RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 GRIK2Q13002 908 aa8.38□□□□□ -1.07
TPM3-213ENST00000368545 MAD2L1Q13257 205 aaPredicted RBP8.38□□□□□ -1.07
TPM3-213ENST00000368545 PTK2BQ14289 1009 aa8.38□□□□□ -1.07
TPM3-213ENST00000368545 FASTKQ14296 549 aaKnown RBP8.38□□□□□ -1.07
TPM3-213ENST00000368545 NFATC4Q14934 902 aa8.38□□□□□ -1.07
TPM3-213ENST00000368545 ARHGAP19Q14CB8 494 aa8.38□□□□□ -1.07
TPM3-213ENST00000368545 RTP5Q14D33 572 aa8.38□□□□□ -1.07
TPM3-213ENST00000368545 ZXDCQ2QGD7 858 aaPredicted RBP8.38□□□□□ -1.07
TPM3-213ENST00000368545 KIF19Q2TAC6 998 aa8.38□□□□□ -1.07
TPM3-213ENST00000368545 PYCR3Q53H96 274 aa8.38□□□□□ -1.07
TPM3-213ENST00000368545 DCP2Q8IU60 420 aaKnown RBP8.38□□□□□ -1.07
TPM3-213ENST00000368545 TBC1D21Q8IYX1 336 aa8.38□□□□□ -1.07
TPM3-213ENST00000368545 RAB42Q8N4Z0 105 aa8.38□□□□□ -1.07
TPM3-213ENST00000368545 POU5F2Q8N7G0 328 aa8.38□□□□□ -1.07
TPM3-213ENST00000368545 OR5K2Q8NHB8 316 aa8.38□□□□□ -1.07
TPM3-213ENST00000368545 TFGQ92734 400 aaPredicted RBP8.38□□□□□ -1.07
TPM3-213ENST00000368545 PYCR2Q96C36 320 aa8.38□□□□□ -1.07
TPM3-213ENST00000368545 MARK4Q96L34 752 aa8.38□□□□□ -1.07
TPM3-213ENST00000368545 SLC40A1Q9NP59 571 aa8.38□□□□□ -1.07
TPM3-213ENST00000368545 CD93Q9NPY3 652 aa8.38□□□□□ -1.07
TPM3-213ENST00000368545 SPATA7Q9P0W8 599 aa8.38□□□□□ -1.07
TPM3-213ENST00000368545 KLQ9UEF7 1012 aa8.38□□□□□ -1.07
TPM3-213ENST00000368545 SLC23A2Q9UGH3 650 aa8.38□□□□□ -1.07
TPM3-213ENST00000368545 SUFUQ9UMX1 484 aa8.38□□□□□ -1.07
TPM3-213ENST00000368545 PTGDR2Q9Y5Y4 395 aa8.38□□□□□ -1.07
TPM3-213ENST00000368545 HS3ST3A1Q9Y663 406 aa8.38□□□□□ -1.07
TPM3-213ENST00000368545 KCNE2Q9Y6J6 123 aa8.38□□□□□ -1.07
TPM3-213ENST00000368545 PLXND1Q9Y4D7 1925 aa8.38□□□□□ -1.07
TPM3-213ENST00000368545 SPTBN2O15020 2390 aa8.38□□□□□ -1.07
TPM3-213ENST00000368545 MAST4O15021 2626 aa8.38□□□□□ -1.07
TPM3-213ENST00000368545 BBIP1A8MTZ0 92 aa8.38□□□□□ -1.07
TPM3-213ENST00000368545 LSM1O15116 133 aaKnown RBP8.38□□□□□ -1.07
TPM3-213ENST00000368545 GSC2O15499 205 aa8.38□□□□□ -1.07
TPM3-213ENST00000368545 CER1O95813 267 aa8.38□□□□□ -1.07
TPM3-213ENST00000368545 ALDOCP09972 364 aaKnown RBP8.38□□□□□ -1.07
TPM3-213ENST00000368545 ACP5P13686 325 aa8.38□□□□□ -1.07
TPM3-213ENST00000368545 JUPP14923 745 aa8.38□□□□□ -1.07
TPM3-213ENST00000368545 GNAZP19086 355 aa8.38□□□□□ -1.07
TPM3-213ENST00000368545 CD6P30203 668 aa8.38□□□□□ -1.07
TPM3-213ENST00000368545 HNF4AP41235 474 aa8.38□□□□□ -1.07
TPM3-213ENST00000368545 TBPL1P62380 186 aa8.38□□□□□ -1.07
TPM3-213ENST00000368545 STX5Q13190 355 aa8.38□□□□□ -1.07
TPM3-213ENST00000368545 NAE1Q13564 534 aa8.38□□□□□ -1.07
TPM3-213ENST00000368545 ABRAXAS2Q15018 415 aa8.38□□□□□ -1.07
TPM3-213ENST00000368545 CCSMST1Q4G0I0 132 aa8.38□□□□□ -1.07
TPM3-213ENST00000368545 KIAA0895LQ68EN5 471 aa8.38□□□□□ -1.07
TPM3-213ENST00000368545 GRHL2Q6ISB3 625 aa8.38□□□□□ -1.07
TPM3-213ENST00000368545 ANO7Q6IWH7 933 aa8.38□□□□□ -1.07
TPM3-213ENST00000368545 SNX32Q86XE0 403 aa8.38□□□□□ -1.07
TPM3-213ENST00000368545 C10orf67Q8IYJ2 551 aa8.38□□□□□ -1.07
TPM3-213ENST00000368545 MINDY1Q8N5J2 469 aa8.38□□□□□ -1.07
TPM3-213ENST00000368545 ZNF480Q8WV37 535 aa8.38□□□□□ -1.07
TPM3-213ENST00000368545 WDR92Q96MX6 357 aa8.38□□□□□ -1.07
TPM3-213ENST00000368545 OR2M4Q96R27 311 aa8.38□□□□□ -1.07
TPM3-213ENST00000368545 SLC25A23Q9BV35 468 aa8.38□□□□□ -1.07
TPM3-213ENST00000368545 CADM1Q9BY67 442 aaKnown RBP8.38□□□□□ -1.07
TPM3-213ENST00000368545 SDR39U1Q9NRG7 319 aaPredicted RBP8.38□□□□□ -1.07
TPM3-213ENST00000368545 FTSJ1Q9UET6 329 aa8.38□□□□□ -1.07
TPM3-213ENST00000368545 ZNF490Q9ULM2 529 aaPredicted RBP8.38□□□□□ -1.07
TPM3-213ENST00000368545 RNF11Q9Y3C5 154 aa8.38□□□□□ -1.07
TPM3-213ENST00000368545 KCNE1BA0A087WTH5 132 aa8.37□□□□□ -1.07
TPM3-213ENST00000368545 PRAMEF26H0Y7S4 382 aa8.37□□□□□ -1.07
TPM3-213ENST00000368545 MANBAO00462 879 aa8.37□□□□□ -1.07
TPM3-213ENST00000368545 PEX11AO75192 247 aa8.37□□□□□ -1.07
TPM3-213ENST00000368545 RASSF9O75901 435 aa8.37□□□□□ -1.07
TPM3-213ENST00000368545 ERGP11308 486 aa8.37□□□□□ -1.07
TPM3-213ENST00000368545 CKMT1AP12532 417 aa8.37□□□□□ -1.07
TPM3-213ENST00000368545 IDSP22304 550 aa8.37□□□□□ -1.07
TPM3-213ENST00000368545 RABIFP47224 123 aa8.37□□□□□ -1.07
TPM3-213ENST00000368545 HTR6P50406 440 aa8.37□□□□□ -1.07
TPM3-213ENST00000368545 CLCNKAP51800 687 aa8.37□□□□□ -1.07
TPM3-213ENST00000368545 ELF3P78545 371 aaPredicted RBP8.37□□□□□ -1.07
TPM3-213ENST00000368545 IRF8Q02556 426 aa8.37□□□□□ -1.07
TPM3-213ENST00000368545 EMX2Q04743 252 aa8.37□□□□□ -1.07
TPM3-213ENST00000368545 CHIT1Q13231 466 aa8.37□□□□□ -1.07
TPM3-213ENST00000368545 CUL3Q13618 768 aa8.37□□□□□ -1.07
TPM3-213ENST00000368545 LRP8Q14114 963 aa8.37□□□□□ -1.07
TPM3-213ENST00000368545 E2F2Q14209 437 aa8.37□□□□□ -1.07
TPM3-213ENST00000368545 GRB7Q14451 532 aa8.37□□□□□ -1.07
TPM3-213ENST00000368545 RPS6KA2Q15349 733 aa8.37□□□□□ -1.07
TPM3-213ENST00000368545 IMPG1Q17R60 797 aa8.37□□□□□ -1.07
TPM3-213ENST00000368545 PDCD4Q53EL6 469 aaKnown RBP8.37□□□□□ -1.07
TPM3-213ENST00000368545 C3orf38Q5JPI3 329 aa8.37□□□□□ -1.07
TPM3-213ENST00000368545 TCHHL1Q5QJ38 904 aaPredicted RBP8.37□□□□□ -1.07
TPM3-213ENST00000368545 C6orf136Q5SQH8 315 aa8.37□□□□□ -1.07
TPM3-213ENST00000368545 CAPRIN2Q6IMN6 1127 aaKnown RBP8.37□□□□□ -1.07
TPM3-213ENST00000368545 CYB5D1Q6P9G0 228 aa8.37□□□□□ -1.07
TPM3-213ENST00000368545 C16orf89Q6UX73 402 aa8.37□□□□□ -1.07
TPM3-213ENST00000368545 GCNT7Q6ZNI0 430 aa8.37□□□□□ -1.07
TPM3-213ENST00000368545 Q6ZSR9 355 aa8.37□□□□□ -1.07
TPM3-213ENST00000368545 FNDC5Q8NAU1 212 aa8.37□□□□□ -1.07
TPM3-213ENST00000368545 NUP43Q8NFH3 380 aa8.37□□□□□ -1.07
TPM3-213ENST00000368545 OR2T11Q8NH01 316 aa8.37□□□□□ -1.07
TPM3-213ENST00000368545 SETD7Q8WTS6 366 aaKnown RBP8.37□□□□□ -1.07
TPM3-213ENST00000368545 MUL1Q969V5 352 aa8.37□□□□□ -1.07
TPM3-213ENST00000368545 MYOCQ99972 504 aa8.37□□□□□ -1.07
TPM3-213ENST00000368545 SGPP1Q9BX95 441 aa8.37□□□□□ -1.07
TPM3-213ENST00000368545 RAB11FIP5Q9BXF6 653 aa8.37□□□□□ -1.07
TPM3-213ENST00000368545 OSGEPL1Q9H4B0 414 aa8.37□□□□□ -1.07
TPM3-213ENST00000368545 EHD1Q9H4M9 534 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms