RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 OR51B5Q9H339 312 aa17.74■□□□□ 0.43
CKS1B-203ENST00000368439 ACTR8Q9H981 624 aa17.74■□□□□ 0.43
CKS1B-203ENST00000368439 LYRM4Q9HD34 91 aa17.74■□□□□ 0.43
CKS1B-203ENST00000368439 DMRT3Q9NQL9 472 aa17.74■□□□□ 0.43
CKS1B-203ENST00000368439 PRTFDC1Q9NRG1 225 aa17.74■□□□□ 0.43
CKS1B-203ENST00000368439 FETUBQ9UGM5 382 aa17.74■□□□□ 0.43
CKS1B-203ENST00000368439 ADGRE2Q9UHX3 823 aa17.74■□□□□ 0.43
CKS1B-203ENST00000368439 PCTPQ9UKL6 214 aa17.74■□□□□ 0.43
CKS1B-203ENST00000368439 TMCO1Q9UM00 188 aa17.74■□□□□ 0.43
CKS1B-203ENST00000368439 RNF11Q9Y3C5 154 aa17.74■□□□□ 0.43
CKS1B-203ENST00000368439 TRAV17A0A0B4J275 112 aa17.73■□□□□ 0.43
CKS1B-203ENST00000368439 OR5H15A6NDH6 313 aa17.73■□□□□ 0.43
CKS1B-203ENST00000368439 HIST1H1TP22492 207 aaPredicted RBP17.73■□□□□ 0.43
CKS1B-203ENST00000368439 PIK3CGP48736 1102 aa17.73■□□□□ 0.43
CKS1B-203ENST00000368439 LGSNQ5TDP6 509 aa17.73■□□□□ 0.43
CKS1B-203ENST00000368439 CHSY3Q70JA7 882 aa17.73■□□□□ 0.43
CKS1B-203ENST00000368439 CYP4X1Q8N118 509 aa17.73■□□□□ 0.43
CKS1B-203ENST00000368439 BEST3Q8N1M1 668 aa17.73■□□□□ 0.43
CKS1B-203ENST00000368439 FAM26EQ8N5C1 309 aa17.73■□□□□ 0.43
CKS1B-203ENST00000368439 OR52B6Q8NGF0 335 aa17.73■□□□□ 0.43
CKS1B-203ENST00000368439 GRHL3Q8TE85 626 aa17.73■□□□□ 0.43
CKS1B-203ENST00000368439 MTBPQ96DY7 904 aa17.73■□□□□ 0.43
CKS1B-203ENST00000368439 NSUN5Q96P11 429 aaKnown RBP17.73■□□□□ 0.43
CKS1B-203ENST00000368439 MAPKAP1Q9BPZ7 522 aa17.73■□□□□ 0.43
CKS1B-203ENST00000368439 ZNF717Q9BY31 904 aaPredicted RBP17.73■□□□□ 0.43
CKS1B-203ENST00000368439 MRPL46Q9H2W6 279 aaKnown RBP17.73■□□□□ 0.43
CKS1B-203ENST00000368439 NOL11Q9H8H0 719 aaKnown RBP17.73■□□□□ 0.43
CKS1B-203ENST00000368439 COPS7BQ9H9Q2 264 aaPredicted RBP17.73■□□□□ 0.43
CKS1B-203ENST00000368439 TEKT2Q9UIF3 430 aa17.73■□□□□ 0.43
CKS1B-203ENST00000368439 PPIEQ9UNP9 301 aaKnown RBP17.73■□□□□ 0.43
CKS1B-203ENST00000368439 PCDHGA11Q9Y5H2 935 aa17.73■□□□□ 0.43
CKS1B-203ENST00000368439 HECTD1Q9ULT8 2610 aa17.73■□□□□ 0.43
CKS1B-203ENST00000368439 A8MUA0 341 aa17.72■□□□□ 0.43
CKS1B-203ENST00000368439 SAP18O00422 153 aaKnown RBP17.72■□□□□ 0.43
CKS1B-203ENST00000368439 UQCRHP07919 91 aa17.72■□□□□ 0.43
CKS1B-203ENST00000368439 RPS17P08708 135 aaKnown RBP17.72■□□□□ 0.43
CKS1B-203ENST00000368439 PPP2R1BP30154 601 aa17.72■□□□□ 0.43
CKS1B-203ENST00000368439 GPR143P51810 404 aa17.72■□□□□ 0.43
CKS1B-203ENST00000368439 TRAF3Q13114 568 aa17.72■□□□□ 0.43
CKS1B-203ENST00000368439 DDX39BQ13838 428 aaKnown RBP17.72■□□□□ 0.43
CKS1B-203ENST00000368439 TERF2Q15554 542 aa17.72■□□□□ 0.43
CKS1B-203ENST00000368439 CPSF6Q16630 551 aaKnown RBP eCLIP17.72■□□□□ 0.43
CKS1B-203ENST00000368439 MEP1AQ16819 746 aa17.72■□□□□ 0.43
CKS1B-203ENST00000368439 OR4C11Q6IEV9 310 aa17.72■□□□□ 0.43
CKS1B-203ENST00000368439 MYLK4Q86YV6 388 aaPredicted RBP17.72■□□□□ 0.43
CKS1B-203ENST00000368439 LGI4Q8N135 537 aa17.72■□□□□ 0.43
CKS1B-203ENST00000368439 APCDD1LQ8NCL9 501 aa17.72■□□□□ 0.43
CKS1B-203ENST00000368439 ARMC2Q8NEN0 867 aa17.72■□□□□ 0.43
CKS1B-203ENST00000368439 CDK15Q96Q40 435 aa17.72■□□□□ 0.43
CKS1B-203ENST00000368439 TAAR6Q96RI8 345 aa17.72■□□□□ 0.43
CKS1B-203ENST00000368439 MTERF1Q99551 399 aaKnown RBP17.72■□□□□ 0.43
CKS1B-203ENST00000368439 NTMT1Q9BV86 223 aa17.72■□□□□ 0.43
CKS1B-203ENST00000368439 SORBS1Q9BX66 1292 aaKnown RBP17.72■□□□□ 0.43
CKS1B-203ENST00000368439 C1QTNF3Q9BXJ4 246 aa17.72■□□□□ 0.43
CKS1B-203ENST00000368439 PSD3Q9NYI0 1048 aa17.72■□□□□ 0.43
CKS1B-203ENST00000368439 TMEM216Q9P0N5 145 aa17.72■□□□□ 0.43
CKS1B-203ENST00000368439 SVILO95425 2214 aa17.72■□□□□ 0.43
CKS1B-203ENST00000368439 ZGRF1Q86YA3 2104 aa17.72■□□□□ 0.43
CKS1B-203ENST00000368439 POLEQ07864 2286 aa17.72■□□□□ 0.43
CKS1B-203ENST00000368439 A0A1B0GTL3 188 aa17.71■□□□□ 0.43
CKS1B-203ENST00000368439 A8MT66 165 aa17.71■□□□□ 0.43
CKS1B-203ENST00000368439 CLDN4O14493 209 aa17.71■□□□□ 0.43
CKS1B-203ENST00000368439 PLPP1O14494 284 aa17.71■□□□□ 0.43
CKS1B-203ENST00000368439 CTNSO60931 367 aa17.71■□□□□ 0.43
CKS1B-203ENST00000368439 SMIM24O75264 130 aa17.71■□□□□ 0.43
CKS1B-203ENST00000368439 CLDN9O95484 217 aa17.71■□□□□ 0.43
CKS1B-203ENST00000368439 ETHE1O95571 254 aa17.71■□□□□ 0.43
CKS1B-203ENST00000368439 TNFRSF8P28908 595 aa17.71■□□□□ 0.43
CKS1B-203ENST00000368439 ARFIP1P53367 373 aa17.71■□□□□ 0.43
CKS1B-203ENST00000368439 RPS13P62277 151 aaKnown RBP17.71■□□□□ 0.43
CKS1B-203ENST00000368439 TUBA3CQ13748 450 aa17.71■□□□□ 0.43
CKS1B-203ENST00000368439 ZRSR2Q15696 482 aaKnown RBP17.71■□□□□ 0.43
CKS1B-203ENST00000368439 EIF2S3LQ2VIR3 472 aaKnown RBP17.71■□□□□ 0.43
CKS1B-203ENST00000368439 AP5B1Q2VPB7 878 aa17.71■□□□□ 0.43
CKS1B-203ENST00000368439 TEX35Q5T0J7 233 aa17.71■□□□□ 0.43
CKS1B-203ENST00000368439 ZNF324BQ6AW86 544 aaPredicted RBP17.71■□□□□ 0.43
CKS1B-203ENST00000368439 TUBA3EQ6PEY2 450 aa17.71■□□□□ 0.43
CKS1B-203ENST00000368439 ARMC10Q8N2F6 343 aa17.71■□□□□ 0.43
CKS1B-203ENST00000368439 MDS2Q8NDY4 140 aa17.71■□□□□ 0.43
CKS1B-203ENST00000368439 FAR1Q8WVX9 515 aa17.71■□□□□ 0.43
CKS1B-203ENST00000368439 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.71■□□□□ 0.43
CKS1B-203ENST00000368439 AGPAT4Q9NRZ5 378 aa17.71■□□□□ 0.43
CKS1B-203ENST00000368439 ZNF223Q9UK11 482 aaPredicted RBP17.71■□□□□ 0.43
CKS1B-203ENST00000368439 MRPS33Q9Y291 106 aaKnown RBP17.71■□□□□ 0.43
CKS1B-203ENST00000368439 PRAMEF2O60811 474 aa17.7■□□□□ 0.42
CKS1B-203ENST00000368439 CD96P40200 585 aa17.7■□□□□ 0.42
CKS1B-203ENST00000368439 SSR2P43308 183 aa17.7■□□□□ 0.42
CKS1B-203ENST00000368439 ST13P50502 369 aaKnown RBP17.7■□□□□ 0.42
CKS1B-203ENST00000368439 NEK2P51955 445 aa17.7■□□□□ 0.42
CKS1B-203ENST00000368439 SLC13A2Q13183 592 aa17.7■□□□□ 0.42
CKS1B-203ENST00000368439 INAQ16352 499 aa17.7■□□□□ 0.42
CKS1B-203ENST00000368439 RPS27LQ71UM5 84 aaKnown RBP17.7■□□□□ 0.42
CKS1B-203ENST00000368439 CLNKQ7Z7G1 428 aa17.7■□□□□ 0.42
CKS1B-203ENST00000368439 RPS19BP1Q86WX3 136 aaKnown RBP17.7■□□□□ 0.42
CKS1B-203ENST00000368439 SLC5A8Q8N695 610 aa17.7■□□□□ 0.42
CKS1B-203ENST00000368439 B3GNT7Q8NFL0 401 aa17.7■□□□□ 0.42
CKS1B-203ENST00000368439 ZNF483Q8TF39 744 aaPredicted RBP17.7■□□□□ 0.42
CKS1B-203ENST00000368439 RGMAQ96B86 450 aa17.7■□□□□ 0.42
CKS1B-203ENST00000368439 REPS1Q96D71 796 aa17.7■□□□□ 0.42
CKS1B-203ENST00000368439 SIGLEC12Q96PQ1 595 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms