A1-202ENST00000371820 UBFD1O14562 309 aaKnown RBP9.91□□□□□ -0.82
COL5A1-202ENST00000371820 CLOCKO15516 846 aa9.91□□□□□ -0.82
COL5A1-202ENST00000371820 RGS14O43566 566 aa9.91□□□□□ -0.82
COL5A1-202ENST00000371820 CPNE3O75131 537 aaKnown RBP9.91□□□□□ -0.82
COL5A1-202ENST00000371820 OTCP00480 354 aa9.91□□□□□ -0.82
COL5A1-202ENST00000371820 EBLN1P0CF75 366 aa9.91□□□□□ -0.82
COL5A1-202ENST00000371820 MTHFD2P13995 350 aa9.91□□□□□ -0.82
COL5A1-202ENST00000371820 IL1RNP18510 177 aa9.91□□□□□ -0.82
COL5A1-202ENST00000371820 CDH2P19022 906 aaPredicted RBP9.91□□□□□ -0.82
COL5A1-202ENST00000371820 TCN2P20062 427 aa9.91□□□□□ -0.82
COL5A1-202ENST00000371820 SLC6A2P23975 617 aa9.91□□□□□ -0.82
COL5A1-202ENST00000371820 PDHA2P29803 388 aa9.91□□□□□ -0.82
COL5A1-202ENST00000371820 CAPGP40121 348 aa9.91□□□□□ -0.82
COL5A1-202ENST00000371820 PPP1CAP62136 330 aa9.91□□□□□ -0.82
COL5A1-202ENST00000371820 RCAN2Q14206 197 aa9.91□□□□□ -0.82
COL5A1-202ENST00000371820 FXNQ16595 210 aa9.91□□□□□ -0.82
COL5A1-202ENST00000371820 NRF1Q16656 503 aa9.91□□□□□ -0.82
COL5A1-202ENST00000371820 ZNF789Q5FWF6 425 aa9.91□□□□□ -0.82
COL5A1-202ENST00000371820 RBM48Q5RL73 367 aaKnown RBP9.91□□□□□ -0.82
COL5A1-202ENST00000371820 C6orf10Q5SRN2 563 aa9.91□□□□□ -0.82
COL5A1-202ENST00000371820 PTRHD1Q6GMV3 140 aaKnown RBP9.91□□□□□ -0.82
COL5A1-202ENST00000371820 DHRS4L2Q6PKH6 230 aa9.91□□□□□ -0.82
COL5A1-202ENST00000371820 TMEM207Q6UWW9 146 aa9.91□□□□□ -0.82
COL5A1-202ENST00000371820 LINC00299Q6ZSB3 139 aa9.91□□□□□ -0.82
COL5A1-202ENST00000371820 TIPARPQ7Z3E1 657 aaKnown RBP9.91□□□□□ -0.82
COL5A1-202ENST00000371820 OR8J3Q8NGG0 315 aa9.91□□□□□ -0.82
COL5A1-202ENST00000371820 STARD8Q92502 1023 aa9.91□□□□□ -0.82
COL5A1-202ENST00000371820 VPS33AQ96AX1 596 aa9.91□□□□□ -0.82
COL5A1-202ENST00000371820 PTERQ96BW5 349 aa9.91□□□□□ -0.82
COL5A1-202ENST00000371820 AURKBQ96GD4 344 aaPredicted RBP9.91□□□□□ -0.82
COL5A1-202ENST00000371820 MARK4Q96L34 752 aa9.91□□□□□ -0.82
COL5A1-202ENST00000371820 NSMCE2Q96MF7 247 aa9.91□□□□□ -0.82
COL5A1-202ENST00000371820 GRIP2Q9C0E4 1043 aa9.91□□□□□ -0.82
COL5A1-202ENST00000371820 ALG2Q9H553 416 aa9.91□□□□□ -0.82
COL5A1-202ENST00000371820 SMPD3Q9NY59 655 aaPredicted RBP9.91□□□□□ -0.82
COL5A1-202ENST00000371820 BLOC1S6Q9UL45 172 aa9.91□□□□□ -0.82
COL5A1-202ENST00000371820 PADI1Q9ULC6 663 aa9.91□□□□□ -0.82
COL5A1-202ENST00000371820 MAPRE3Q9UPY8 281 aa9.91□□□□□ -0.82
COL5A1-202ENST00000371820 DHRS7Q9Y394 339 aa9.91□□□□□ -0.82
COL5A1-202ENST00000371820 RNF11Q9Y3C5 154 aa9.91□□□□□ -0.82
COL5A1-202ENST00000371820 PRSS21Q9Y6M0 314 aa9.91□□□□□ -0.82
COL5A1-202ENST00000371820 NAV2Q8IVL1 2488 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 PIPSLA2A3N6 862 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 C21orf140B9A014 251 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 EIF3FO00303 357 aaPredicted RBP9.9□□□□□ -0.82
COL5A1-202ENST00000371820 BTN3A1O00481 513 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 NME4O00746 187 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 RECKO95980 971 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 ALBP02768 609 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 KLK3P07288 261 aaPredicted RBP9.9□□□□□ -0.82
COL5A1-202ENST00000371820 ALDOCP09972 364 aaKnown RBP9.9□□□□□ -0.82
COL5A1-202ENST00000371820 MSL3P1P0C860 447 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 CDH1P12830 882 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 FOLR1P15328 257 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 RPS3P23396 243 aaKnown RBP eCLIP9.9□□□□□ -0.82
COL5A1-202ENST00000371820 ACADLP28330 430 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 PRDX3P30048 256 aaKnown RBP9.9□□□□□ -0.82
COL5A1-202ENST00000371820 HMOX2P30519 316 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 FMO4P31512 558 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 MSX2P35548 267 aaPredicted RBP9.9□□□□□ -0.82
COL5A1-202ENST00000371820 DLSTP36957 453 aa9.9□□□□□ -0.82
COL5A1-202ENST00000371820 KCNC1P48547 511 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms