RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 ST14Q9Y5Y6 855 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 STRCQ7RTU9 1775 aa11.3□□□□□ -0.6
COL9A1-202ENST00000357250 TNFRSF10BO14763 440 aa11.3□□□□□ -0.6
COL9A1-202ENST00000357250 SCAMP1O15126 338 aa11.3□□□□□ -0.6
COL9A1-202ENST00000357250 FLRT2O43155 660 aa11.3□□□□□ -0.6
COL9A1-202ENST00000357250 EMC8O43402 210 aa11.3□□□□□ -0.6
COL9A1-202ENST00000357250 PRKYO43930 277 aa11.3□□□□□ -0.6
COL9A1-202ENST00000357250 ZNF821O75541 412 aaPredicted RBP11.3□□□□□ -0.6
COL9A1-202ENST00000357250 APBB3O95704 486 aa11.3□□□□□ -0.6
COL9A1-202ENST00000357250 RPS3P23396 243 aaKnown RBP eCLIP11.3□□□□□ -0.6
COL9A1-202ENST00000357250 STOMP27105 288 aa11.3□□□□□ -0.6
COL9A1-202ENST00000357250 POU4F2Q12837 409 aa11.3□□□□□ -0.6
COL9A1-202ENST00000357250 SLC10A2Q12908 348 aaPredicted RBP11.3□□□□□ -0.6
COL9A1-202ENST00000357250 ELAVL3Q14576 367 aaKnown RBP11.3□□□□□ -0.6
COL9A1-202ENST00000357250 CARTPTQ16568 116 aa11.3□□□□□ -0.6
COL9A1-202ENST00000357250 CDHR3Q6ZTQ4 885 aa11.3□□□□□ -0.6
COL9A1-202ENST00000357250 SLC44A3Q8N4M1 653 aa11.3□□□□□ -0.6
COL9A1-202ENST00000357250 TCEANCQ8N8B7 351 aa11.3□□□□□ -0.6
COL9A1-202ENST00000357250 SUN3Q8TAQ9 357 aa11.3□□□□□ -0.6
COL9A1-202ENST00000357250 ADAMTS18Q8TE60 1221 aa11.3□□□□□ -0.6
COL9A1-202ENST00000357250 HMGB4Q8WW32 186 aa11.3□□□□□ -0.6
COL9A1-202ENST00000357250 TMEM234Q8WY98 164 aa11.3□□□□□ -0.6
COL9A1-202ENST00000357250 ISOC1Q96CN7 298 aa11.3□□□□□ -0.6
COL9A1-202ENST00000357250 SLC25A36Q96CQ1 311 aa11.3□□□□□ -0.6
COL9A1-202ENST00000357250 ZNF689Q96CS4 500 aaPredicted RBP11.3□□□□□ -0.6
COL9A1-202ENST00000357250 OR2M4Q96R27 311 aa11.3□□□□□ -0.6
COL9A1-202ENST00000357250 FBRSQ9HAH7 460 aa11.3□□□□□ -0.6
COL9A1-202ENST00000357250 A0A075B6Q4 140 aa11.3□□□□□ -0.6
COL9A1-202ENST00000357250 HYKKA2RU49 373 aa11.3□□□□□ -0.6
COL9A1-202ENST00000357250 C2orf74A8MZ97 194 aa11.3□□□□□ -0.6
COL9A1-202ENST00000357250 PROM1O43490 865 aa11.3□□□□□ -0.6
COL9A1-202ENST00000357250 IL3P08700 152 aa11.3□□□□□ -0.6
COL9A1-202ENST00000357250 CHRM5P08912 532 aaPredicted RBP11.3□□□□□ -0.6
COL9A1-202ENST00000357250 MAZP56270 477 aaKnown RBP11.3□□□□□ -0.6
COL9A1-202ENST00000357250 CD47Q08722 323 aa11.3□□□□□ -0.6
COL9A1-202ENST00000357250 PTGR1Q14914 329 aa11.3□□□□□ -0.6
COL9A1-202ENST00000357250 KANK2Q63ZY3 851 aa11.3□□□□□ -0.6
COL9A1-202ENST00000357250 SLC7A6OSQ96CW6 309 aaPredicted RBP11.3□□□□□ -0.6
COL9A1-202ENST00000357250 MUS81Q96NY9 551 aa11.3□□□□□ -0.6
COL9A1-202ENST00000357250 FAM129BQ96TA1 746 aa11.3□□□□□ -0.6
COL9A1-202ENST00000357250 PCDH10Q9P2E7 1040 aa11.3□□□□□ -0.6
COL9A1-202ENST00000357250 SERTAD3Q9UJW9 196 aa11.3□□□□□ -0.6
COL9A1-202ENST00000357250 TMEM14AQ9Y6G1 99 aa11.3□□□□□ -0.6
COL9A1-202ENST00000357250 SH3PXD2BA1X283 911 aa11.3□□□□□ -0.6
COL9A1-202ENST00000357250 PGAM2P15259 253 aa11.3□□□□□ -0.6
COL9A1-202ENST00000357250 AGTR2P50052 363 aa11.3□□□□□ -0.6
COL9A1-202ENST00000357250 GINS1Q14691 196 aa11.3□□□□□ -0.6
COL9A1-202ENST00000357250 PTPRCAPQ14761 206 aa11.3□□□□□ -0.6
COL9A1-202ENST00000357250 SLC14A2Q15849 920 aa11.3□□□□□ -0.6
COL9A1-202ENST00000357250 CARM1Q86X55 608 aa11.3□□□□□ -0.6
COL9A1-202ENST00000357250 SPAG16Q8N0X2 631 aa11.3□□□□□ -0.6
COL9A1-202ENST00000357250 OR4C15Q8NGM1 316 aa11.3□□□□□ -0.6
COL9A1-202ENST00000357250 LRRC20Q8TCA0 184 aa11.3□□□□□ -0.6
COL9A1-202ENST00000357250 MS4A4AQ96JQ5 239 aa11.3□□□□□ -0.6
COL9A1-202ENST00000357250 WDR37Q9Y2I8 494 aa11.3□□□□□ -0.6
COL9A1-202ENST00000357250 LAMA4Q16363 1823 aa11.3□□□□□ -0.6
COL9A1-202ENST00000357250 A0A1W2PPW3 197 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 FGF4P08620 206 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 GMPRP36959 345 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 RAB8AP61006 207 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 ZNF252P-AS1Q0IIN9 211 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 LMAN2Q12907 356 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 CEACAM7Q14002 265 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 NFE2L1Q14494 772 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 ZNF181Q2M3W8 571 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 ZNF613Q6PF04 617 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 RANBP10Q6VN20 620 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 ZNF627Q7L945 461 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 AMIGO1Q86WK6 493 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 CEP97Q8IW35 865 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 OR4E2Q8NGC2 313 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 PTGES2Q9H7Z7 377 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 WDR6Q9NNW5 1121 aaKnown RBP11.29□□□□□ -0.6
COL9A1-202ENST00000357250 SCP2D1Q9UJQ7 156 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 OR2AT4A6NND4 320 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 B4DGG1 531 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 J3QLW9 94 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 PTGESO14684 152 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 UGDHO60701 494 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 CCL5P13501 91 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 ZNF19P17023 458 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 PVALBP20472 110 aaPredicted RBP11.29□□□□□ -0.6
COL9A1-202ENST00000357250 CTSOP43234 321 aaPredicted RBP11.29□□□□□ -0.6
COL9A1-202ENST00000357250 DGKEP52429 567 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 CAPZA1P52907 286 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 UBXN2BQ14CS0 331 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 TBC1D25Q3MII6 688 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 LRIF1Q5T3J3 769 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 KCTD18Q6PI47 426 aaPredicted RBP11.29□□□□□ -0.6
COL9A1-202ENST00000357250 MRPL10Q7Z7H8 261 aaKnown RBP11.29□□□□□ -0.6
COL9A1-202ENST00000357250 SLC22A16Q86VW1 577 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 ZNF440Q8IYI8 595 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 CBARPQ8N350 705 aaPredicted RBP11.29□□□□□ -0.6
COL9A1-202ENST00000357250 OR2T33Q8NG76 320 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 OR4K17Q8NGC6 315 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 GPR150Q8NGU9 434 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.29□□□□□ -0.6
COL9A1-202ENST00000357250 IGSF8Q969P0 613 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 METTL2AQ96IZ6 378 aaKnown RBP11.29□□□□□ -0.6
COL9A1-202ENST00000357250 ZIC5Q96T25 663 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms