RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 EPCAMP16422 314 aa13.42□□□□□ -0.26
SMC5-201ENST00000361138 JUNBP17275 347 aaPredicted RBP13.42□□□□□ -0.26
SMC5-201ENST00000361138 ACRV1P26436 265 aa13.42□□□□□ -0.26
SMC5-201ENST00000361138 CAMK1Q14012 370 aa13.42□□□□□ -0.26
SMC5-201ENST00000361138 PRAMEF14Q5SWL7 426 aa13.42□□□□□ -0.26
SMC5-201ENST00000361138 UBXN11Q5T124 520 aa13.42□□□□□ -0.26
SMC5-201ENST00000361138 PRAMEF13Q5VWM6 474 aa13.42□□□□□ -0.26
SMC5-201ENST00000361138 STOML3Q8TAV4 291 aa13.42□□□□□ -0.26
SMC5-201ENST00000361138 GON7Q9BXV9 100 aa13.42□□□□□ -0.26
SMC5-201ENST00000361138 TAS2R3Q9NYW6 316 aa13.42□□□□□ -0.26
SMC5-201ENST00000361138 DUXAA6NLW8 204 aa13.42□□□□□ -0.26
SMC5-201ENST00000361138 ARNTLO00327 626 aa13.42□□□□□ -0.26
SMC5-201ENST00000361138 FLRT2O43155 660 aa13.42□□□□□ -0.26
SMC5-201ENST00000361138 GGT2P36268 569 aa13.42□□□□□ -0.26
SMC5-201ENST00000361138 GRSF1Q12849 480 aaKnown RBP eCLIP13.42□□□□□ -0.26
SMC5-201ENST00000361138 SEC23BQ15437 767 aa13.42□□□□□ -0.26
SMC5-201ENST00000361138 BCL2L15Q5TBC7 163 aa13.42□□□□□ -0.26
SMC5-201ENST00000361138 LRRN1Q6UXK5 716 aa13.42□□□□□ -0.26
SMC5-201ENST00000361138 GID4Q8IVV7 300 aa13.42□□□□□ -0.26
SMC5-201ENST00000361138 DDX60Q8IY21 1712 aaKnown RBP13.42□□□□□ -0.26
SMC5-201ENST00000361138 OR10G6Q8NH81 332 aa13.42□□□□□ -0.26
SMC5-201ENST00000361138 ADAMTS16Q8TE57 1224 aa13.42□□□□□ -0.26
SMC5-201ENST00000361138 OR4K3Q96R72 315 aa13.42□□□□□ -0.26
SMC5-201ENST00000361138 GPRC5BQ9NZH0 403 aa13.42□□□□□ -0.26
SMC5-201ENST00000361138 MGAT4CQ9UBM8 478 aa13.42□□□□□ -0.26
SMC5-201ENST00000361138 GNG8Q9UK08 70 aa13.42□□□□□ -0.26
SMC5-201ENST00000361138 UTS2RQ9UKP6 389 aa13.42□□□□□ -0.26
SMC5-201ENST00000361138 ADGRF1Q5T601 910 aa13.42□□□□□ -0.26
SMC5-201ENST00000361138 AGTRAPQ6RW13 159 aa13.42□□□□□ -0.26
SMC5-201ENST00000361138 TICAM1Q8IUC6 712 aa13.42□□□□□ -0.26
SMC5-201ENST00000361138 SDR16C5Q8N3Y7 309 aa13.42□□□□□ -0.26
SMC5-201ENST00000361138 COX18Q8N8Q8 333 aa13.42□□□□□ -0.26
SMC5-201ENST00000361138 TCEAL4Q96EI5 215 aa13.42□□□□□ -0.26
SMC5-201ENST00000361138 NLGN3Q9NZ94 848 aa13.42□□□□□ -0.26
SMC5-201ENST00000361138 KELP23276 732 aa13.42□□□□□ -0.26
SMC5-201ENST00000361138 APLP1P51693 650 aa13.42□□□□□ -0.26
SMC5-201ENST00000361138 NFATC2Q13469 925 aa13.42□□□□□ -0.26
SMC5-201ENST00000361138 FAAH2Q6GMR7 532 aa13.42□□□□□ -0.26
SMC5-201ENST00000361138 GDPGP1Q6ZNW5 385 aa13.42□□□□□ -0.26
SMC5-201ENST00000361138 ZNF227Q86WZ6 799 aa13.42□□□□□ -0.26
SMC5-201ENST00000361138 Q8N9G6 341 aaPredicted RBP13.42□□□□□ -0.26
SMC5-201ENST00000361138 SHKBP1Q8TBC3 707 aa13.42□□□□□ -0.26
SMC5-201ENST00000361138 TRMT61BQ9BVS5 477 aaKnown RBP13.42□□□□□ -0.26
SMC5-201ENST00000361138 OR51B5Q9H339 312 aa13.42□□□□□ -0.26
SMC5-201ENST00000361138 ARHGEF15O94989 841 aa13.42□□□□□ -0.26
SMC5-201ENST00000361138 SLC27A4Q6P1M0 643 aa13.42□□□□□ -0.26
SMC5-201ENST00000361138 GTF2H4Q92759 462 aa13.42□□□□□ -0.26
SMC5-201ENST00000361138 OR2AG1Q9H205 316 aa13.42□□□□□ -0.26
SMC5-201ENST00000361138 TREX1Q9NSU2 369 aa13.42□□□□□ -0.26
SMC5-201ENST00000361138 VAPAQ9P0L0 249 aa13.42□□□□□ -0.26
SMC5-201ENST00000361138 DPP7Q9UHL4 492 aa13.42□□□□□ -0.26
SMC5-201ENST00000361138 MEMO1Q9Y316 297 aa13.42□□□□□ -0.26
SMC5-201ENST00000361138 LHCGRP22888 699 aa13.41□□□□□ -0.26
SMC5-201ENST00000361138 CNR2P34972 360 aa13.41□□□□□ -0.26
SMC5-201ENST00000361138 SOX3P41225 446 aa13.41□□□□□ -0.26
SMC5-201ENST00000361138 CEBPGP53567 150 aa13.41□□□□□ -0.26
SMC5-201ENST00000361138 IRAK1BP1Q5VVH5 260 aa13.41□□□□□ -0.26
SMC5-201ENST00000361138 RANBP10Q6VN20 620 aa13.41□□□□□ -0.26
SMC5-201ENST00000361138 PELI3Q8N2H9 469 aa13.41□□□□□ -0.26
SMC5-201ENST00000361138 ARL14EPQ8N8R7 260 aaPredicted RBP13.41□□□□□ -0.26
SMC5-201ENST00000361138 GPR150Q8NGU9 434 aa13.41□□□□□ -0.26
SMC5-201ENST00000361138 GRHL3Q8TE85 626 aa13.41□□□□□ -0.26
SMC5-201ENST00000361138 NKD1Q969G9 470 aa13.41□□□□□ -0.26
SMC5-201ENST00000361138 C12orf66Q96MD2 445 aa13.41□□□□□ -0.26
SMC5-201ENST00000361138 ZSWIM3Q96MP5 696 aa13.41□□□□□ -0.26
SMC5-201ENST00000361138 RIOK2Q9BVS4 552 aaKnown RBP13.41□□□□□ -0.26
SMC5-201ENST00000361138 TRIM2Q9C040 744 aa13.41□□□□□ -0.26
SMC5-201ENST00000361138 FKBP14Q9NWM8 211 aa13.41□□□□□ -0.26
SMC5-201ENST00000361138 RBPJLQ9UBG7 517 aa13.41□□□□□ -0.26
SMC5-201ENST00000361138 CD300AQ9UGN4 299 aa13.41□□□□□ -0.26
SMC5-201ENST00000361138 ATPIF1Q9UII2 106 aa13.41□□□□□ -0.26
SMC5-201ENST00000361138 AOC2O75106 756 aa13.41□□□□□ -0.26
SMC5-201ENST00000361138 RPS17P08708 135 aaKnown RBP13.41□□□□□ -0.26
SMC5-201ENST00000361138 MLLT1Q03111 559 aaPredicted RBP13.41□□□□□ -0.26
SMC5-201ENST00000361138 TRAM2Q15035 370 aa13.41□□□□□ -0.26
SMC5-201ENST00000361138 PCBP2Q15366 365 aaKnown RBP eCLIP13.41□□□□□ -0.26
SMC5-201ENST00000361138 GAL3ST1Q99999 423 aa13.41□□□□□ -0.26
SMC5-201ENST00000361138 GMPR2Q9P2T1 348 aaKnown RBP13.41□□□□□ -0.26
SMC5-201ENST00000361138 SCN2BO60939 215 aa13.41□□□□□ -0.26
SMC5-201ENST00000361138 ARSAP15289 507 aa13.41□□□□□ -0.26
SMC5-201ENST00000361138 FNTBP49356 437 aa13.41□□□□□ -0.26
SMC5-201ENST00000361138 SELPLGQ14242 412 aa13.41□□□□□ -0.26
SMC5-201ENST00000361138 SCGB2B2Q4G0G5 96 aa13.41□□□□□ -0.26
SMC5-201ENST00000361138 STEAP3Q658P3 488 aa13.41□□□□□ -0.26
SMC5-201ENST00000361138 UBQLNLQ8IYU4 475 aa13.41□□□□□ -0.26
SMC5-201ENST00000361138 OR51G2Q8NGK0 314 aa13.41□□□□□ -0.26
SMC5-201ENST00000361138 CCDC120Q96HB5 630 aa13.41□□□□□ -0.26
SMC5-201ENST00000361138 LRR1Q96L50 414 aa13.41□□□□□ -0.26
SMC5-201ENST00000361138 SAV1Q9H4B6 383 aaPredicted RBP13.41□□□□□ -0.26
SMC5-201ENST00000361138 CUEDC1Q9NWM3 386 aaPredicted RBP13.41□□□□□ -0.26
SMC5-201ENST00000361138 SLC39A1Q9NY26 324 aa13.41□□□□□ -0.26
SMC5-201ENST00000361138 A0A1B0GUL6 1792 aa13.41□□□□□ -0.26
SMC5-201ENST00000361138 NUP98P52948 1817 aa13.41□□□□□ -0.26
SMC5-201ENST00000361138 AHDC1Q5TGY3 1603 aaPredicted RBP13.41□□□□□ -0.26
SMC5-201ENST00000361138 PROM1O43490 865 aa13.41□□□□□ -0.26
SMC5-201ENST00000361138 PRSS56P0CW18 603 aa13.41□□□□□ -0.26
SMC5-201ENST00000361138 PRKACAP17612 351 aa13.41□□□□□ -0.26
SMC5-201ENST00000361138 HSD17B2P37059 387 aa13.41□□□□□ -0.26
SMC5-201ENST00000361138 PM20D1Q6GTS8 502 aa13.41□□□□□ -0.26
SMC5-201ENST00000361138 LHFPL3Q86UP9 236 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms