RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 ATP5F1P24539 256 aaPredicted RBP9.68□□□□□ -0.86
SYNE1-203ENST00000354674 AKT1P31749 480 aa9.68□□□□□ -0.86
SYNE1-203ENST00000354674 AP2S1P53680 142 aaPredicted RBP9.68□□□□□ -0.86
SYNE1-203ENST00000354674 DEFA1P59665 94 aa9.68□□□□□ -0.86
SYNE1-203ENST00000354674 DEFA3P59666 94 aa9.68□□□□□ -0.86
SYNE1-203ENST00000354674 ZNF404Q494X3 552 aa9.68□□□□□ -0.86
SYNE1-203ENST00000354674 SAMD4BQ5PRF9 694 aaKnown RBP9.68□□□□□ -0.86
SYNE1-203ENST00000354674 PLEKHS1Q5SXH7 462 aa9.68□□□□□ -0.86
SYNE1-203ENST00000354674 ZNF648Q5T619 568 aaPredicted RBP9.68□□□□□ -0.86
SYNE1-203ENST00000354674 RAB43Q86YS6 212 aa9.68□□□□□ -0.86
SYNE1-203ENST00000354674 OR6C4Q8NGE1 309 aa9.68□□□□□ -0.86
SYNE1-203ENST00000354674 LINGO1Q96FE5 620 aa9.68□□□□□ -0.86
SYNE1-203ENST00000354674 CEP19Q96LK0 163 aa9.68□□□□□ -0.86
SYNE1-203ENST00000354674 LINC00615Q96LM1 132 aaPredicted RBP9.68□□□□□ -0.86
SYNE1-203ENST00000354674 SLC17A9Q9BYT1 436 aa9.68□□□□□ -0.86
SYNE1-203ENST00000354674 KCNN2Q9H2S1 579 aa9.68□□□□□ -0.86
SYNE1-203ENST00000354674 RIBC2Q9H4K1 309 aa9.68□□□□□ -0.86
SYNE1-203ENST00000354674 ALG9Q9H6U8 611 aa9.68□□□□□ -0.86
SYNE1-203ENST00000354674 SGK2Q9HBY8 427 aa9.68□□□□□ -0.86
SYNE1-203ENST00000354674 CD93Q9NPY3 652 aa9.68□□□□□ -0.86
SYNE1-203ENST00000354674 MBNL1Q9NR56 388 aaKnown RBP9.68□□□□□ -0.86
SYNE1-203ENST00000354674 C2orf42Q9NWW7 574 aa9.68□□□□□ -0.86
SYNE1-203ENST00000354674 UTS2RQ9UKP6 389 aa9.68□□□□□ -0.86
SYNE1-203ENST00000354674 A0A1W2PQU0 124 aa9.68□□□□□ -0.86
SYNE1-203ENST00000354674 GNGT2O14610 69 aa9.68□□□□□ -0.86
SYNE1-203ENST00000354674 KPNA5O15131 536 aa9.68□□□□□ -0.86
SYNE1-203ENST00000354674 ARPC2O15144 300 aa9.68□□□□□ -0.86
SYNE1-203ENST00000354674 VEGFDO43915 354 aa9.68□□□□□ -0.86
SYNE1-203ENST00000354674 IRF4Q15306 451 aa9.68□□□□□ -0.86
SYNE1-203ENST00000354674 RASGRP3Q8IV61 690 aa9.68□□□□□ -0.86
SYNE1-203ENST00000354674 CHDHQ8NE62 594 aaPredicted RBP9.68□□□□□ -0.86
SYNE1-203ENST00000354674 STAG3L4Q8TBR4 150 aa9.68□□□□□ -0.86
SYNE1-203ENST00000354674 GANCQ8TET4 914 aa9.68□□□□□ -0.86
SYNE1-203ENST00000354674 FUBP1Q96AE4 644 aaKnown RBP9.68□□□□□ -0.86
SYNE1-203ENST00000354674 PYCR2Q96C36 320 aa9.68□□□□□ -0.86
SYNE1-203ENST00000354674 CCDC126Q96EE4 140 aa9.68□□□□□ -0.86
SYNE1-203ENST00000354674 PIP5K1AQ99755 562 aa9.68□□□□□ -0.86
SYNE1-203ENST00000354674 CHRDQ9H2X0 955 aa9.68□□□□□ -0.86
SYNE1-203ENST00000354674 FBXO8Q9NRD0 319 aa9.68□□□□□ -0.86
SYNE1-203ENST00000354674 DIMT1Q9UNQ2 313 aaKnown RBP9.68□□□□□ -0.86
SYNE1-203ENST00000354674 GPR34Q9UPC5 381 aa9.68□□□□□ -0.86
SYNE1-203ENST00000354674 PCDHGB6Q9Y5F9 930 aa9.68□□□□□ -0.86
SYNE1-203ENST00000354674 TRIOO75962 3097 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 FAM170BA6NMN3 283 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 UBDO15205 165 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 TNNI3P19429 210 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 SSTR4P31391 388 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 CTSCP53634 463 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 PPP2CBP62714 309 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 PPP2CAP67775 309 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 HOXC5Q00444 222 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 CDK3Q00526 305 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 STX5Q13190 355 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 INTS11Q5TA45 600 aaKnown RBP9.67□□□□□ -0.86
SYNE1-203ENST00000354674 SPESP1Q6UW49 350 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 CLHC1Q8NHS4 586 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 NUDT8Q8WV74 236 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 TMBIM1Q969X1 311 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 FOXQ1Q9C009 403 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 ZCCHC2Q9C0B9 1178 aaKnown RBP9.67□□□□□ -0.86
SYNE1-203ENST00000354674 PPIL3Q9H2H8 161 aaKnown RBP9.67□□□□□ -0.86
SYNE1-203ENST00000354674 SARS2Q9NP81 518 aaKnown RBP9.67□□□□□ -0.86
SYNE1-203ENST00000354674 FBXL21Q9UKT6 434 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 A8MT66 165 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 CDC7O00311 574 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 SHOXO15266 292 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 SLCO2B1O94956 709 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 SNRPB2P08579 225 aaKnown RBP9.67□□□□□ -0.86
SYNE1-203ENST00000354674 HOXC4P09017 264 aaPredicted RBP9.67□□□□□ -0.86
SYNE1-203ENST00000354674 SLC15A1P46059 708 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 TGM4P49221 684 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 ABATP80404 500 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 TARDBPQ13148 414 aaKnown RBP eCLIP9.67□□□□□ -0.86
SYNE1-203ENST00000354674 DSG2Q14126 1118 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 TTLL9Q3SXZ7 439 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 GPAT3Q53EU6 434 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 FBXO48Q5FWF7 155 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 DET1Q7L5Y6 550 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 SLC22A9Q8IVM8 553 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 EXT2Q93063 718 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 MUL1Q969V5 352 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 PHF21BQ96EK2 531 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 L3HYPDHQ96EM0 354 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 ZNF514Q96K75 400 aaPredicted RBP9.67□□□□□ -0.86
SYNE1-203ENST00000354674 CCM2Q9BSQ5 444 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 WACQ9BTA9 647 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 SLAMF8Q9P0V8 285 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 TBC1D3DA0A087WVF3 549 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 TBC1D3IA0A087WXS9 549 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 TBC1D3EA0A087X179 549 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 TBC1D3KA0A087X1G2 549 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 TBC1D3FA6NER0 549 aaPredicted RBP9.67□□□□□ -0.86
SYNE1-203ENST00000354674 GPR89AB7ZAQ6 455 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 TBC1D3LB9A6J9 549 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 CAPN5O15484 640 aaPredicted RBP9.67□□□□□ -0.86
SYNE1-203ENST00000354674 LATO43561 262 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 PI15O43692 258 aa9.67□□□□□ -0.86
SYNE1-203ENST00000354674 MITFO75030 526 aaPredicted RBP9.67□□□□□ -0.86
SYNE1-203ENST00000354674 IPO13O94829 963 aaKnown RBP9.67□□□□□ -0.86
SYNE1-203ENST00000354674 PTTG1O95997 202 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms