RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 NFATC4Q14934 902 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 SMAD2Q15796 467 aaKnown RBP4.85□□□□□ -1.63
ATXN3-202ENST00000359366 NKG7Q16617 165 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 HIST2H2ACQ16777 129 aaPredicted RBP4.85□□□□□ -1.63
ATXN3-202ENST00000359366 MPEG1Q2M385 716 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 FBXO43Q4G163 708 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 PRRT3Q5FWE3 981 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 LCE2CQ5TA81 110 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 METTL11BQ5VVY1 283 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 KIAA1614Q5VZ46 1190 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 ANKRD34AQ69YU3 496 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 HIST2H2AA3Q6FI13 130 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 PRMT9Q6P2P2 845 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 USP30Q70CQ3 517 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 ZNF438Q7Z4V0 828 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 NRROSQ86YC3 692 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 PDSS2Q86YH6 399 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 ADGRG5Q8IZF4 528 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 ADGRF3Q8IZF5 1079 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 TSTD1Q8NFU3 115 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 OR2T12Q8NG77 320 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 OR2A1Q8NGT9 310 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 LILRB4Q8NHJ6 448 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 SMPDL3AQ92484 453 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 NCLNQ969V3 563 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 INTS12Q96CB8 462 aaKnown RBP4.85□□□□□ -1.63
ATXN3-202ENST00000359366 C11orf24Q96F05 449 aaPredicted RBP4.85□□□□□ -1.63
ATXN3-202ENST00000359366 RNF145Q96MT1 663 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 WDR92Q96MX6 357 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 GUCD1Q96NT3 240 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 C17orf62Q9BQA9 187 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 DPH7Q9BTV6 452 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 EFCAB11Q9BUY7 163 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 MIR1-1HGQ9H1L0 117 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 COQ10BQ9H8M1 238 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 DIABLOQ9NR28 239 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 FBXL21Q9UKT6 434 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 ACSL5Q9ULC5 683 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 RUVBL1Q9Y265 456 aaKnown RBP4.85□□□□□ -1.63
ATXN3-202ENST00000359366 DTNAQ9Y4J8 743 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 PI4KAP42356 2102 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 FREM2Q5SZK8 3169 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 A0A1W2PS29 197 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 TCRBV5S2A0A599 114 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 ANKDD1BA6NHY2 528 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 AGRPO00253 132 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 SCAMP2O15127 329 aaKnown RBP4.85□□□□□ -1.63
ATXN3-202ENST00000359366 GSTA4O15217 222 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 CASC3O15234 703 aaKnown RBP4.85□□□□□ -1.63
ATXN3-202ENST00000359366 PEX1O43933 1283 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 SCN2BO60939 215 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 MYO1DO94832 1006 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 C6orf47O95873 294 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 C9P02748 559 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 ACPPP15309 386 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 PRPH2P23942 346 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 MAPK1P28482 360 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 BCL6P41182 706 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 RAB28P51157 221 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 CCR8P51685 355 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 RPS26P62854 115 aaKnown RBP4.85□□□□□ -1.63
ATXN3-202ENST00000359366 CSNK1G2P78368 415 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 RELQ04864 619 aaPredicted RBP4.85□□□□□ -1.63
ATXN3-202ENST00000359366 C2orf80Q0P641 193 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 FZD5Q13467 585 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 LRRC32Q14392 662 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 PLCL1Q15111 1095 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 CYP2A13Q16696 494 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 ZNF750Q32MQ0 723 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 RUNDC3AQ59EK9 446 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 COQ5Q5HYK3 327 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 PAGE2BQ5JRK9 111 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 COX20Q5RI15 118 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.85□□□□□ -1.63
ATXN3-202ENST00000359366 ARMC4Q5T2S8 1044 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 CCNJQ5T5M9 372 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 CPTPQ5TA50 214 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 OGFRL1Q5TC84 451 aaPredicted RBP4.85□□□□□ -1.63
ATXN3-202ENST00000359366 NIPAL1Q6NVV3 410 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 KLHL35Q6PF15 583 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 LCTLQ6UWM7 567 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 RFPL4BQ6ZWI9 263 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 VASH1Q7L8A9 365 aaPredicted RBP4.85□□□□□ -1.63
ATXN3-202ENST00000359366 CLVS1Q8IUQ0 354 aaPredicted RBP4.85□□□□□ -1.63
ATXN3-202ENST00000359366 KLHDC8AQ8IYD2 350 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 LAS2Q8IYD9 372 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 TMEFF1Q8IYR6 380 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 ZNF548Q8NEK5 533 aaPredicted RBP4.85□□□□□ -1.63
ATXN3-202ENST00000359366 NETO1Q8TDF5 533 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 DOK4Q8TEW6 326 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 C16orf78Q8WTQ4 265 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 TSPEARQ8WU66 669 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 LCN9Q8WX39 176 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 TBC1D20Q96BZ9 403 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 OTUB1Q96FW1 271 aaPredicted RBP4.85□□□□□ -1.63
ATXN3-202ENST00000359366 SECISBP2Q96T21 854 aaKnown RBP4.85□□□□□ -1.63
ATXN3-202ENST00000359366 TUBA1CQ9BQE3 449 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 CPPED1Q9BRF8 314 aaPredicted RBP4.85□□□□□ -1.63
ATXN3-202ENST00000359366 TIMM29Q9BSF4 260 aa4.85□□□□□ -1.63
ATXN3-202ENST00000359366 DUSP26Q9BV47 211 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms