RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 SERPINA1P01009 418 aa7.02□□□□□ -1.29
CLCN3-202ENST00000360642 HIST1H2AGP0C0S8 130 aaPredicted RBP7.02□□□□□ -1.29
CLCN3-202ENST00000360642 FAHP16930 419 aa7.02□□□□□ -1.29
CLCN3-202ENST00000360642 HIST1H2ADP20671 130 aa7.02□□□□□ -1.29
CLCN3-202ENST00000360642 MATN1P21941 496 aa7.02□□□□□ -1.29
CLCN3-202ENST00000360642 PFN3P60673 137 aa7.02□□□□□ -1.29
CLCN3-202ENST00000360642 ABHD18Q0P651 414 aa7.02□□□□□ -1.29
CLCN3-202ENST00000360642 TMEM26Q6ZUK4 368 aa7.02□□□□□ -1.29
CLCN3-202ENST00000360642 ADHFE1Q8IWW8 467 aa7.02□□□□□ -1.29
CLCN3-202ENST00000360642 C8orf59Q8N0T1 100 aaPredicted RBP7.02□□□□□ -1.29
CLCN3-202ENST00000360642 OR5K1Q8NHB7 308 aa7.02□□□□□ -1.29
CLCN3-202ENST00000360642 PYURFQ96I23 114 aa7.02□□□□□ -1.29
CLCN3-202ENST00000360642 HIST1H2AHQ96KK5 128 aa7.02□□□□□ -1.29
CLCN3-202ENST00000360642 EGLN2Q96KS0 407 aa7.02□□□□□ -1.29
CLCN3-202ENST00000360642 DEFB118Q96PH6 123 aa7.02□□□□□ -1.29
CLCN3-202ENST00000360642 HIST1H2AJQ99878 128 aa7.02□□□□□ -1.29
CLCN3-202ENST00000360642 H2AFJQ9BTM1 129 aa7.02□□□□□ -1.29
CLCN3-202ENST00000360642 NAA50Q9GZZ1 169 aaKnown RBP7.02□□□□□ -1.29
CLCN3-202ENST00000360642 LTB4R2Q9NPC1 389 aa7.02□□□□□ -1.29
CLCN3-202ENST00000360642 SLC22A14Q9Y267 594 aa7.02□□□□□ -1.29
CLCN3-202ENST00000360642 A0A0J9YVX5 310 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 A0A1W2PPC4 97 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 A0A1W2PQ67 120 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 WASH3PC4AMC7 463 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 C9orf172C9J069 976 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 GRM6O15303 877 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 SLC16A6O15403 523 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 SCN2BO60939 215 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 LRG1P02750 347 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 UGT2B4P06133 528 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 HTR1AP08908 422 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 GJA1P17302 382 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 PFKLP17858 780 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 GJA4P35212 333 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 TMBIM6P55061 237 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 AP1S2P56377 157 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 ISL1P61371 349 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 DEFB103AP81534 67 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 TLE2Q04725 743 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 SLC14A1Q13336 389 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 TUBA3CQ13748 450 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 NEDD8Q15843 81 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 CTU2Q2VPK5 515 aaKnown RBP7.01□□□□□ -1.29
CLCN3-202ENST00000360642 C6orf141Q5SZD1 244 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 FRG2Q64ET8 278 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 C16orf54Q6UWD8 224 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 SERPINA13PQ6UXR4 307 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 R3HCC1LQ7Z5L2 792 aaKnown RBP7.01□□□□□ -1.29
CLCN3-202ENST00000360642 RBM23Q86U06 439 aaKnown RBP7.01□□□□□ -1.29
CLCN3-202ENST00000360642 SERPINA11Q86U17 422 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 DRAXINQ8NBI3 349 aaPredicted RBP7.01□□□□□ -1.29
CLCN3-202ENST00000360642 CHDHQ8NE62 594 aaPredicted RBP7.01□□□□□ -1.29
CLCN3-202ENST00000360642 FAM81AQ8TBF8 368 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 PYCR2Q96C36 320 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 SDCCAG3Q96C92 435 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 FAM120BQ96EK7 910 aaKnown RBP7.01□□□□□ -1.29
CLCN3-202ENST00000360642 C11orf24Q96F05 449 aaPredicted RBP7.01□□□□□ -1.29
CLCN3-202ENST00000360642 TSSK3Q96PN8 268 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 FRG2BQ96QU4 278 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 ING2Q9H160 280 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 ZBP1Q9H171 429 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 ZDHHC6Q9H6R6 413 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 SLCO3A1Q9UIG8 710 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 TBX21Q9UL17 535 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 RAXQ9Y2V3 346 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 C1QTNF9BB2RNN3 333 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 UGDHO60701 494 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 SLCO2B1O94956 709 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 SEMG1P04279 462 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 FSTP19883 344 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 GSTM2P28161 218 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 SOX8P57073 446 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 C21orf58P58505 322 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 GABARAPL2P60520 117 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 ZNF33BQ06732 778 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 TRIM60Q495X7 471 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 FGD3Q5JSP0 725 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 CES5AQ6NT32 575 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 ANKRD46Q86W74 232 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 DCP2Q8IU60 420 aaKnown RBP7.01□□□□□ -1.29
CLCN3-202ENST00000360642 CROCCP3Q8IVE0 287 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 SLC22A15Q8IZD6 547 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 SPARTQ8N0X7 666 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 EID3Q8N140 333 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 PREBQ9HCU5 417 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 DNAJC11Q9NVH1 559 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 CD84Q9UIB8 345 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 ERVK-11Q9UQG0 969 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 CCL26Q9Y258 94 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 LOC100130705A0A1B0GUX0 176 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 A0A1W2PPW3 197 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 KRT87PA6NCN2 255 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 GNGT2O14610 69 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 RECQL5O94762 991 aaPredicted RBP7.01□□□□□ -1.29
CLCN3-202ENST00000360642 CCNDBP1O95273 360 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 MED26O95402 600 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 C1QCP02747 245 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 INHBBP09529 407 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 CTSAP10619 480 aa7.01□□□□□ -1.29
CLCN3-202ENST00000360642 PEPDP12955 493 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms