RNA–Protein interactions for RNA: ENST00000370397.7

CHUK-201, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHUK, Length 3,625 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-201ENST00000370397 KRT73Q86Y46 540 aa16.76■□□□□ 0.27
CHUK-201ENST00000370397 ADAMTS19Q8TE59 1207 aa16.76■□□□□ 0.27
CHUK-201ENST00000370397 TRAF4Q9BUZ4 470 aaPredicted RBP16.76■□□□□ 0.27
CHUK-201ENST00000370397 BBS2Q9BXC9 721 aa16.76■□□□□ 0.27
CHUK-201ENST00000370397 BRF2Q9HAW0 419 aa16.76■□□□□ 0.27
CHUK-201ENST00000370397 TXNL4BQ9NX01 149 aaKnown RBP16.76■□□□□ 0.27
CHUK-201ENST00000370397 ZNF282Q9UDV7 671 aaPredicted RBP16.76■□□□□ 0.27
CHUK-201ENST00000370397 ATP6V1HQ9UI12 483 aa16.76■□□□□ 0.27
CHUK-201ENST00000370397 COL4A6Q14031 1691 aa16.76■□□□□ 0.27
CHUK-201ENST00000370397 ADAM12O43184 909 aa16.76■□□□□ 0.27
CHUK-201ENST00000370397 LHCGRP22888 699 aa16.76■□□□□ 0.27
CHUK-201ENST00000370397 EFNB1P98172 346 aa16.76■□□□□ 0.27
CHUK-201ENST00000370397 BNC1Q01954 994 aa16.76■□□□□ 0.27
CHUK-201ENST00000370397 SEMG2Q02383 582 aa16.76■□□□□ 0.27
CHUK-201ENST00000370397 FCHO2Q0JRZ9 810 aa16.76■□□□□ 0.27
CHUK-201ENST00000370397 SP140Q13342 867 aa16.76■□□□□ 0.27
CHUK-201ENST00000370397 PDE7AQ13946 482 aa16.76■□□□□ 0.27
CHUK-201ENST00000370397 SCARB2Q14108 478 aa16.76■□□□□ 0.27
CHUK-201ENST00000370397 DOC2AQ14183 400 aa16.76■□□□□ 0.27
CHUK-201ENST00000370397 FAM214AQ32MH5 1076 aa16.76■□□□□ 0.27
CHUK-201ENST00000370397 PTCHD4Q6ZW05 846 aa16.76■□□□□ 0.27
CHUK-201ENST00000370397 FAM46DQ8NEK8 389 aa16.76■□□□□ 0.27
CHUK-201ENST00000370397 OR52N2Q8NGI0 321 aa16.76■□□□□ 0.27
CHUK-201ENST00000370397 ATG10Q9H0Y0 220 aa16.76■□□□□ 0.27
CHUK-201ENST00000370397 AFF4Q9UHB7 1163 aaKnown RBP16.76■□□□□ 0.27
CHUK-201ENST00000370397 TMA7Q9Y2S6 64 aaKnown RBP16.76■□□□□ 0.27
CHUK-201ENST00000370397 NINQ8N4C6 2090 aa16.76■□□□□ 0.27
CHUK-201ENST00000370397 TRBV4-1A0A0J9YWV2 114 aa16.76■□□□□ 0.27
CHUK-201ENST00000370397 GPC1P35052 558 aa16.76■□□□□ 0.27
CHUK-201ENST00000370397 GZMKP49863 264 aa16.76■□□□□ 0.27
CHUK-201ENST00000370397 GANABQ14697 944 aaKnown RBP16.76■□□□□ 0.27
CHUK-201ENST00000370397 NCF4Q15080 339 aa16.76■□□□□ 0.27
CHUK-201ENST00000370397 CLDN22Q8N7P3 220 aa16.76■□□□□ 0.27
CHUK-201ENST00000370397 ENPP4Q9Y6X5 453 aa16.76■□□□□ 0.27
CHUK-201ENST00000370397 LAMA2P24043 3122 aaKnown RBP16.76■□□□□ 0.27
CHUK-201ENST00000370397 A8MX80 341 aa16.75■□□□□ 0.27
CHUK-201ENST00000370397 POLR1CO15160 346 aaPredicted RBP16.75■□□□□ 0.27
CHUK-201ENST00000370397 SLC16A5O15375 505 aa16.75■□□□□ 0.27
CHUK-201ENST00000370397 RGS5O15539 181 aa16.75■□□□□ 0.27
CHUK-201ENST00000370397 CTGFP29279 349 aa16.75■□□□□ 0.27
CHUK-201ENST00000370397 CSKP41240 450 aa16.75■□□□□ 0.27
CHUK-201ENST00000370397 DGKEP52429 567 aa16.75■□□□□ 0.27
CHUK-201ENST00000370397 SCN1BQ07699 218 aa16.75■□□□□ 0.27
CHUK-201ENST00000370397 MLLT11Q13015 90 aaPredicted RBP16.75■□□□□ 0.27
CHUK-201ENST00000370397 DGKKQ5KSL6 1271 aa16.75■□□□□ 0.27
CHUK-201ENST00000370397 MEDAGQ5VYS4 303 aa16.75■□□□□ 0.27
CHUK-201ENST00000370397 PAMR1Q6UXH9 720 aa16.75■□□□□ 0.27
CHUK-201ENST00000370397 SERPINA13PQ6UXR4 307 aa16.75■□□□□ 0.27
CHUK-201ENST00000370397 TAS1R1Q7RTX1 841 aa16.75■□□□□ 0.27
CHUK-201ENST00000370397 BCDIN3DQ7Z5W3 292 aaKnown RBP16.75■□□□□ 0.27
CHUK-201ENST00000370397 GLCCI1Q86VQ1 547 aa16.75■□□□□ 0.27
CHUK-201ENST00000370397 SLC44A2Q8IWA5 706 aaPredicted RBP16.75■□□□□ 0.27
CHUK-201ENST00000370397 APCDD1Q8J025 514 aa16.75■□□□□ 0.27
CHUK-201ENST00000370397 ZIC5Q96T25 663 aa16.75■□□□□ 0.27
CHUK-201ENST00000370397 RACGAP1Q9H0H5 632 aa16.75■□□□□ 0.27
CHUK-201ENST00000370397 RC3H2Q9HBD1 1191 aaKnown RBP16.75■□□□□ 0.27
CHUK-201ENST00000370397 KLHL21Q9UJP4 597 aa16.75■□□□□ 0.27
CHUK-201ENST00000370397 DENND4CQ5VZ89 1909 aa16.75■□□□□ 0.27
CHUK-201ENST00000370397 IL1AP01583 271 aa16.75■□□□□ 0.27
CHUK-201ENST00000370397 ZNF30P17039 623 aa16.75■□□□□ 0.27
CHUK-201ENST00000370397 FEN1P39748 380 aaKnown RBP16.75■□□□□ 0.27
CHUK-201ENST00000370397 RBBP4Q09028 425 aa16.75■□□□□ 0.27
CHUK-201ENST00000370397 GRHL2Q6ISB3 625 aa16.75■□□□□ 0.27
CHUK-201ENST00000370397 OR4A15Q8NGL6 344 aa16.75■□□□□ 0.27
CHUK-201ENST00000370397 HUS1BQ8NHY5 278 aa16.75■□□□□ 0.27
CHUK-201ENST00000370397 GEMIN6Q8WXD5 167 aaKnown RBP16.75■□□□□ 0.27
CHUK-201ENST00000370397 PPP1R3EQ9H7J1 279 aa16.75■□□□□ 0.27
CHUK-201ENST00000370397 CLN6Q9NWW5 311 aa16.75■□□□□ 0.27
CHUK-201ENST00000370397 TESQ9UGI8 421 aaKnown RBP16.75■□□□□ 0.27
CHUK-201ENST00000370397 ADAMTS4O75173 837 aa16.75■□□□□ 0.27
CHUK-201ENST00000370397 CPN2P22792 545 aa16.75■□□□□ 0.27
CHUK-201ENST00000370397 CD83Q01151 205 aa16.75■□□□□ 0.27
CHUK-201ENST00000370397 DMC1Q14565 340 aa16.75■□□□□ 0.27
CHUK-201ENST00000370397 CCSAPQ6IQ19 270 aaPredicted RBP16.75■□□□□ 0.27
CHUK-201ENST00000370397 TMEM173Q86WV6 379 aaPredicted RBP16.75■□□□□ 0.27
CHUK-201ENST00000370397 YIPF7Q8N8F6 280 aa16.75■□□□□ 0.27
CHUK-201ENST00000370397 GDPD1Q8N9F7 314 aa16.75■□□□□ 0.27
CHUK-201ENST00000370397 WRAP53Q9BUR4 548 aaKnown RBP16.75■□□□□ 0.27
CHUK-201ENST00000370397 TMEM245Q9H330 911 aa16.75■□□□□ 0.27
CHUK-201ENST00000370397 RHCGQ9UBD6 479 aa16.75■□□□□ 0.27
CHUK-201ENST00000370397 ACSL6Q9UKU0 697 aa16.75■□□□□ 0.27
CHUK-201ENST00000370397 NDRG2Q9UN36 371 aaKnown RBP16.75■□□□□ 0.27
CHUK-201ENST00000370397 ICMTO60725 284 aa16.74■□□□□ 0.27
CHUK-201ENST00000370397 CRYZL1O95825 349 aa16.74■□□□□ 0.27
CHUK-201ENST00000370397 HTR2BP41595 481 aa16.74■□□□□ 0.27
CHUK-201ENST00000370397 CSNK1DP48730 415 aa16.74■□□□□ 0.27
CHUK-201ENST00000370397 ZNF91Q05481 1191 aa16.74■□□□□ 0.27
CHUK-201ENST00000370397 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.74■□□□□ 0.27
CHUK-201ENST00000370397 PROKR2Q8NFJ6 384 aa16.74■□□□□ 0.27
CHUK-201ENST00000370397 KIAA1143Q96AT1 154 aaPredicted RBP16.74■□□□□ 0.27
CHUK-201ENST00000370397 IL4I1Q96RQ9 567 aa16.74■□□□□ 0.27
CHUK-201ENST00000370397 BHLHE41Q9C0J9 482 aaPredicted RBP16.74■□□□□ 0.27
CHUK-201ENST00000370397 IRF2BPLQ9H1B7 796 aa16.74■□□□□ 0.27
CHUK-201ENST00000370397 PPIL1Q9Y3C6 166 aa16.74■□□□□ 0.27
CHUK-201ENST00000370397 A0A1W2PQL4 384 aaPredicted RBP16.74■□□□□ 0.27
CHUK-201ENST00000370397 FAM25AB3EWG3 89 aa16.74■□□□□ 0.27
CHUK-201ENST00000370397 FAM25CB3EWG5 89 aa16.74■□□□□ 0.27
CHUK-201ENST00000370397 FAM25GB3EWG6 89 aa16.74■□□□□ 0.27
CHUK-201ENST00000370397 NPC1O15118 1278 aa16.74■□□□□ 0.27
CHUK-201ENST00000370397 LRRTM2O43300 516 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms