RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 SOX14O95416 240 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 MPC1LP0DKB6 136 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 CXCR2P25025 360 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 PSMA3P25788 255 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 TIA1P31483 386 aaKnown RBP eCLIP9.94□□□□□ -0.82
SMPD4-201ENST00000351288 IDUAP35475 653 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 DNASE1L3Q13609 305 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 LASP1Q14847 261 aaKnown RBP9.94□□□□□ -0.82
SMPD4-201ENST00000351288 IRF4Q15306 451 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 VMACQ2NL98 169 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 ZNF385BQ569K4 471 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 SLCO6A1Q86UG4 719 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 METTL27Q8N6F8 245 aaPredicted RBP9.94□□□□□ -0.82
SMPD4-201ENST00000351288 ECHDC3Q96DC8 303 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 LRIG1Q96JA1 1093 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 RAD21L1Q9H4I0 556 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 KCNK12Q9HB15 430 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 CEP250Q9BV73 2442 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 KCNE1BA0A087WTH5 132 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 POM121BA6NF01 834 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 B4DGG1 531 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 TNFRSF11BO00300 401 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 NDUFS2O75306 463 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 PRLHRP49683 370 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 GZMMP51124 257 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 WNT3P56703 355 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 UBE3AQ05086 875 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 EIF4HQ15056 248 aaKnown RBP9.94□□□□□ -0.82
SMPD4-201ENST00000351288 DEFB110Q30KQ9 67 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 RPS26P11Q5JNZ5 115 aaPredicted RBP9.94□□□□□ -0.82
SMPD4-201ENST00000351288 GCNT6Q5T4J0 391 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 ANXA8L1Q5VT79 327 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 LIPJQ5W064 366 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 PAGE2Q7Z2X7 111 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 PTOV1Q86YD1 416 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 GOLM1Q8NBJ4 401 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 RIPOR3Q96MK2 946 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 VPS35Q96QK1 796 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 ADAP2Q9NPF8 381 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 THUMPD1Q9NXG2 353 aaKnown RBP9.94□□□□□ -0.82
SMPD4-201ENST00000351288 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.94□□□□□ -0.82
SMPD4-201ENST00000351288 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.94□□□□□ -0.82
SMPD4-201ENST00000351288 TCRBV21S2A2A0A5A6 115 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 OCM2P0CE71 109 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 OCMP0CE72 109 aaPredicted RBP9.94□□□□□ -0.82
SMPD4-201ENST00000351288 PPP2R1BP30154 601 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 CCR8P51685 355 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 PTPN5P54829 565 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 BTN3A2P78410 334 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 FXNQ16595 210 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 ANKRD54Q6NXT1 300 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 PNCKQ6P2M8 343 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 CCDC71Q8IV32 467 aaPredicted RBP9.94□□□□□ -0.82
SMPD4-201ENST00000351288 ZZZ3Q8IYH5 903 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 CLIP4Q8N3C7 705 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 ABHD11Q8NFV4 315 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 CCL4L1Q8NHW4 92 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 RPLP0P6Q8NHW5 317 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 ZFP90Q8TF47 636 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 PATE1Q8WXA2 126 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 SMPDL3AQ92484 453 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 RORBQ92753 470 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 ABCG4Q9H172 646 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 PSME2Q9UL46 239 aa9.94□□□□□ -0.82
SMPD4-201ENST00000351288 KMOO15229 486 aa9.93□□□□□ -0.82
SMPD4-201ENST00000351288 SEC14L2O76054 403 aa9.93□□□□□ -0.82
SMPD4-201ENST00000351288 NADKO95544 446 aaPredicted RBP9.93□□□□□ -0.82
SMPD4-201ENST00000351288 PVRP15151 417 aa9.93□□□□□ -0.82
SMPD4-201ENST00000351288 NTSP30990 170 aa9.93□□□□□ -0.82
SMPD4-201ENST00000351288 RYKP34925 604 aa9.93□□□□□ -0.82
SMPD4-201ENST00000351288 SLC6A12P48065 614 aa9.93□□□□□ -0.82
SMPD4-201ENST00000351288 ARL4DP49703 201 aa9.93□□□□□ -0.82
SMPD4-201ENST00000351288 NCBP2P52298 156 aaKnown RBP eCLIP9.93□□□□□ -0.82
SMPD4-201ENST00000351288 DAB2P98082 770 aa9.93□□□□□ -0.82
SMPD4-201ENST00000351288 ABHD18Q0P651 414 aa9.93□□□□□ -0.82
SMPD4-201ENST00000351288 SCARB2Q14108 478 aa9.93□□□□□ -0.82
SMPD4-201ENST00000351288 GBX1Q14549 363 aa9.93□□□□□ -0.82
SMPD4-201ENST00000351288 DEFB134Q4QY38 66 aa9.93□□□□□ -0.82
SMPD4-201ENST00000351288 ATG9BQ674R7 924 aa9.93□□□□□ -0.82
SMPD4-201ENST00000351288 NXPE4Q6UWF7 544 aa9.93□□□□□ -0.82
SMPD4-201ENST00000351288 ARSGQ96EG1 525 aa9.93□□□□□ -0.82
SMPD4-201ENST00000351288 IL4I1Q96RQ9 567 aa9.93□□□□□ -0.82
SMPD4-201ENST00000351288 FAM129BQ96TA1 746 aa9.93□□□□□ -0.82
SMPD4-201ENST00000351288 PHOX2BQ99453 314 aa9.93□□□□□ -0.82
SMPD4-201ENST00000351288 TRNAU1APQ9NX07 287 aaKnown RBP9.93□□□□□ -0.82
SMPD4-201ENST00000351288 SLC27A6Q9Y2P4 619 aa9.93□□□□□ -0.82
SMPD4-201ENST00000351288 PCYT1BQ9Y5K3 369 aaPredicted RBP9.93□□□□□ -0.82
SMPD4-201ENST00000351288 PLXND1Q9Y4D7 1925 aa9.93□□□□□ -0.82
SMPD4-201ENST00000351288 SH3PXD2BA1X283 911 aa9.93□□□□□ -0.82
SMPD4-201ENST00000351288 TRIM64CA6NLI5 447 aa9.93□□□□□ -0.82
SMPD4-201ENST00000351288 GFRA2O00451 464 aa9.93□□□□□ -0.82
SMPD4-201ENST00000351288 EFEMP2O95967 443 aa9.93□□□□□ -0.82
SMPD4-201ENST00000351288 FUCA1P04066 466 aa9.93□□□□□ -0.82
SMPD4-201ENST00000351288 NPPBP16860 134 aa9.93□□□□□ -0.82
SMPD4-201ENST00000351288 NTSR1P30989 418 aa9.93□□□□□ -0.82
SMPD4-201ENST00000351288 HBA1P69905 142 aa9.93□□□□□ -0.82
SMPD4-201ENST00000351288 ILF3Q12906 894 aaKnown RBP eCLIP9.93□□□□□ -0.828e-7■■■□□ 15
SMPD4-201ENST00000351288 SP140Q13342 867 aa9.93□□□□□ -0.82
SMPD4-201ENST00000351288 ADPRMQ3LIE5 342 aa9.93□□□□□ -0.82
SMPD4-201ENST00000351288 ZNF691Q5VV52 312 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms