RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 USP30Q70CQ3 517 aa15.5■□□□□ 0.07
CHD1L-203ENST00000369259 CIR1Q86X95 450 aaPredicted RBP15.5■□□□□ 0.07
CHD1L-203ENST00000369259 AQP11Q8NBQ7 271 aa15.5■□□□□ 0.07
CHD1L-203ENST00000369259 C11orf65Q8NCR3 313 aa15.5■□□□□ 0.07
CHD1L-203ENST00000369259 OR11H4Q8NGC9 324 aa15.5■□□□□ 0.07
CHD1L-203ENST00000369259 OR52P1PQ8NH57 321 aa15.5■□□□□ 0.07
CHD1L-203ENST00000369259 ACER3Q9NUN7 267 aa15.5■□□□□ 0.07
CHD1L-203ENST00000369259 RPL36Q9Y3U8 105 aaKnown RBP15.5■□□□□ 0.07
CHD1L-203ENST00000369259 NUP214P35658 2090 aaPredicted RBP15.5■□□□□ 0.07
CHD1L-203ENST00000369259 A0A1W2PRG6 482 aa15.49■□□□□ 0.07
CHD1L-203ENST00000369259 PCP4L1A6NKN8 68 aa15.49■□□□□ 0.07
CHD1L-203ENST00000369259 J3KTA2 159 aa15.49■□□□□ 0.07
CHD1L-203ENST00000369259 COX7A2P14406 83 aa15.49■□□□□ 0.07
CHD1L-203ENST00000369259 AMD1P17707 334 aa15.49■□□□□ 0.07
CHD1L-203ENST00000369259 LIMS1P48059 325 aa15.49■□□□□ 0.07
CHD1L-203ENST00000369259 EVX1P49640 407 aa15.49■□□□□ 0.07
CHD1L-203ENST00000369259 ZXDBP98169 803 aa15.49■□□□□ 0.07
CHD1L-203ENST00000369259 RGNQ15493 299 aa15.49■□□□□ 0.07
CHD1L-203ENST00000369259 ZNF57Q68EA5 555 aaPredicted RBP15.49■□□□□ 0.07
CHD1L-203ENST00000369259 NOXRED1Q6NXP6 359 aa15.49■□□□□ 0.07
CHD1L-203ENST00000369259 ZNF655Q8N720 491 aaPredicted RBP15.49■□□□□ 0.07
CHD1L-203ENST00000369259 LILRB1Q8NHL6 650 aaPredicted RBP15.49■□□□□ 0.07
CHD1L-203ENST00000369259 ACBD6Q9BR61 282 aa15.49■□□□□ 0.07
CHD1L-203ENST00000369259 CIPCQ9C0C6 399 aa15.49■□□□□ 0.07
CHD1L-203ENST00000369259 SYNDIG1Q9H7V2 258 aa15.49■□□□□ 0.07
CHD1L-203ENST00000369259 C11orf16Q9NQ32 467 aa15.49■□□□□ 0.07
CHD1L-203ENST00000369259 THSD1Q9NS62 852 aa15.49■□□□□ 0.07
CHD1L-203ENST00000369259 ATP6V1HQ9UI12 483 aa15.49■□□□□ 0.07
CHD1L-203ENST00000369259 ZNF222Q9UK12 451 aa15.49■□□□□ 0.07
CHD1L-203ENST00000369259 PCDHB1Q9Y5F3 818 aa15.49■□□□□ 0.07
CHD1L-203ENST00000369259 TNS1Q9HBL0 1735 aaKnown RBP15.49■□□□□ 0.07
CHD1L-203ENST00000369259 PRAMEF33A0A0G2JMD5 474 aa15.49■□□□□ 0.07
CHD1L-203ENST00000369259 PRAMEF25A6NGN4 478 aa15.49■□□□□ 0.07
CHD1L-203ENST00000369259 RRN3P2A6NIE6 340 aa15.49■□□□□ 0.07
CHD1L-203ENST00000369259 GPR39O43194 453 aa15.49■□□□□ 0.07
CHD1L-203ENST00000369259 TREHO43280 583 aa15.49■□□□□ 0.07
CHD1L-203ENST00000369259 PRAMEF10O60809 474 aa15.49■□□□□ 0.07
CHD1L-203ENST00000369259 ATG13O75143 517 aa15.49■□□□□ 0.07
CHD1L-203ENST00000369259 PSIP1O75475 530 aaKnown RBP15.49■□□□□ 0.07
CHD1L-203ENST00000369259 GASTP01350 101 aa15.49■□□□□ 0.07
CHD1L-203ENST00000369259 CHRM5P08912 532 aaPredicted RBP15.49■□□□□ 0.07
CHD1L-203ENST00000369259 OR1E1P30953 314 aa15.49■□□□□ 0.07
CHD1L-203ENST00000369259 UBE3AQ05086 875 aa15.49■□□□□ 0.07
CHD1L-203ENST00000369259 BTN1A1Q13410 526 aa15.49■□□□□ 0.07
CHD1L-203ENST00000369259 SNAPC1Q16533 368 aa15.49■□□□□ 0.07
CHD1L-203ENST00000369259 TMEM201Q5SNT2 666 aa15.49■□□□□ 0.07
CHD1L-203ENST00000369259 PTRHD1Q6GMV3 140 aaKnown RBP15.49■□□□□ 0.07
CHD1L-203ENST00000369259 TRILQ7L0X0 811 aa15.49■□□□□ 0.07
CHD1L-203ENST00000369259 SYT12Q8IV01 421 aa15.49■□□□□ 0.07
CHD1L-203ENST00000369259 OR8J2Q8NGG1 315 aa15.49■□□□□ 0.07
CHD1L-203ENST00000369259 CSGALNACT1Q8TDX6 532 aa15.49■□□□□ 0.07
CHD1L-203ENST00000369259 KLHL15Q96M94 604 aa15.49■□□□□ 0.07
CHD1L-203ENST00000369259 PIP5K1AQ99755 562 aa15.49■□□□□ 0.07
CHD1L-203ENST00000369259 MGME1Q9BQP7 344 aa15.49■□□□□ 0.07
CHD1L-203ENST00000369259 WACQ9BTA9 647 aa15.49■□□□□ 0.07
CHD1L-203ENST00000369259 ZMAT5Q9UDW3 170 aaKnown RBP15.49■□□□□ 0.07
CHD1L-203ENST00000369259 CORO2BQ9UQ03 480 aa15.49■□□□□ 0.07
CHD1L-203ENST00000369259 YY2O15391 372 aa15.48■□□□□ 0.07
CHD1L-203ENST00000369259 AKAP8O43823 692 aaKnown RBP15.48■□□□□ 0.07
CHD1L-203ENST00000369259 ACPPP15309 386 aa15.48■□□□□ 0.07
CHD1L-203ENST00000369259 STOMP27105 288 aa15.48■□□□□ 0.07
CHD1L-203ENST00000369259 BMP8BP34820 402 aa15.48■□□□□ 0.07
CHD1L-203ENST00000369259 MAP2K6P52564 334 aa15.48■□□□□ 0.07
CHD1L-203ENST00000369259 HMGA2P52926 109 aa15.48■□□□□ 0.07
CHD1L-203ENST00000369259 CAV3P56539 151 aa15.48■□□□□ 0.07
CHD1L-203ENST00000369259 YBEYP58557 167 aaPredicted RBP15.48■□□□□ 0.07
CHD1L-203ENST00000369259 ZNF91Q05481 1191 aa15.48■□□□□ 0.07
CHD1L-203ENST00000369259 TMIGD1Q6UXZ0 262 aa15.48■□□□□ 0.07
CHD1L-203ENST00000369259 BMP8AQ7Z5Y6 402 aa15.48■□□□□ 0.07
CHD1L-203ENST00000369259 MICALL2Q8IY33 904 aa15.48■□□□□ 0.07
CHD1L-203ENST00000369259 DNAJC5GQ8N7S2 189 aa15.48■□□□□ 0.07
CHD1L-203ENST00000369259 PLA2G15Q8NCC3 412 aa15.48■□□□□ 0.07
CHD1L-203ENST00000369259 FBXW5Q969U6 566 aa15.48■□□□□ 0.07
CHD1L-203ENST00000369259 EBPLQ9BY08 206 aa15.48■□□□□ 0.07
CHD1L-203ENST00000369259 PDFQ9HBH1 243 aa15.48■□□□□ 0.07
CHD1L-203ENST00000369259 TXNRD2Q9NNW7 524 aa15.48■□□□□ 0.07
CHD1L-203ENST00000369259 ATPIF1Q9UII2 106 aa15.48■□□□□ 0.07
CHD1L-203ENST00000369259 ACTL7AQ9Y615 435 aa15.48■□□□□ 0.07
CHD1L-203ENST00000369259 EP400Q96L91 3159 aa15.48■□□□□ 0.07
CHD1L-203ENST00000369259 GTPBP1O00178 669 aaKnown RBP15.48■□□□□ 0.07
CHD1L-203ENST00000369259 LZTS3O60299 673 aaPredicted RBP15.48■□□□□ 0.07
CHD1L-203ENST00000369259 PRMT3O60678 531 aa15.48■□□□□ 0.07
CHD1L-203ENST00000369259 GADD45GO95257 159 aa15.48■□□□□ 0.07
CHD1L-203ENST00000369259 ANXA3P12429 323 aa15.48■□□□□ 0.07
CHD1L-203ENST00000369259 PPIBP23284 216 aaKnown RBP15.48■□□□□ 0.07
CHD1L-203ENST00000369259 DGKAP23743 735 aa15.48■□□□□ 0.07
CHD1L-203ENST00000369259 SLC6A1P30531 599 aa15.48■□□□□ 0.07
CHD1L-203ENST00000369259 DGKEP52429 567 aa15.48■□□□□ 0.07
CHD1L-203ENST00000369259 EPHA5P54756 1037 aa15.48■□□□□ 0.07
CHD1L-203ENST00000369259 CYP4F8P98187 520 aa15.48■□□□□ 0.07
CHD1L-203ENST00000369259 HSF2Q03933 536 aa15.48■□□□□ 0.07
CHD1L-203ENST00000369259 PLK5Q496M5 336 aa15.48■□□□□ 0.07
CHD1L-203ENST00000369259 TIGD5Q53EQ6 642 aa15.48■□□□□ 0.07
CHD1L-203ENST00000369259 SHEQ5VZ18 495 aa15.48■□□□□ 0.07
CHD1L-203ENST00000369259 LIPIQ6XZB0 460 aa15.48■□□□□ 0.07
CHD1L-203ENST00000369259 ADGRD2Q7Z7M1 963 aa15.48■□□□□ 0.07
CHD1L-203ENST00000369259 LRRTM3Q86VH5 581 aa15.48■□□□□ 0.07
CHD1L-203ENST00000369259 LAPTM4BQ86VI4 370 aa15.48■□□□□ 0.07
CHD1L-203ENST00000369259 NAGSQ8N159 534 aa15.48■□□□□ 0.07
CHD1L-203ENST00000369259 SYT14Q8NB59 555 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms