RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 MIEF2Q96C03 454 aa14.79□□□□□ -0.04
CTSA-202ENST00000354880 SLC41A2Q96JW4 573 aa14.79□□□□□ -0.04
CTSA-202ENST00000354880 NANOGQ9H9S0 305 aa14.79□□□□□ -0.04
CTSA-202ENST00000354880 VAPAQ9P0L0 249 aa14.79□□□□□ -0.04
CTSA-202ENST00000354880 ABCD2Q9UBJ2 740 aa14.79□□□□□ -0.04
CTSA-202ENST00000354880 BTNL2Q9UIR0 455 aa14.79□□□□□ -0.04
CTSA-202ENST00000354880 PACSIN3Q9UKS6 424 aa14.79□□□□□ -0.04
CTSA-202ENST00000354880 FBXW2Q9UKT8 454 aa14.79□□□□□ -0.04
CTSA-202ENST00000354880 ATG4BQ9Y4P1 393 aa14.79□□□□□ -0.04
CTSA-202ENST00000354880 RNASET2O00584 256 aaKnown RBP14.78□□□□□ -0.04
CTSA-202ENST00000354880 FLRT2O43155 660 aa14.78□□□□□ -0.04
CTSA-202ENST00000354880 B3GALT2O43825 422 aa14.78□□□□□ -0.04
CTSA-202ENST00000354880 CIB2O75838 187 aa14.78□□□□□ -0.04
CTSA-202ENST00000354880 IL1RNP18510 177 aa14.78□□□□□ -0.04
CTSA-202ENST00000354880 TRPC1P48995 793 aa14.78□□□□□ -0.04
CTSA-202ENST00000354880 TCF15Q12870 199 aa14.78□□□□□ -0.04
CTSA-202ENST00000354880 CEACAM7Q14002 265 aa14.78□□□□□ -0.04
CTSA-202ENST00000354880 SF3A2Q15428 464 aaKnown RBP14.78□□□□□ -0.04
CTSA-202ENST00000354880 LRIF1Q5T3J3 769 aa14.78□□□□□ -0.04
CTSA-202ENST00000354880 DNAJC14Q6Y2X3 702 aaPredicted RBP14.78□□□□□ -0.04
CTSA-202ENST00000354880 ZNF574Q6ZN55 896 aaPredicted RBP14.78□□□□□ -0.04
CTSA-202ENST00000354880 TMPRSS9Q7Z410 1059 aa14.78□□□□□ -0.04
CTSA-202ENST00000354880 SLC15A3Q8IY34 581 aa14.78□□□□□ -0.04
CTSA-202ENST00000354880 ARHGEF39Q8N4T4 335 aa14.78□□□□□ -0.04
CTSA-202ENST00000354880 RNF148Q8N7C7 305 aa14.78□□□□□ -0.04
CTSA-202ENST00000354880 KLHL6Q8WZ60 621 aa14.78□□□□□ -0.04
CTSA-202ENST00000354880 CCDC124Q96CT7 223 aaKnown RBP14.78□□□□□ -0.04
CTSA-202ENST00000354880 ZNF764Q96H86 408 aaPredicted RBP14.78□□□□□ -0.04
CTSA-202ENST00000354880 CCDC115Q96NT0 180 aa14.78□□□□□ -0.04
CTSA-202ENST00000354880 PANX1Q96RD7 426 aa14.78□□□□□ -0.04
CTSA-202ENST00000354880 PRRX2Q99811 253 aa14.78□□□□□ -0.04
CTSA-202ENST00000354880 DPYSL5Q9BPU6 564 aa14.78□□□□□ -0.04
CTSA-202ENST00000354880 MAPKAP1Q9BPZ7 522 aa14.78□□□□□ -0.04
CTSA-202ENST00000354880 INPP5KQ9BT40 448 aa14.78□□□□□ -0.04
CTSA-202ENST00000354880 PAIP1Q9H074 479 aaKnown RBP14.78□□□□□ -0.04
CTSA-202ENST00000354880 ZNF768Q9H5H4 540 aaKnown RBP14.78□□□□□ -0.04
CTSA-202ENST00000354880 EHD3Q9NZN3 535 aa14.78□□□□□ -0.04
CTSA-202ENST00000354880 PCDHB14Q9Y5E9 798 aa14.78□□□□□ -0.04
CTSA-202ENST00000354880 PCDHA9Q9Y5H5 950 aa14.78□□□□□ -0.04
CTSA-202ENST00000354880 A0A1W2PR48 441 aa14.78□□□□□ -0.04
CTSA-202ENST00000354880 A8MUI8 341 aa14.78□□□□□ -0.04
CTSA-202ENST00000354880 PROM1O43490 865 aa14.78□□□□□ -0.04
CTSA-202ENST00000354880 SORBS2O94875 1100 aaKnown RBP14.78□□□□□ -0.04
CTSA-202ENST00000354880 ANP32DO95626 131 aa14.78□□□□□ -0.04
CTSA-202ENST00000354880 NELFEP18615 380 aaKnown RBP14.78□□□□□ -0.04
CTSA-202ENST00000354880 EFNA1P20827 205 aaPredicted RBP14.78□□□□□ -0.04
CTSA-202ENST00000354880 CDKN2CP42773 168 aa14.78□□□□□ -0.04
CTSA-202ENST00000354880 HNRNPFP52597 415 aaKnown RBP14.78□□□□□ -0.04
CTSA-202ENST00000354880 KCNAB1Q14722 419 aa14.78□□□□□ -0.04
CTSA-202ENST00000354880 MPEG1Q2M385 716 aa14.78□□□□□ -0.04
CTSA-202ENST00000354880 MUM1Q2TAK8 710 aa14.78□□□□□ -0.04
CTSA-202ENST00000354880 SAMD4BQ5PRF9 694 aaKnown RBP14.78□□□□□ -0.04
CTSA-202ENST00000354880 TMTC4Q5T4D3 741 aa14.78□□□□□ -0.04
CTSA-202ENST00000354880 PRSS41Q7RTY9 318 aa14.78□□□□□ -0.04
CTSA-202ENST00000354880 CLECL1Q8IZS7 167 aa14.78□□□□□ -0.04
CTSA-202ENST00000354880 NATD1Q8N6N6 113 aa14.78□□□□□ -0.04
CTSA-202ENST00000354880 FAM47BQ8NA70 645 aa14.78□□□□□ -0.04
CTSA-202ENST00000354880 OR4D9Q8NGE8 314 aa14.78□□□□□ -0.04
CTSA-202ENST00000354880 RHBDD1Q8TEB9 315 aa14.78□□□□□ -0.04
CTSA-202ENST00000354880 TMEM125Q96AQ2 219 aa14.78□□□□□ -0.04
CTSA-202ENST00000354880 CIDECQ96AQ7 238 aaPredicted RBP14.78□□□□□ -0.04
CTSA-202ENST00000354880 CNDP2Q96KP4 475 aaKnown RBP14.78□□□□□ -0.04
CTSA-202ENST00000354880 ANKRD27Q96NW4 1050 aa14.78□□□□□ -0.04
CTSA-202ENST00000354880 LRFN3Q9BTN0 628 aa14.78□□□□□ -0.04
CTSA-202ENST00000354880 SYNDIG1Q9H7V2 258 aa14.78□□□□□ -0.04
CTSA-202ENST00000354880 IRAK4Q9NWZ3 460 aa14.78□□□□□ -0.04
CTSA-202ENST00000354880 CMTM6Q9NX76 183 aa14.78□□□□□ -0.04
CTSA-202ENST00000354880 TAS2R7Q9NYW3 318 aa14.78□□□□□ -0.04
CTSA-202ENST00000354880 SLC25A37Q9NYZ2 338 aa14.78□□□□□ -0.04
CTSA-202ENST00000354880 NAALAD2Q9Y3Q0 740 aa14.78□□□□□ -0.04
CTSA-202ENST00000354880 L3MBTL1Q9Y468 752 aa14.78□□□□□ -0.04
CTSA-202ENST00000354880 NEUROG3Q9Y4Z2 214 aa14.78□□□□□ -0.04
CTSA-202ENST00000354880 TRBV5-3A0A0A0MS03 114 aa14.77□□□□□ -0.05
CTSA-202ENST00000354880 C1orf226A1L170 272 aa14.77□□□□□ -0.05
CTSA-202ENST00000354880 PRORSD1PA6NEY8 169 aa14.77□□□□□ -0.05
CTSA-202ENST00000354880 NME4O00746 187 aa14.77□□□□□ -0.05
CTSA-202ENST00000354880 CDX4O14627 284 aaPredicted RBP14.77□□□□□ -0.05
CTSA-202ENST00000354880 GALR3O60755 368 aaPredicted RBP14.77□□□□□ -0.05
CTSA-202ENST00000354880 CPSF4O95639 269 aaKnown RBP14.77□□□□□ -0.05
CTSA-202ENST00000354880 LDOC1O95751 146 aaPredicted RBP14.77□□□□□ -0.05
CTSA-202ENST00000354880 AIFM1O95831 613 aa14.77□□□□□ -0.05
CTSA-202ENST00000354880 CKMT2P17540 419 aa14.77□□□□□ -0.05
CTSA-202ENST00000354880 ME2P23368 584 aa14.77□□□□□ -0.05
CTSA-202ENST00000354880 PTPN6P29350 595 aa14.77□□□□□ -0.05
CTSA-202ENST00000354880 NDUFA9Q16795 377 aa14.77□□□□□ -0.05
CTSA-202ENST00000354880 PRSS53Q2L4Q9 553 aa14.77□□□□□ -0.05
CTSA-202ENST00000354880 RABL3Q5HYI8 236 aa14.77□□□□□ -0.05
CTSA-202ENST00000354880 PDSS2Q86YH6 399 aa14.77□□□□□ -0.05
CTSA-202ENST00000354880 MSRB3Q8IXL7 192 aa14.77□□□□□ -0.05
CTSA-202ENST00000354880 OR8J3Q8NGG0 315 aa14.77□□□□□ -0.05
CTSA-202ENST00000354880 GBP5Q96PP8 586 aa14.77□□□□□ -0.05
CTSA-202ENST00000354880 TRIM8Q9BZR9 551 aa14.77□□□□□ -0.05
CTSA-202ENST00000354880 DENND2DQ9H6A0 471 aaPredicted RBP14.77□□□□□ -0.05
CTSA-202ENST00000354880 ANKHQ9HCJ1 492 aa14.77□□□□□ -0.05
CTSA-202ENST00000354880 SLC6A13Q9NSD5 602 aa14.77□□□□□ -0.05
CTSA-202ENST00000354880 KCMF1Q9P0J7 381 aa14.77□□□□□ -0.05
CTSA-202ENST00000354880 C5AR2Q9P296 337 aa14.77□□□□□ -0.05
CTSA-202ENST00000354880 PDP2Q9P2J9 529 aa14.77□□□□□ -0.05
CTSA-202ENST00000354880 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.77□□□□□ -0.05
CTSA-202ENST00000354880 CD300AQ9UGN4 299 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms