RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 TNFRSF10BO14763 440 aa11.22□□□□□ -0.61
COPA-202ENST00000368069 MLLT10P55197 1068 aa11.22□□□□□ -0.61
COPA-202ENST00000368069 PHC1P78364 1004 aa11.22□□□□□ -0.61
COPA-202ENST00000368069 MLLT1Q03111 559 aaPredicted RBP11.22□□□□□ -0.61
COPA-202ENST00000368069 TMEM207Q6UWW9 146 aa11.22□□□□□ -0.61
COPA-202ENST00000368069 COMMD6Q7Z4G1 85 aa11.22□□□□□ -0.61
COPA-202ENST00000368069 TMCO2Q7Z6W1 182 aaPredicted RBP11.22□□□□□ -0.61
COPA-202ENST00000368069 NAGSQ8N159 534 aa11.22□□□□□ -0.61
COPA-202ENST00000368069 ZNF248Q8NDW4 579 aa11.22□□□□□ -0.61
COPA-202ENST00000368069 OR8H1Q8NGG4 311 aa11.22□□□□□ -0.61
COPA-202ENST00000368069 ELOVL2Q9NXB9 296 aa11.22□□□□□ -0.61
COPA-202ENST00000368069 HEMK1Q9Y5R4 338 aaPredicted RBP11.22□□□□□ -0.61
COPA-202ENST00000368069 SCN9AQ15858 1988 aa11.22□□□□□ -0.61
COPA-202ENST00000368069 CLDN4O14493 209 aa11.21□□□□□ -0.61
COPA-202ENST00000368069 ADAM12O43184 909 aa11.21□□□□□ -0.61
COPA-202ENST00000368069 KIAA0513O60268 411 aa11.21□□□□□ -0.61
COPA-202ENST00000368069 CTSOP43234 321 aaPredicted RBP11.21□□□□□ -0.61
COPA-202ENST00000368069 FCHO2Q0JRZ9 810 aa11.21□□□□□ -0.61
COPA-202ENST00000368069 HNRNPA0Q13151 305 aaKnown RBP11.21□□□□□ -0.61
COPA-202ENST00000368069 SLC13A2Q13183 592 aa11.21□□□□□ -0.61
COPA-202ENST00000368069 NXPE4Q6UWF7 544 aa11.21□□□□□ -0.61
COPA-202ENST00000368069 SLC36A4Q6YBV0 504 aa11.21□□□□□ -0.61
COPA-202ENST00000368069 CASD1Q96PB1 797 aa11.21□□□□□ -0.61
COPA-202ENST00000368069 RNF38Q9H0F5 515 aa11.21□□□□□ -0.61
COPA-202ENST00000368069 OLAHQ9NV23 265 aa11.21□□□□□ -0.61
COPA-202ENST00000368069 C14orf119Q9NWQ9 140 aa11.21□□□□□ -0.61
COPA-202ENST00000368069 COL24A1Q17RW2 1714 aa11.21□□□□□ -0.61
COPA-202ENST00000368069 FAM172BPA6NC97 362 aa11.21□□□□□ -0.61
COPA-202ENST00000368069 HLA-DPB1P04440 258 aa11.21□□□□□ -0.61
COPA-202ENST00000368069 RHCEP18577 417 aa11.21□□□□□ -0.61
COPA-202ENST00000368069 CD83Q01151 205 aa11.21□□□□□ -0.61
COPA-202ENST00000368069 GSTM4Q03013 218 aa11.21□□□□□ -0.61
COPA-202ENST00000368069 RGNQ15493 299 aa11.21□□□□□ -0.61
COPA-202ENST00000368069 LIPKQ5VXJ0 399 aa11.21□□□□□ -0.61
COPA-202ENST00000368069 GRHL2Q6ISB3 625 aa11.21□□□□□ -0.61
COPA-202ENST00000368069 ANKRD13BQ86YJ7 626 aa11.21□□□□□ -0.61
COPA-202ENST00000368069 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.21□□□□□ -0.61
COPA-202ENST00000368069 OR6K6Q8NGW6 343 aa11.21□□□□□ -0.61
COPA-202ENST00000368069 NDNFQ8TB73 568 aa11.21□□□□□ -0.61
COPA-202ENST00000368069 GAB3Q8WWW8 586 aa11.21□□□□□ -0.61
COPA-202ENST00000368069 SLC22A18Q96BI1 424 aa11.21□□□□□ -0.61
COPA-202ENST00000368069 ZNF689Q96CS4 500 aaPredicted RBP11.21□□□□□ -0.61
COPA-202ENST00000368069 LRIG1Q96JA1 1093 aa11.21□□□□□ -0.61
COPA-202ENST00000368069 NAA50Q9GZZ1 169 aaKnown RBP11.21□□□□□ -0.61
COPA-202ENST00000368069 TLR9Q9NR96 1032 aa11.21□□□□□ -0.61
COPA-202ENST00000368069 AASSQ9UDR5 926 aa11.21□□□□□ -0.61
COPA-202ENST00000368069 CD300AQ9UGN4 299 aa11.21□□□□□ -0.61
COPA-202ENST00000368069 HOXD8P13378 290 aaPredicted RBP11.21□□□□□ -0.62
COPA-202ENST00000368069 BMXP51813 675 aa11.21□□□□□ -0.62
COPA-202ENST00000368069 UAP1L1Q3KQV9 507 aa11.21□□□□□ -0.62
COPA-202ENST00000368069 CDKL4Q5MAI5 379 aa11.21□□□□□ -0.62
COPA-202ENST00000368069 PRPF38BQ5VTL8 546 aaKnown RBP11.21□□□□□ -0.62
COPA-202ENST00000368069 LIN54Q6MZP7 749 aa11.21□□□□□ -0.62
COPA-202ENST00000368069 CHDHQ8NE62 594 aaPredicted RBP11.21□□□□□ -0.62
COPA-202ENST00000368069 OR4E2Q8NGC2 313 aa11.21□□□□□ -0.62
COPA-202ENST00000368069 OR52N2Q8NGI0 321 aa11.21□□□□□ -0.62
COPA-202ENST00000368069 OTUB2Q96DC9 234 aa11.21□□□□□ -0.62
COPA-202ENST00000368069 CLMPQ9H6B4 373 aa11.21□□□□□ -0.62
COPA-202ENST00000368069 INTS6Q9UL03 887 aaKnown RBP11.21□□□□□ -0.62
COPA-202ENST00000368069 AGR2O95994 175 aa11.21□□□□□ -0.62
COPA-202ENST00000368069 CCR7P32248 378 aa11.21□□□□□ -0.62
COPA-202ENST00000368069 SHMT2P34897 504 aa11.21□□□□□ -0.62
COPA-202ENST00000368069 FAUP35544 74 aaKnown RBP11.21□□□□□ -0.62
COPA-202ENST00000368069 CCDC157Q569K6 752 aa11.21□□□□□ -0.62
COPA-202ENST00000368069 SNAP47Q5SQN1 464 aa11.21□□□□□ -0.62
COPA-202ENST00000368069 METTL2BQ6P1Q9 378 aaKnown RBP11.21□□□□□ -0.62
COPA-202ENST00000368069 C6orf120Q7Z4R8 191 aa11.21□□□□□ -0.62
COPA-202ENST00000368069 SPRED1Q7Z699 444 aa11.21□□□□□ -0.62
COPA-202ENST00000368069 SPNS2Q8IVW8 549 aa11.21□□□□□ -0.62
COPA-202ENST00000368069 CCDC116Q8IYX3 515 aa11.21□□□□□ -0.62
COPA-202ENST00000368069 SLC22A15Q8IZD6 547 aa11.21□□□□□ -0.62
COPA-202ENST00000368069 METTL25Q8N6Q8 603 aa11.21□□□□□ -0.62
COPA-202ENST00000368069 EGLN2Q96KS0 407 aa11.21□□□□□ -0.62
COPA-202ENST00000368069 PDCD10Q9BUL8 212 aa11.21□□□□□ -0.62
COPA-202ENST00000368069 DSN1Q9H410 356 aa11.21□□□□□ -0.62
COPA-202ENST00000368069 COMMD9Q9P000 198 aa11.21□□□□□ -0.62
COPA-202ENST00000368069 LHX3Q9UBR4 397 aa11.21□□□□□ -0.62
COPA-202ENST00000368069 ENPP5Q9UJA9 477 aa11.21□□□□□ -0.62
COPA-202ENST00000368069 XKRYO14609 159 aa11.2□□□□□ -0.62
COPA-202ENST00000368069 FSHRP23945 695 aa11.2□□□□□ -0.62
COPA-202ENST00000368069 GADD45AP24522 165 aa11.2□□□□□ -0.62
COPA-202ENST00000368069 ACVR2AP27037 513 aa11.2□□□□□ -0.62
COPA-202ENST00000368069 TRAM2Q15035 370 aa11.2□□□□□ -0.62
COPA-202ENST00000368069 ZNF181Q2M3W8 571 aa11.2□□□□□ -0.62
COPA-202ENST00000368069 ANKDD1AQ495B1 522 aa11.2□□□□□ -0.62
COPA-202ENST00000368069 FAM180BQ6P0A1 224 aa11.2□□□□□ -0.62
COPA-202ENST00000368069 ERN2Q76MJ5 926 aaKnown RBP11.2□□□□□ -0.62
COPA-202ENST00000368069 OR7G3Q8NG95 312 aa11.2□□□□□ -0.62
COPA-202ENST00000368069 C16orf78Q8WTQ4 265 aa11.2□□□□□ -0.62
COPA-202ENST00000368069 MRTO4Q9UKD2 239 aaKnown RBP11.2□□□□□ -0.62
COPA-202ENST00000368069 WDR37Q9Y2I8 494 aa11.2□□□□□ -0.62
COPA-202ENST00000368069 ADAMTSL1Q8N6G6 1762 aa11.2□□□□□ -0.62
COPA-202ENST00000368069 TGM5O43548 720 aa11.2□□□□□ -0.62
COPA-202ENST00000368069 CRHBPP24387 322 aa11.2□□□□□ -0.62
COPA-202ENST00000368069 ACSL1P33121 698 aa11.2□□□□□ -0.62
COPA-202ENST00000368069 CLK3P49761 638 aaKnown RBP11.2□□□□□ -0.62
COPA-202ENST00000368069 PGDP52209 483 aa11.2□□□□□ -0.62
COPA-202ENST00000368069 MANEALQ5VSG8 457 aa11.2□□□□□ -0.62
COPA-202ENST00000368069 HMBOX1Q6NT76 420 aa11.2□□□□□ -0.62
COPA-202ENST00000368069 ADGRD2Q7Z7M1 963 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms