RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 HBA1P69905 142 aa10.92□□□□□ -0.66
CAPN9-202ENST00000354537 COX20Q5RI15 118 aa10.92□□□□□ -0.66
CAPN9-202ENST00000354537 RGMBQ6NW40 437 aa10.92□□□□□ -0.66
CAPN9-202ENST00000354537 PLCZ1Q86YW0 608 aa10.92□□□□□ -0.66
CAPN9-202ENST00000354537 PCSK9Q8NBP7 692 aaKnown RBP10.92□□□□□ -0.66
CAPN9-202ENST00000354537 OR8J1Q8NGP2 316 aa10.92□□□□□ -0.66
CAPN9-202ENST00000354537 CREB3L4Q8TEY5 395 aa10.92□□□□□ -0.66
CAPN9-202ENST00000354537 GTPBP3Q969Y2 492 aaKnown RBP10.92□□□□□ -0.66
CAPN9-202ENST00000354537 ZC3HAV1LQ96H79 300 aaKnown RBP10.92□□□□□ -0.66
CAPN9-202ENST00000354537 CASD1Q96PB1 797 aa10.92□□□□□ -0.66
CAPN9-202ENST00000354537 ROGDIQ9GZN7 287 aa10.92□□□□□ -0.66
CAPN9-202ENST00000354537 REV1Q9UBZ9 1251 aa10.92□□□□□ -0.66
CAPN9-202ENST00000354537 EXO1Q9UQ84 846 aaKnown RBP10.92□□□□□ -0.66
CAPN9-202ENST00000354537 PRAMEF33A0A0G2JMD5 474 aa10.92□□□□□ -0.66
CAPN9-202ENST00000354537 TRBC2A0A5B9 178 aa10.92□□□□□ -0.66
CAPN9-202ENST00000354537 B4DXG7 233 aa10.92□□□□□ -0.66
CAPN9-202ENST00000354537 E7EQ34 232 aa10.92□□□□□ -0.66
CAPN9-202ENST00000354537 PRAMEF10O60809 474 aa10.92□□□□□ -0.66
CAPN9-202ENST00000354537 PDE9AO76083 593 aa10.92□□□□□ -0.66
CAPN9-202ENST00000354537 CHRNB1P11230 501 aa10.92□□□□□ -0.66
CAPN9-202ENST00000354537 TNFRSF1BP20333 461 aa10.92□□□□□ -0.66
CAPN9-202ENST00000354537 ZXDBP98169 803 aa10.92□□□□□ -0.66
CAPN9-202ENST00000354537 ALDH6A1Q02252 535 aaKnown RBP10.92□□□□□ -0.66
CAPN9-202ENST00000354537 ZNF763Q0D2J5 394 aa10.92□□□□□ -0.66
CAPN9-202ENST00000354537 MFSD4BQ5TF39 518 aa10.92□□□□□ -0.66
CAPN9-202ENST00000354537 METAP1DQ6UB28 335 aaPredicted RBP10.92□□□□□ -0.66
CAPN9-202ENST00000354537 Q6ZNB5 142 aa10.92□□□□□ -0.66
CAPN9-202ENST00000354537 APCDD1Q8J025 514 aa10.92□□□□□ -0.66
CAPN9-202ENST00000354537 OR7G3Q8NG95 312 aa10.92□□□□□ -0.66
CAPN9-202ENST00000354537 OR6K2Q8NGY2 324 aa10.92□□□□□ -0.66
CAPN9-202ENST00000354537 OR56A3Q8NH54 315 aa10.92□□□□□ -0.66
CAPN9-202ENST00000354537 WDR34Q96EX3 536 aa10.92□□□□□ -0.66
CAPN9-202ENST00000354537 DHRS1Q96LJ7 313 aa10.92□□□□□ -0.66
CAPN9-202ENST00000354537 BBS2Q9BXC9 721 aa10.92□□□□□ -0.66
CAPN9-202ENST00000354537 CPEB1Q9BZB8 566 aaKnown RBP10.92□□□□□ -0.66
CAPN9-202ENST00000354537 NIPAL2Q9H841 368 aa10.92□□□□□ -0.66
CAPN9-202ENST00000354537 RNF121Q9H920 327 aa10.92□□□□□ -0.66
CAPN9-202ENST00000354537 RC3H2Q9HBD1 1191 aaKnown RBP10.92□□□□□ -0.66
CAPN9-202ENST00000354537 PAQR5Q9NXK6 330 aaPredicted RBP10.92□□□□□ -0.66
CAPN9-202ENST00000354537 GULP1Q9UBP9 304 aa10.92□□□□□ -0.66
CAPN9-202ENST00000354537 TMCC3Q9ULS5 477 aa10.92□□□□□ -0.66
CAPN9-202ENST00000354537 KLHL20Q9Y2M5 609 aa10.92□□□□□ -0.66
CAPN9-202ENST00000354537 A6NL46 340 aa10.91□□□□□ -0.66
CAPN9-202ENST00000354537 UPK3BL1B0FP48 263 aa10.91□□□□□ -0.66
CAPN9-202ENST00000354537 UPK3BL2E5RIL1 263 aa10.91□□□□□ -0.66
CAPN9-202ENST00000354537 ZNF197O14709 1029 aa10.91□□□□□ -0.66
CAPN9-202ENST00000354537 PROM1O43490 865 aa10.91□□□□□ -0.66
CAPN9-202ENST00000354537 GREM1O60565 184 aa10.91□□□□□ -0.66
CAPN9-202ENST00000354537 HCN1O60741 890 aa10.91□□□□□ -0.66
CAPN9-202ENST00000354537 ZNF821O75541 412 aaPredicted RBP10.91□□□□□ -0.66
CAPN9-202ENST00000354537 ETHE1O95571 254 aa10.91□□□□□ -0.66
CAPN9-202ENST00000354537 HLA-DQB1P01920 261 aa10.91□□□□□ -0.66
CAPN9-202ENST00000354537 GAAP10253 952 aa10.91□□□□□ -0.66
CAPN9-202ENST00000354537 ZNF8P17098 575 aaPredicted RBP10.91□□□□□ -0.66
CAPN9-202ENST00000354537 MYL9P24844 172 aa10.91□□□□□ -0.66
CAPN9-202ENST00000354537 IRS1P35568 1242 aa10.91□□□□□ -0.66
CAPN9-202ENST00000354537 SMIM11AP58511 58 aa10.91□□□□□ -0.66
CAPN9-202ENST00000354537 SNRPD1P62314 119 aaKnown RBP10.91□□□□□ -0.66
CAPN9-202ENST00000354537 RACK1P63244 317 aaKnown RBP10.91□□□□□ -0.66
CAPN9-202ENST00000354537 MPP7Q5T2T1 576 aa10.91□□□□□ -0.66
CAPN9-202ENST00000354537 AGTRAPQ6RW13 159 aa10.91□□□□□ -0.66
CAPN9-202ENST00000354537 LAX1Q8IWV1 398 aa10.91□□□□□ -0.66
CAPN9-202ENST00000354537 SLC34A3Q8N130 599 aa10.91□□□□□ -0.66
CAPN9-202ENST00000354537 ZFAND1Q8TCF1 268 aa10.91□□□□□ -0.66
CAPN9-202ENST00000354537 AP3S1Q92572 193 aa10.91□□□□□ -0.66
CAPN9-202ENST00000354537 TIFAQ96CG3 184 aa10.91□□□□□ -0.66
CAPN9-202ENST00000354537 MED30Q96HR3 178 aa10.91□□□□□ -0.66
CAPN9-202ENST00000354537 TEFMQ96QE5 360 aaKnown RBP10.91□□□□□ -0.66
CAPN9-202ENST00000354537 SYT17Q9BSW7 474 aa10.91□□□□□ -0.66
CAPN9-202ENST00000354537 MYNNQ9NPC7 610 aa10.91□□□□□ -0.66
CAPN9-202ENST00000354537 SNTG1Q9NSN8 517 aa10.91□□□□□ -0.66
CAPN9-202ENST00000354537 SLC6A14Q9UN76 642 aa10.91□□□□□ -0.66
CAPN9-202ENST00000354537 GNG14A0A1W2PPG7 69 aa10.91□□□□□ -0.66
CAPN9-202ENST00000354537 IRGMA1A4Y4 181 aa10.91□□□□□ -0.66
CAPN9-202ENST00000354537 FABP12A6NFH5 140 aa10.91□□□□□ -0.66
CAPN9-202ENST00000354537 STK25O00506 426 aa10.91□□□□□ -0.66
CAPN9-202ENST00000354537 FAAHO00519 579 aa10.91□□□□□ -0.66
CAPN9-202ENST00000354537 SGTAO43765 313 aa10.91□□□□□ -0.66
CAPN9-202ENST00000354537 CYP17A1P05093 508 aa10.91□□□□□ -0.66
CAPN9-202ENST00000354537 FURINP09958 794 aa10.91□□□□□ -0.66
CAPN9-202ENST00000354537 CPEP16870 476 aa10.91□□□□□ -0.66
CAPN9-202ENST00000354537 SLC9A3P48764 834 aa10.91□□□□□ -0.66
CAPN9-202ENST00000354537 SPINT3P49223 89 aa10.91□□□□□ -0.66
CAPN9-202ENST00000354537 WDR5P61964 334 aaKnown RBP10.91□□□□□ -0.66
CAPN9-202ENST00000354537 SMAD3P84022 425 aaKnown RBP10.91□□□□□ -0.66
CAPN9-202ENST00000354537 GALK2Q01415 458 aa10.91□□□□□ -0.66
CAPN9-202ENST00000354537 DDX39BQ13838 428 aaKnown RBP10.91□□□□□ -0.66
CAPN9-202ENST00000354537 ZNF385BQ569K4 471 aa10.91□□□□□ -0.66
CAPN9-202ENST00000354537 DGKKQ5KSL6 1271 aa10.91□□□□□ -0.66
CAPN9-202ENST00000354537 MED27Q6P2C8 311 aa10.91□□□□□ -0.66
CAPN9-202ENST00000354537 FAM131AQ6UXB0 335 aa10.91□□□□□ -0.66
CAPN9-202ENST00000354537 ZNF852Q6ZMS4 543 aa10.91□□□□□ -0.66
CAPN9-202ENST00000354537 DNAJB7Q7Z6W7 309 aaPredicted RBP10.91□□□□□ -0.66
CAPN9-202ENST00000354537 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.91□□□□□ -0.66
CAPN9-202ENST00000354537 PHC2Q8IXK0 858 aa10.91□□□□□ -0.66
CAPN9-202ENST00000354537 TAGAPQ8N103 731 aa10.91□□□□□ -0.66
CAPN9-202ENST00000354537 HUS1BQ8NHY5 278 aa10.91□□□□□ -0.66
CAPN9-202ENST00000354537 APOBEC4Q8WW27 367 aaKnown RBP10.91□□□□□ -0.66
CAPN9-202ENST00000354537 JPH3Q8WXH2 748 aaPredicted RBP10.91□□□□□ -0.66
CAPN9-202ENST00000354537 ELMO1Q92556 727 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms