RNA–Protein interactions for RNA: ENST00000355653.7

VAT1-201, Transcript of vesicle amine transport 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAT1, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-201ENST00000355653 COMMD3Q9UBI1 195 aa14.58□□□□□ -0.07
VAT1-201ENST00000355653 SATB2Q9UPW6 733 aa14.58□□□□□ -0.07
VAT1-201ENST00000355653 YARS2Q9Y2Z4 477 aaKnown RBP14.58□□□□□ -0.07
VAT1-201ENST00000355653 Q9Y3F1 56 aa14.58□□□□□ -0.07
VAT1-201ENST00000355653 CCDC88CQ9P219 2028 aa14.58□□□□□ -0.08
VAT1-201ENST00000355653 SLC35F4A4IF30 521 aa14.58□□□□□ -0.08
VAT1-201ENST00000355653 TPST2O60704 377 aa14.58□□□□□ -0.08
VAT1-201ENST00000355653 APEX1P27695 318 aaKnown RBP14.58□□□□□ -0.08
VAT1-201ENST00000355653 SDC2P34741 201 aa14.58□□□□□ -0.08
VAT1-201ENST00000355653 TUFMP49411 452 aaKnown RBP14.58□□□□□ -0.08
VAT1-201ENST00000355653 RAB25P57735 213 aa14.58□□□□□ -0.08
VAT1-201ENST00000355653 BNC1Q01954 994 aa14.58□□□□□ -0.08
VAT1-201ENST00000355653 C1DQ13901 141 aaKnown RBP14.58□□□□□ -0.08
VAT1-201ENST00000355653 TRIQKQ629K1 86 aa14.58□□□□□ -0.08
VAT1-201ENST00000355653 SDE2Q6IQ49 451 aa14.58□□□□□ -0.08
VAT1-201ENST00000355653 USP30Q70CQ3 517 aa14.58□□□□□ -0.08
VAT1-201ENST00000355653 TCTE3Q8IZS6 198 aa14.58□□□□□ -0.08
VAT1-201ENST00000355653 GPR26Q8NDV2 337 aa14.58□□□□□ -0.08
VAT1-201ENST00000355653 C19orf18Q8NEA5 215 aa14.58□□□□□ -0.08
VAT1-201ENST00000355653 OR4M1Q8NGD0 313 aa14.58□□□□□ -0.08
VAT1-201ENST00000355653 GEMIN6Q8WXD5 167 aaKnown RBP14.58□□□□□ -0.08
VAT1-201ENST00000355653 WBP2Q969T9 261 aa14.58□□□□□ -0.08
VAT1-201ENST00000355653 MED8Q96G25 268 aa14.58□□□□□ -0.08
VAT1-201ENST00000355653 NELL2Q99435 816 aa14.58□□□□□ -0.08
VAT1-201ENST00000355653 SLC12A9Q9BXP2 914 aa14.58□□□□□ -0.08
VAT1-201ENST00000355653 NLKQ9UBE8 527 aa14.58□□□□□ -0.08
VAT1-201ENST00000355653 BTNL2Q9UIR0 455 aa14.58□□□□□ -0.08
VAT1-201ENST00000355653 PRELID1Q9Y255 219 aa14.58□□□□□ -0.08
VAT1-201ENST00000355653 TRBV5-4A0A0C4DH59 114 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 BNIP3LO60238 219 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 C6orf47O95873 294 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 CYP2A6P11509 494 aaPredicted RBP14.57□□□□□ -0.08
VAT1-201ENST00000355653 AKR1A1P14550 325 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 XCR1P46094 333 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 ALDH9A1P49189 494 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 MAN2A2P49641 1150 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 CYP4F8P98187 520 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 BCL2L1Q07817 233 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 ZNF385BQ569K4 471 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 RSPO2Q6UXX9 243 aaPredicted RBP14.57□□□□□ -0.08
VAT1-201ENST00000355653 GDPGP1Q6ZNW5 385 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 AMIGO1Q86WK6 493 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 CELF5Q8N6W0 485 aaKnown RBP14.57□□□□□ -0.08
VAT1-201ENST00000355653 GDPD1Q8N9F7 314 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 SYT14Q8NB59 555 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 BTN2A2Q8WVV5 523 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 FAM193BQ96PV7 902 aaPredicted RBP14.57□□□□□ -0.08
VAT1-201ENST00000355653 TRIM45Q9H8W5 580 aaPredicted RBP14.57□□□□□ -0.08
VAT1-201ENST00000355653 MCUBQ9NWR8 336 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 ZNF282Q9UDV7 671 aaPredicted RBP14.57□□□□□ -0.08
VAT1-201ENST00000355653 PLEKHB1Q9UF11 243 aaPredicted RBP14.57□□□□□ -0.08
VAT1-201ENST00000355653 SPEF1Q9Y4P9 236 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 ALPK3Q96L96 1907 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 TRBC2A0A5B9 178 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 POLR1CO15160 346 aaPredicted RBP14.57□□□□□ -0.08
VAT1-201ENST00000355653 APOL3O95236 402 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 C1SP09871 688 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 MSL3P1P0C860 447 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 SLC2A2P11168 524 aaPredicted RBP14.57□□□□□ -0.08
VAT1-201ENST00000355653 ALAS2P22557 587 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 WEE1P30291 646 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 CHI3L1P36222 383 aaPredicted RBP14.57□□□□□ -0.08
VAT1-201ENST00000355653 MAP2K3P46734 347 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 UBE3AQ05086 875 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 CCDC85BQ15834 202 aaPredicted RBP14.57□□□□□ -0.08
VAT1-201ENST00000355653 ANXA8L1Q5VT79 327 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 CIDECQ96AQ7 238 aaPredicted RBP14.57□□□□□ -0.08
VAT1-201ENST00000355653 HDHD5Q9BXW7 423 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 TMEM245Q9H330 911 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 SLC25A19Q9HC21 320 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 THSD1Q9NS62 852 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 TMCC3Q9ULS5 477 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 TRBV4-1A0A0J9YWV2 114 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 SLC38A8A6NNN8 435 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 SMAD6O43541 496 aaKnown RBP14.57□□□□□ -0.08
VAT1-201ENST00000355653 TBL1XO60907 577 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 MTX2O75431 263 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 TNFRSF21O75509 655 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 PDE9AO76083 593 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 CBSLP0DN79 551 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 PIPP12273 146 aaPredicted RBP14.57□□□□□ -0.08
VAT1-201ENST00000355653 IDSP22304 550 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 CPN2P22792 545 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 CBSP35520 551 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 SOAT1P35610 550 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 MVDP53602 400 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 PFN3P60673 137 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 RAE1P78406 368 aaKnown RBP14.57□□□□□ -0.08
VAT1-201ENST00000355653 CDK6Q00534 326 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 B4GALNT1Q00973 533 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 ZNF91Q05481 1191 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 DOC2AQ14183 400 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 ATP13A5Q4VNC0 1218 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 LYPLAL1Q5VWZ2 237 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 CASP12Q6UXS9 341 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 RFLNAQ6ZTI6 216 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 PLCZ1Q86YW0 608 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 LAS2Q8IYD9 372 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 NATD1Q8N6N6 113 aa14.57□□□□□ -0.08
VAT1-201ENST00000355653 TCEANCQ8N8B7 351 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms