RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 ARCN1P48444 511 aaKnown RBP10.47□□□□□ -0.73
CLCN6-202ENST00000346436 PLCXD2Q0VAA5 305 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 SCAPQ12770 1279 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 ZNF57Q68EA5 555 aaPredicted RBP10.47□□□□□ -0.73
CLCN6-202ENST00000346436 LIN54Q6MZP7 749 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 NOXRED1Q6NXP6 359 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 SLC34A3Q8N130 599 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 ZADH2Q8N4Q0 377 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 CSNK1A1LQ8N752 337 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 GATAD2BQ8WXI9 593 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 C3orf30Q96M34 536 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 CRB3Q9BUF7 120 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 WDR12Q9GZL7 423 aaKnown RBP10.47□□□□□ -0.73
CLCN6-202ENST00000346436 DERL2Q9GZP9 239 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.47□□□□□ -0.73
CLCN6-202ENST00000346436 SPATA7Q9P0W8 599 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 TMA7Q9Y2S6 64 aaKnown RBP10.47□□□□□ -0.73
CLCN6-202ENST00000346436 ADAMTSL1Q8N6G6 1762 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 CLDN25C9JDP6 229 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 XPNPEP2O43895 674 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 ADAMTS4O75173 837 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 ZNF20P17024 532 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 PXNP49023 591 aaPredicted RBP10.47□□□□□ -0.73
CLCN6-202ENST00000346436 ZNF267Q14586 743 aaPredicted RBP10.47□□□□□ -0.73
CLCN6-202ENST00000346436 FIBINQ8TAL6 211 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 S100ZQ8WXG8 99 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 NKD1Q969G9 470 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 MOAP1Q96BY2 351 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 DHRS1Q96LJ7 313 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 KCNC2Q96PR1 638 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 TRIM39Q9HCM9 518 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 CD320Q9NPF0 282 aa10.47□□□□□ -0.73
CLCN6-202ENST00000346436 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.46□□□□□ -0.73
CLCN6-202ENST00000346436 MAGEB17A8MXT2 336 aa10.46□□□□□ -0.73
CLCN6-202ENST00000346436 IL12AP29459 219 aa10.46□□□□□ -0.73
CLCN6-202ENST00000346436 NUDT6P53370 316 aa10.46□□□□□ -0.73
CLCN6-202ENST00000346436 GANABQ14697 944 aaKnown RBP10.46□□□□□ -0.73
CLCN6-202ENST00000346436 NPTX1Q15818 432 aa10.46□□□□□ -0.73
CLCN6-202ENST00000346436 LCTLQ6UWM7 567 aa10.46□□□□□ -0.73
CLCN6-202ENST00000346436 TMIGD1Q6UXZ0 262 aa10.46□□□□□ -0.73
CLCN6-202ENST00000346436 PPP1R3BQ86XI6 285 aa10.46□□□□□ -0.73
CLCN6-202ENST00000346436 RAB2BQ8WUD1 216 aa10.46□□□□□ -0.73
CLCN6-202ENST00000346436 TSACCQ96A04 125 aaPredicted RBP10.46□□□□□ -0.73
CLCN6-202ENST00000346436 CCM2LQ9NUG4 571 aaPredicted RBP10.46□□□□□ -0.73
CLCN6-202ENST00000346436 TAS2R9Q9NYW1 312 aa10.46□□□□□ -0.73
CLCN6-202ENST00000346436 ST14Q9Y5Y6 855 aa10.46□□□□□ -0.73
CLCN6-202ENST00000346436 LINC01553A4QN01 128 aa10.46□□□□□ -0.73
CLCN6-202ENST00000346436 GABRB3P28472 473 aa10.46□□□□□ -0.73
CLCN6-202ENST00000346436 RAET1LQ5VY80 246 aa10.46□□□□□ -0.73
CLCN6-202ENST00000346436 DPY19L3Q6ZPD9 716 aa10.46□□□□□ -0.73
CLCN6-202ENST00000346436 TTLL10Q6ZVT0 673 aa10.46□□□□□ -0.73
CLCN6-202ENST00000346436 BMFQ96LC9 184 aa10.46□□□□□ -0.73
CLCN6-202ENST00000346436 A0A1W2PRB8 838 aa10.46□□□□□ -0.74
CLCN6-202ENST00000346436 LCHNA4D1U4 455 aa10.46□□□□□ -0.74
CLCN6-202ENST00000346436 SNPHO15079 494 aa10.46□□□□□ -0.74
CLCN6-202ENST00000346436 OR5F1O95221 314 aa10.46□□□□□ -0.74
CLCN6-202ENST00000346436 PRDX3P30048 256 aaKnown RBP10.46□□□□□ -0.74
CLCN6-202ENST00000346436 MXD1Q05195 221 aa10.46□□□□□ -0.74
CLCN6-202ENST00000346436 ALG1LQ6GMV1 187 aa10.46□□□□□ -0.74
CLCN6-202ENST00000346436 CYP4V2Q6ZWL3 525 aaPredicted RBP10.46□□□□□ -0.74
CLCN6-202ENST00000346436 ABHD12BQ7Z5M8 362 aaPredicted RBP10.46□□□□□ -0.74
CLCN6-202ENST00000346436 CNIH3Q8TBE1 160 aa10.46□□□□□ -0.74
CLCN6-202ENST00000346436 ENKURQ8TC29 256 aa10.46□□□□□ -0.74
CLCN6-202ENST00000346436 PIH1D2Q8WWB5 315 aa10.46□□□□□ -0.74
CLCN6-202ENST00000346436 CRISPLD1Q9H336 500 aa10.46□□□□□ -0.74
CLCN6-202ENST00000346436 C8orf4Q9NR00 106 aa10.46□□□□□ -0.74
CLCN6-202ENST00000346436 SLC22A14Q9Y267 594 aa10.46□□□□□ -0.74
CLCN6-202ENST00000346436 RREB1Q92766 1687 aa10.46□□□□□ -0.74
CLCN6-202ENST00000346436 FAM92AA1XBS5 289 aa10.46□□□□□ -0.74
CLCN6-202ENST00000346436 BOLA2-SMG1P6H3BVE0 249 aa10.46□□□□□ -0.74
CLCN6-202ENST00000346436 TMEM189-UBE2V1I3L0A0 370 aa10.46□□□□□ -0.74
CLCN6-202ENST00000346436 TBX1O43435 398 aa10.46□□□□□ -0.74
CLCN6-202ENST00000346436 AIREO43918 545 aa10.46□□□□□ -0.74
CLCN6-202ENST00000346436 GBAP04062 536 aa10.46□□□□□ -0.74
CLCN6-202ENST00000346436 IFNA6P05013 189 aa10.46□□□□□ -0.74
CLCN6-202ENST00000346436 ADRB3P13945 408 aa10.46□□□□□ -0.74
CLCN6-202ENST00000346436 CYP27C1Q4G0S4 372 aa10.46□□□□□ -0.74
CLCN6-202ENST00000346436 Q6ZVL8 140 aa10.46□□□□□ -0.74
CLCN6-202ENST00000346436 PAQR9Q6ZVX9 377 aa10.46□□□□□ -0.74
CLCN6-202ENST00000346436 OR5K1Q8NHB7 308 aa10.46□□□□□ -0.74
CLCN6-202ENST00000346436 RPF2Q9H7B2 306 aaKnown RBP10.46□□□□□ -0.74
CLCN6-202ENST00000346436 ZNF696Q9H7X3 374 aa10.46□□□□□ -0.74
CLCN6-202ENST00000346436 C14orf105Q9NVL8 296 aa10.46□□□□□ -0.74
CLCN6-202ENST00000346436 PTRH2Q9Y3E5 179 aaKnown RBP10.46□□□□□ -0.74
CLCN6-202ENST00000346436 A6NL46 340 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 AREL1O15033 823 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 C6P13671 934 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 TGFBR2P37173 567 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 DNASE1L3Q13609 305 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 ZNF542PQ5EBM4 170 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 FAM219BQ5XKK7 198 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 Q6ZSR6 202 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 NANOGNBQ7Z5D8 188 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 STON2Q8WXE9 905 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 RFKQ969G6 155 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 GAREM1Q9H706 876 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 C11orf16Q9NQ32 467 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 ZIM2Q9NZV7 527 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 MAU2Q9Y6X3 613 aa10.45□□□□□ -0.74
CLCN6-202ENST00000346436 LOC100130705A0A1B0GUX0 176 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms