RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 SLC6A19Q695T7 634 aa9.25□□□□□ -0.93
CD48-202ENST00000368046 H3F3CQ6NXT2 135 aa9.25□□□□□ -0.93
CD48-202ENST00000368046 PAPD4Q6PIY7 484 aaKnown RBP9.25□□□□□ -0.93
CD48-202ENST00000368046 LINC00696Q6ZRV3 163 aa9.25□□□□□ -0.93
CD48-202ENST00000368046 SLC22A9Q8IVM8 553 aa9.25□□□□□ -0.93
CD48-202ENST00000368046 CYP4X1Q8N118 509 aa9.25□□□□□ -0.93
CD48-202ENST00000368046 RNF175Q8N4F7 328 aa9.25□□□□□ -0.93
CD48-202ENST00000368046 AMER2Q8N7J2 671 aa9.25□□□□□ -0.93
CD48-202ENST00000368046 ACOT4Q8N9L9 421 aa9.25□□□□□ -0.93
CD48-202ENST00000368046 C7orf57Q8NEG2 295 aa9.25□□□□□ -0.93
CD48-202ENST00000368046 MYRIPQ8NFW9 859 aa9.25□□□□□ -0.93
CD48-202ENST00000368046 OR52B6Q8NGF0 335 aa9.25□□□□□ -0.93
CD48-202ENST00000368046 WDR20Q8TBZ3 569 aa9.25□□□□□ -0.93
CD48-202ENST00000368046 BRIX1Q8TDN6 353 aaKnown RBP9.25□□□□□ -0.93
CD48-202ENST00000368046 PPP4R1Q8TF05 950 aa9.25□□□□□ -0.93
CD48-202ENST00000368046 TSLPQ969D9 159 aa9.25□□□□□ -0.93
CD48-202ENST00000368046 MAGEB10Q96LZ2 347 aaPredicted RBP9.25□□□□□ -0.93
CD48-202ENST00000368046 MTERF1Q99551 399 aaKnown RBP9.25□□□□□ -0.93
CD48-202ENST00000368046 CENPKQ9BS16 269 aa9.25□□□□□ -0.93
CD48-202ENST00000368046 LYRM4Q9HD34 91 aa9.25□□□□□ -0.93
CD48-202ENST00000368046 SEMA4BQ9NPR2 832 aaPredicted RBP9.25□□□□□ -0.93
CD48-202ENST00000368046 NECTIN3Q9NQS3 549 aa9.25□□□□□ -0.93
CD48-202ENST00000368046 PRTFDC1Q9NRG1 225 aa9.25□□□□□ -0.93
CD48-202ENST00000368046 MS4A12Q9NXJ0 267 aa9.25□□□□□ -0.93
CD48-202ENST00000368046 STMN3Q9NZ72 180 aa9.25□□□□□ -0.93
CD48-202ENST00000368046 KCMF1Q9P0J7 381 aa9.25□□□□□ -0.93
CD48-202ENST00000368046 PTGFRNQ9P2B2 879 aa9.25□□□□□ -0.93
CD48-202ENST00000368046 TEKT2Q9UIF3 430 aa9.25□□□□□ -0.93
CD48-202ENST00000368046 GRID1Q9ULK0 1009 aa9.25□□□□□ -0.93
CD48-202ENST00000368046 PPT2Q9UMR5 302 aa9.25□□□□□ -0.93
CD48-202ENST00000368046 COL6A6A6NMZ7 2263 aa9.25□□□□□ -0.93
CD48-202ENST00000368046 ANKRD12Q6UB98 2062 aa9.24□□□□□ -0.93
CD48-202ENST00000368046 IGKV3D-11A0A0A0MRZ8 115 aa9.24□□□□□ -0.93
CD48-202ENST00000368046 TLDC2A0PJX2 215 aa9.24□□□□□ -0.93
CD48-202ENST00000368046 SYNDIG1LA6NDD5 238 aa9.24□□□□□ -0.93
CD48-202ENST00000368046 A8MUI8 341 aa9.24□□□□□ -0.93
CD48-202ENST00000368046 SAP18O00422 153 aaKnown RBP9.24□□□□□ -0.93
CD48-202ENST00000368046 RTCAO00442 366 aaKnown RBP9.24□□□□□ -0.93
CD48-202ENST00000368046 PPP6CO00743 305 aa9.24□□□□□ -0.93
CD48-202ENST00000368046 SH3BGRLO75368 114 aa9.24□□□□□ -0.93
CD48-202ENST00000368046 SUPT7LO94864 414 aa9.24□□□□□ -0.93
CD48-202ENST00000368046 SCELO95171 688 aa9.24□□□□□ -0.93
CD48-202ENST00000368046 OTCP00480 354 aa9.24□□□□□ -0.93
CD48-202ENST00000368046 CELA2AP08217 269 aa9.24□□□□□ -0.93
CD48-202ENST00000368046 RPS17P08708 135 aaKnown RBP9.24□□□□□ -0.93
CD48-202ENST00000368046 NUDT17P0C025 328 aa9.24□□□□□ -0.93
CD48-202ENST00000368046 MAOAP21397 527 aa9.24□□□□□ -0.93
CD48-202ENST00000368046 HIST1H1TP22492 207 aaPredicted RBP9.24□□□□□ -0.93
CD48-202ENST00000368046 ATP5F1P24539 256 aaPredicted RBP9.24□□□□□ -0.93
CD48-202ENST00000368046 CERS1P27544 350 aa9.24□□□□□ -0.93
CD48-202ENST00000368046 CRHR1P34998 444 aa9.24□□□□□ -0.93
CD48-202ENST00000368046 SOX11P35716 441 aa9.24□□□□□ -0.93
CD48-202ENST00000368046 ARL1P40616 181 aaPredicted RBP9.24□□□□□ -0.93
CD48-202ENST00000368046 CD97P48960 835 aa9.24□□□□□ -0.93
CD48-202ENST00000368046 NEK2P51955 445 aa9.24□□□□□ -0.93
CD48-202ENST00000368046 CDH13P55290 713 aa9.24□□□□□ -0.93
CD48-202ENST00000368046 SLC26A5P58743 744 aa9.24□□□□□ -0.93
CD48-202ENST00000368046 RPS13P62277 151 aaKnown RBP9.24□□□□□ -0.93
CD48-202ENST00000368046 HERVK_113P63132 956 aa9.24□□□□□ -0.93
CD48-202ENST00000368046 CLCQ05315 142 aa9.24□□□□□ -0.93
CD48-202ENST00000368046 BIKQ13323 160 aa9.24□□□□□ -0.93
CD48-202ENST00000368046 DDX39BQ13838 428 aaKnown RBP9.24□□□□□ -0.93
CD48-202ENST00000368046 INPP5JQ15735 1006 aaPredicted RBP9.24□□□□□ -0.93
CD48-202ENST00000368046 IGFBP7Q16270 282 aa9.24□□□□□ -0.93
CD48-202ENST00000368046 ERCC6LQ2NKX8 1250 aa9.24□□□□□ -0.93
CD48-202ENST00000368046 ZNF678Q5SXM1 525 aa9.24□□□□□ -0.93
CD48-202ENST00000368046 ABHD17BQ5VST6 288 aa9.24□□□□□ -0.93
CD48-202ENST00000368046 TTC19Q6DKK2 380 aaPredicted RBP9.24□□□□□ -0.93
CD48-202ENST00000368046 EMBQ6PCB8 327 aa9.24□□□□□ -0.93
CD48-202ENST00000368046 ZNF793Q6ZN11 406 aa9.24□□□□□ -0.93
CD48-202ENST00000368046 SIRT6Q8N6T7 355 aa9.24□□□□□ -0.93
CD48-202ENST00000368046 Q8NA96 180 aa9.24□□□□□ -0.93
CD48-202ENST00000368046 OR4F6Q8NGB9 312 aa9.24□□□□□ -0.93
CD48-202ENST00000368046 ELP5Q8TE02 316 aa9.24□□□□□ -0.93
CD48-202ENST00000368046 ZNF483Q8TF39 744 aaPredicted RBP9.24□□□□□ -0.93
CD48-202ENST00000368046 MTFMTQ96DP5 389 aaKnown RBP9.24□□□□□ -0.93
CD48-202ENST00000368046 CCDC126Q96EE4 140 aa9.24□□□□□ -0.93
CD48-202ENST00000368046 ZNF354BQ96LW1 612 aa9.24□□□□□ -0.93
CD48-202ENST00000368046 NSUN5Q96P11 429 aaKnown RBP9.24□□□□□ -0.93
CD48-202ENST00000368046 CDK15Q96Q40 435 aa9.24□□□□□ -0.93
CD48-202ENST00000368046 MAPKAP1Q9BPZ7 522 aa9.24□□□□□ -0.93
CD48-202ENST00000368046 ERVK-6Q9BXR3 956 aa9.24□□□□□ -0.93
CD48-202ENST00000368046 ROPN1BQ9BZX4 212 aaPredicted RBP9.24□□□□□ -0.93
CD48-202ENST00000368046 TRIM4Q9C037 500 aa9.24□□□□□ -0.93
CD48-202ENST00000368046 ROPN1Q9HAT0 212 aaPredicted RBP9.24□□□□□ -0.93
CD48-202ENST00000368046 KCNK13Q9HB14 408 aa9.24□□□□□ -0.93
CD48-202ENST00000368046 MMP25Q9NPA2 562 aa9.24□□□□□ -0.93
CD48-202ENST00000368046 DMRT3Q9NQL9 472 aa9.24□□□□□ -0.93
CD48-202ENST00000368046 SPACA6W5XKT8 324 aa9.24□□□□□ -0.93
CD48-202ENST00000368046 CCDC88CQ9P219 2028 aa9.24□□□□□ -0.93
CD48-202ENST00000368046 DYTNA2CJ06 578 aa9.23□□□□□ -0.93
CD48-202ENST00000368046 BLACEA4D250 179 aa9.23□□□□□ -0.93
CD48-202ENST00000368046 FOXO6A8MYZ6 492 aa9.23□□□□□ -0.93
CD48-202ENST00000368046 CDK2AP1O14519 115 aa9.23□□□□□ -0.93
CD48-202ENST00000368046 GLRA3O75311 464 aa9.23□□□□□ -0.93
CD48-202ENST00000368046 TUBBP07437 444 aa9.23□□□□□ -0.93
CD48-202ENST00000368046 UQCRHP07919 91 aa9.23□□□□□ -0.93
CD48-202ENST00000368046 TSPAN8P19075 237 aa9.23□□□□□ -0.93
CD48-202ENST00000368046 SSR2P43308 183 aa9.23□□□□□ -0.93
CD48-202ENST00000368046 SMCPP49901 116 aaPredicted RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms