RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 HCFC2Q9Y5Z7 792 aa12.94□□□□□ -0.34
LDB3-202ENST00000361373 ZNF821O75541 412 aaPredicted RBP12.94□□□□□ -0.34
LDB3-202ENST00000361373 EDN1P05305 212 aa12.94□□□□□ -0.34
LDB3-202ENST00000361373 IFI30P13284 250 aa12.94□□□□□ -0.34
LDB3-202ENST00000361373 HSD11B1P28845 292 aa12.94□□□□□ -0.34
LDB3-202ENST00000361373 COLEC12Q5KU26 742 aa12.94□□□□□ -0.34
LDB3-202ENST00000361373 FAM182AQ5T1J6 154 aa12.94□□□□□ -0.34
LDB3-202ENST00000361373 GRHL2Q6ISB3 625 aa12.94□□□□□ -0.34
LDB3-202ENST00000361373 ISCA2Q86U28 154 aa12.94□□□□□ -0.34
LDB3-202ENST00000361373 FUBP1Q96AE4 644 aaKnown RBP12.94□□□□□ -0.34
LDB3-202ENST00000361373 METTL2AQ96IZ6 378 aaKnown RBP12.94□□□□□ -0.34
LDB3-202ENST00000361373 ZNF778Q96MU6 729 aa12.94□□□□□ -0.34
LDB3-202ENST00000361373 NSUN5Q96P11 429 aaKnown RBP12.94□□□□□ -0.34
LDB3-202ENST00000361373 MND1Q9BWT6 205 aa12.94□□□□□ -0.34
LDB3-202ENST00000361373 RPF2Q9H7B2 306 aaKnown RBP12.94□□□□□ -0.34
LDB3-202ENST00000361373 RDH14Q9HBH5 336 aa12.94□□□□□ -0.34
LDB3-202ENST00000361373 KIR2DS5A0A0G2JLQ3 304 aa12.94□□□□□ -0.34
LDB3-202ENST00000361373 A0A0G2JNG1 304 aa12.94□□□□□ -0.34
LDB3-202ENST00000361373 LOC100130705A0A1B0GUX0 176 aa12.94□□□□□ -0.34
LDB3-202ENST00000361373 KIR2DS3K7RE56 304 aa12.94□□□□□ -0.34
LDB3-202ENST00000361373 TRAPPC6AO75865 159 aa12.94□□□□□ -0.34
LDB3-202ENST00000361373 SLC6A4P31645 630 aa12.94□□□□□ -0.34
LDB3-202ENST00000361373 RPS15P62841 145 aaKnown RBP12.94□□□□□ -0.34
LDB3-202ENST00000361373 HTRA3P83110 453 aa12.94□□□□□ -0.34
LDB3-202ENST00000361373 KIR2DS5Q14953 304 aa12.94□□□□□ -0.34
LDB3-202ENST00000361373 CTC1Q2NKJ3 1217 aa12.94□□□□□ -0.34
LDB3-202ENST00000361373 KIAA1614Q5VZ46 1190 aa12.94□□□□□ -0.34
LDB3-202ENST00000361373 MINDY1Q8N5J2 469 aa12.94□□□□□ -0.34
LDB3-202ENST00000361373 HUS1BQ8NHY5 278 aa12.94□□□□□ -0.34
LDB3-202ENST00000361373 ZDHHC1Q8WTX9 485 aa12.94□□□□□ -0.34
LDB3-202ENST00000361373 NAT14Q8WUY8 206 aa12.94□□□□□ -0.34
LDB3-202ENST00000361373 NXPE3Q969Y0 559 aa12.94□□□□□ -0.34
LDB3-202ENST00000361373 COQ8BQ96D53 544 aa12.94□□□□□ -0.34
LDB3-202ENST00000361373 TMCO6Q96DC7 493 aa12.94□□□□□ -0.34
LDB3-202ENST00000361373 LDAHQ9H6V9 325 aa12.94□□□□□ -0.34
LDB3-202ENST00000361373 GRHPRQ9UBQ7 328 aa12.94□□□□□ -0.34
LDB3-202ENST00000361373 MUSKO15146 869 aa12.93□□□□□ -0.34
LDB3-202ENST00000361373 HLA-DPB1P04440 258 aa12.93□□□□□ -0.34
LDB3-202ENST00000361373 HOXD8P13378 290 aaPredicted RBP12.93□□□□□ -0.34
LDB3-202ENST00000361373 GJA8P48165 433 aa12.93□□□□□ -0.34
LDB3-202ENST00000361373 OR4D2P58180 307 aa12.93□□□□□ -0.34
LDB3-202ENST00000361373 CCINQ13939 588 aa12.93□□□□□ -0.34
LDB3-202ENST00000361373 PTGR1Q14914 329 aa12.93□□□□□ -0.34
LDB3-202ENST00000361373 C5orf22Q49AR2 442 aa12.93□□□□□ -0.34
LDB3-202ENST00000361373 RAB43Q86YS6 212 aa12.93□□□□□ -0.34
LDB3-202ENST00000361373 OR4C15Q8NGM1 316 aa12.93□□□□□ -0.34
LDB3-202ENST00000361373 SLC22A8Q8TCC7 542 aa12.93□□□□□ -0.34
LDB3-202ENST00000361373 TSACCQ96A04 125 aaPredicted RBP12.93□□□□□ -0.34
LDB3-202ENST00000361373 MSANTD3Q96H12 275 aa12.93□□□□□ -0.34
LDB3-202ENST00000361373 PHF12Q96QT6 1004 aa12.93□□□□□ -0.34
LDB3-202ENST00000361373 CENPMQ9NSP4 180 aa12.93□□□□□ -0.34
LDB3-202ENST00000361373 GLOD5A6NK44 160 aa12.93□□□□□ -0.34
LDB3-202ENST00000361373 CDH11P55287 796 aa12.93□□□□□ -0.34
LDB3-202ENST00000361373 SHKBP1Q8TBC3 707 aa12.93□□□□□ -0.34
LDB3-202ENST00000361373 F2RL3Q96RI0 385 aa12.93□□□□□ -0.34
LDB3-202ENST00000361373 IL4I1Q96RQ9 567 aa12.93□□□□□ -0.34
LDB3-202ENST00000361373 DOHHQ9BU89 302 aa12.93□□□□□ -0.34
LDB3-202ENST00000361373 APOOQ9BUR5 198 aa12.93□□□□□ -0.34
LDB3-202ENST00000361373 PCDHB16Q9NRJ7 776 aa12.93□□□□□ -0.34
LDB3-202ENST00000361373 PTTG2Q9NZH5 202 aa12.93□□□□□ -0.34
LDB3-202ENST00000361373 SEC14L4Q9UDX3 406 aa12.93□□□□□ -0.34
LDB3-202ENST00000361373 PCTPQ9UKL6 214 aa12.93□□□□□ -0.34
LDB3-202ENST00000361373 LRRC42Q9Y546 428 aa12.93□□□□□ -0.34
LDB3-202ENST00000361373 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.93□□□□□ -0.34
LDB3-202ENST00000361373 FAAHO00519 579 aa12.93□□□□□ -0.34
LDB3-202ENST00000361373 KLHL18O94889 574 aa12.93□□□□□ -0.34
LDB3-202ENST00000361373 PROS1P07225 676 aa12.93□□□□□ -0.34
LDB3-202ENST00000361373 C7P10643 843 aa12.93□□□□□ -0.34
LDB3-202ENST00000361373 PKDCCQ504Y2 493 aa12.93□□□□□ -0.34
LDB3-202ENST00000361373 RAB6CQ53S08 254 aa12.93□□□□□ -0.34
LDB3-202ENST00000361373 IL22RA1Q8N6P7 574 aa12.93□□□□□ -0.34
LDB3-202ENST00000361373 IL17FQ96PD4 163 aa12.93□□□□□ -0.34
LDB3-202ENST00000361373 RAB6CQ9H0N0 254 aa12.93□□□□□ -0.34
LDB3-202ENST00000361373 IFT46Q9NQC8 304 aa12.93□□□□□ -0.34
LDB3-202ENST00000361373 HCFC1R1Q9NWW0 138 aa12.93□□□□□ -0.34
LDB3-202ENST00000361373 MBD2Q9UBB5 411 aa12.93□□□□□ -0.34
LDB3-202ENST00000361373 SPO11Q9Y5K1 396 aa12.93□□□□□ -0.34
LDB3-202ENST00000361373 NPIPB15A6NHN6 443 aaPredicted RBP12.93□□□□□ -0.34
LDB3-202ENST00000361373 RBMXL2O75526 392 aaKnown RBP12.93□□□□□ -0.34
LDB3-202ENST00000361373 CSTAP01040 98 aa12.93□□□□□ -0.34
LDB3-202ENST00000361373 GABRA3P34903 492 aa12.93□□□□□ -0.34
LDB3-202ENST00000361373 NFE2L1Q14494 772 aa12.93□□□□□ -0.34
LDB3-202ENST00000361373 BMFQ96LC9 184 aa12.93□□□□□ -0.34
LDB3-202ENST00000361373 CHMP1AQ9HD42 196 aaPredicted RBP12.93□□□□□ -0.34
LDB3-202ENST00000361373 ABCB9Q9NP78 766 aa12.93□□□□□ -0.34
LDB3-202ENST00000361373 GIN1Q9NXP7 522 aa12.93□□□□□ -0.34
LDB3-202ENST00000361373 PLCL2Q9UPR0 1127 aa12.93□□□□□ -0.34
LDB3-202ENST00000361373 NOX1Q9Y5S8 564 aa12.93□□□□□ -0.34
LDB3-202ENST00000361373 SH3PXD2BA1X283 911 aa12.92□□□□□ -0.34
LDB3-202ENST00000361373 ZNF860A6NHJ4 632 aa12.92□□□□□ -0.34
LDB3-202ENST00000361373 MAPK3P27361 379 aaPredicted RBP12.92□□□□□ -0.34
LDB3-202ENST00000361373 GPR143P51810 404 aa12.92□□□□□ -0.34
LDB3-202ENST00000361373 FAM189BP81408 668 aa12.92□□□□□ -0.34
LDB3-202ENST00000361373 FCHO2Q0JRZ9 810 aa12.92□□□□□ -0.34
LDB3-202ENST00000361373 RCAN2Q14206 197 aa12.92□□□□□ -0.34
LDB3-202ENST00000361373 KIR2DS3Q14952 304 aa12.92□□□□□ -0.34
LDB3-202ENST00000361373 LRIF1Q5T3J3 769 aa12.92□□□□□ -0.34
LDB3-202ENST00000361373 KANK2Q63ZY3 851 aa12.92□□□□□ -0.34
LDB3-202ENST00000361373 SHQ1Q6PI26 577 aaKnown RBP12.92□□□□□ -0.34
LDB3-202ENST00000361373 BLOC1S3Q6QNY0 202 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms