RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 EBNA1BP2Q99848 306 aaKnown RBP7.8□□□□□ -1.16
HMGB1P39-201ENST00000366304 GSX2Q9BZM3 304 aa7.8□□□□□ -1.16
HMGB1P39-201ENST00000366304 SPNS1Q9H2V7 528 aa7.8□□□□□ -1.16
HMGB1P39-201ENST00000366304 RHBGQ9H310 441 aa7.8□□□□□ -1.16
HMGB1P39-201ENST00000366304 KLHL31Q9H511 634 aa7.8□□□□□ -1.16
HMGB1P39-201ENST00000366304 UBTD1Q9HAC8 227 aa7.8□□□□□ -1.16
HMGB1P39-201ENST00000366304 SH2D2AQ9NP31 389 aa7.8□□□□□ -1.16
HMGB1P39-201ENST00000366304 PNO1Q9NRX1 252 aaKnown RBP7.8□□□□□ -1.16
HMGB1P39-201ENST00000366304 CATSPERZQ9NTU4 200 aa7.8□□□□□ -1.16
HMGB1P39-201ENST00000366304 UTP6Q9NYH9 597 aaKnown RBP7.8□□□□□ -1.16
HMGB1P39-201ENST00000366304 TFR2Q9UP52 801 aa7.8□□□□□ -1.16
HMGB1P39-201ENST00000366304 TESMINQ9Y4I5 508 aa7.8□□□□□ -1.16
HMGB1P39-201ENST00000366304 SVEP1Q4LDE5 3571 aa7.8□□□□□ -1.16
HMGB1P39-201ENST00000366304 MGAM2Q2M2H8 2515 aa7.8□□□□□ -1.16
HMGB1P39-201ENST00000366304 EML6Q6ZMW3 1958 aa7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 ABCA1O95477 2261 aa7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 F8W8V4 182 aa7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 CEP104O60308 925 aa7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 ZFAND5O76080 213 aa7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 LRATO95237 230 aa7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 SYF2O95926 243 aaKnown RBP7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 CDH1P12830 882 aa7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 ALOX12P18054 663 aa7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 CD33P20138 364 aa7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 JAK1P23458 1154 aa7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 SKIV2L2P42285 1042 aaKnown RBP7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 SLCO1A2P46721 670 aa7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 HK2P52789 917 aa7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 ADARP55265 1226 aaKnown RBP7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 TBPL1P62380 186 aa7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 CRADDP78560 199 aa7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 TNP2Q05952 138 aa7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 CRYZQ08257 329 aaKnown RBP7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 HERC3Q15034 1050 aa7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 THEMIS2Q5TEJ8 643 aa7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 CYHR1Q6ZMK1 362 aa7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 MBOAT1Q6ZNC8 495 aa7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 RTL4Q6ZR62 310 aa7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 C22orf34Q6ZV56 151 aa7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 MTERF4Q7Z6M4 381 aaKnown RBP7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 PRUNE1Q86TP1 453 aa7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 LACC1Q8IV20 430 aa7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 SCUBE1Q8IWY4 988 aa7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 RHOT2Q8IXI1 618 aa7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 GPALPP1Q8IXQ4 340 aa7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 LRRC25Q8N386 305 aaPredicted RBP7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 C9orf106Q8NAJ2 232 aa7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 OR8K1Q8NGG5 319 aa7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 NEIL3Q8TAT5 605 aa7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 UTP15Q8TED0 518 aaKnown RBP7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 ASB11Q8WXH4 323 aa7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 VMP1Q96GC9 406 aa7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 PANX3Q96QZ0 392 aa7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 TTC1Q99614 292 aa7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 TIMP4Q99727 224 aa7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 C19orf24Q9BVV8 132 aa7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 EXO5Q9H790 373 aa7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 CHRAC1Q9NRG0 131 aa7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 ZNHIT6Q9NWK9 470 aaKnown RBP7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 RIMKLBQ9ULI2 386 aa7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 MED16Q9Y2X0 877 aa7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 TCAF1Q9Y4C2 921 aa7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 PCDHGB3Q9Y5G1 929 aa7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 MRFAP1Q9Y605 127 aa7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 RAI1Q7Z5J4 1906 aaPredicted RBP7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 USF3Q68DE3 2245 aa7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 ROS1P08922 2347 aa7.79□□□□□ -1.16
HMGB1P39-201ENST00000366304 MBD3L3A6NE82 208 aaPredicted RBP7.78□□□□□ -1.16
HMGB1P39-201ENST00000366304 GOLGA8KD6RF30 607 aa7.78□□□□□ -1.16
HMGB1P39-201ENST00000366304 GOLGA8TH3BQL2 631 aa7.78□□□□□ -1.16
HMGB1P39-201ENST00000366304 GFYI3L273 518 aa7.78□□□□□ -1.16
HMGB1P39-201ENST00000366304 KPNA5O15131 536 aa7.78□□□□□ -1.16
HMGB1P39-201ENST00000366304 NDUFS4O43181 175 aa7.78□□□□□ -1.16
HMGB1P39-201ENST00000366304 CTIFO43310 598 aaKnown RBP7.78□□□□□ -1.16
HMGB1P39-201ENST00000366304 STK10O94804 968 aaKnown RBP7.78□□□□□ -1.16
HMGB1P39-201ENST00000366304 IFNA2P01563 188 aa7.78□□□□□ -1.16
HMGB1P39-201ENST00000366304 ADRA1DP25100 572 aa7.78□□□□□ -1.16
HMGB1P39-201ENST00000366304 CTSSP25774 331 aa7.78□□□□□ -1.16
HMGB1P39-201ENST00000366304 HSD17B2P37059 387 aa7.78□□□□□ -1.16
HMGB1P39-201ENST00000366304 HNF4AP41235 474 aa7.78□□□□□ -1.16
HMGB1P39-201ENST00000366304 TTPAP49638 278 aa7.78□□□□□ -1.16
HMGB1P39-201ENST00000366304 GSK3AP49840 483 aa7.78□□□□□ -1.16
HMGB1P39-201ENST00000366304 CLCN7P51798 805 aa7.78□□□□□ -1.16
HMGB1P39-201ENST00000366304 RAB8AP61006 207 aa7.78□□□□□ -1.16
HMGB1P39-201ENST00000366304 PRAMEP78395 509 aa7.78□□□□□ -1.16
HMGB1P39-201ENST00000366304 RUNX1T1Q06455 604 aa7.78□□□□□ -1.16
HMGB1P39-201ENST00000366304 CDH17Q12864 832 aa7.78□□□□□ -1.16
HMGB1P39-201ENST00000366304 CUL1Q13616 776 aa7.78□□□□□ -1.16
HMGB1P39-201ENST00000366304 IQCB1Q15051 598 aa7.78□□□□□ -1.16
HMGB1P39-201ENST00000366304 TERF2Q15554 542 aa7.78□□□□□ -1.16
HMGB1P39-201ENST00000366304 RNF187Q5TA31 235 aaPredicted RBP7.78□□□□□ -1.16
HMGB1P39-201ENST00000366304 CCDC181Q5TID7 509 aa7.78□□□□□ -1.16
HMGB1P39-201ENST00000366304 HECTD2Q5U5R9 776 aa7.78□□□□□ -1.16
HMGB1P39-201ENST00000366304 NSUN5P2Q63ZY6 315 aa7.78□□□□□ -1.16
HMGB1P39-201ENST00000366304 C1orf229Q6ZS94 237 aaPredicted RBP7.78□□□□□ -1.16
HMGB1P39-201ENST00000366304 LUZP2Q86TE4 346 aa7.78□□□□□ -1.16
HMGB1P39-201ENST00000366304 CA13Q8N1Q1 262 aa7.78□□□□□ -1.16
HMGB1P39-201ENST00000366304 MBD3L2Q8NHZ7 208 aaPredicted RBP7.78□□□□□ -1.16
HMGB1P39-201ENST00000366304 SLC44A1Q8WWI5 657 aa7.78□□□□□ -1.16
HMGB1P39-201ENST00000366304 ISL2Q96A47 359 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms