RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 SNX8Q9Y5X2 465 aa14.73□□□□□ -0.05
UPF3B-202ENST00000345865 H7BY64 318 aa14.72□□□□□ -0.05
UPF3B-202ENST00000345865 B4GALT2O60909 372 aa14.72□□□□□ -0.05
UPF3B-202ENST00000345865 FUCA1P04066 466 aa14.72□□□□□ -0.05
UPF3B-202ENST00000345865 OPRL1P41146 370 aa14.72□□□□□ -0.05
UPF3B-202ENST00000345865 WASP42768 502 aa14.72□□□□□ -0.05
UPF3B-202ENST00000345865 VBP1P61758 197 aa14.72□□□□□ -0.05
UPF3B-202ENST00000345865 FOXD4Q12950 439 aaPredicted RBP14.72□□□□□ -0.05
UPF3B-202ENST00000345865 RPA4Q13156 261 aa14.72□□□□□ -0.05
UPF3B-202ENST00000345865 CYP2A13Q16696 494 aa14.72□□□□□ -0.05
UPF3B-202ENST00000345865 MICAQ29983 383 aa14.72□□□□□ -0.05
UPF3B-202ENST00000345865 ZNF630Q2M218 657 aaPredicted RBP14.72□□□□□ -0.05
UPF3B-202ENST00000345865 KHDRBS2Q5VWX1 349 aaKnown RBP14.72□□□□□ -0.05
UPF3B-202ENST00000345865 TANGO2Q6ICL3 276 aa14.72□□□□□ -0.05
UPF3B-202ENST00000345865 IKBIPQ70UQ0 350 aa14.72□□□□□ -0.05
UPF3B-202ENST00000345865 PRSS48Q7RTY5 328 aa14.72□□□□□ -0.05
UPF3B-202ENST00000345865 BTLAQ7Z6A9 289 aa14.72□□□□□ -0.05
UPF3B-202ENST00000345865 LRRTM4Q86VH4 590 aa14.72□□□□□ -0.05
UPF3B-202ENST00000345865 C17orf64Q86WR6 236 aa14.72□□□□□ -0.05
UPF3B-202ENST00000345865 LGI4Q8N135 537 aa14.72□□□□□ -0.05
UPF3B-202ENST00000345865 MIPOL1Q8TD10 442 aa14.72□□□□□ -0.05
UPF3B-202ENST00000345865 UCN3Q969E3 161 aa14.72□□□□□ -0.05
UPF3B-202ENST00000345865 PRAP1Q96NZ9 151 aa14.72□□□□□ -0.05
UPF3B-202ENST00000345865 ZNF347Q96SE7 839 aa14.72□□□□□ -0.05
UPF3B-202ENST00000345865 MS4A8Q9BY19 250 aa14.72□□□□□ -0.05
UPF3B-202ENST00000345865 ACER3Q9NUN7 267 aa14.72□□□□□ -0.05
UPF3B-202ENST00000345865 TBC1D23Q9NUY8 699 aa14.72□□□□□ -0.05
UPF3B-202ENST00000345865 WBP1LQ9NX94 342 aa14.72□□□□□ -0.05
UPF3B-202ENST00000345865 SELENONQ9NZV5 590 aa14.72□□□□□ -0.05
UPF3B-202ENST00000345865 SERGEFQ9UGK8 458 aa14.72□□□□□ -0.05
UPF3B-202ENST00000345865 RAB23Q9ULC3 237 aa14.72□□□□□ -0.05
UPF3B-202ENST00000345865 SLC6A14Q9UN76 642 aa14.72□□□□□ -0.05
UPF3B-202ENST00000345865 WDR37Q9Y2I8 494 aa14.72□□□□□ -0.05
UPF3B-202ENST00000345865 RWDD3Q9Y3V2 267 aa14.72□□□□□ -0.05
UPF3B-202ENST00000345865 PCDHGA2Q9Y5H1 932 aa14.72□□□□□ -0.05
UPF3B-202ENST00000345865 SNX11Q9Y5W9 270 aa14.72□□□□□ -0.05
UPF3B-202ENST00000345865 TOR1BO14657 336 aa14.72□□□□□ -0.05
UPF3B-202ENST00000345865 DDCP20711 480 aa14.72□□□□□ -0.05
UPF3B-202ENST00000345865 C21orf33P30042 268 aaPredicted RBP14.72□□□□□ -0.05
UPF3B-202ENST00000345865 GGT2P36268 569 aa14.72□□□□□ -0.05
UPF3B-202ENST00000345865 TGFBR1P36897 503 aa14.72□□□□□ -0.05
UPF3B-202ENST00000345865 XCR1P46094 333 aa14.72□□□□□ -0.05
UPF3B-202ENST00000345865 LIMS1P48059 325 aa14.72□□□□□ -0.05
UPF3B-202ENST00000345865 PHEXP78562 749 aa14.72□□□□□ -0.05
UPF3B-202ENST00000345865 RPS26P11Q5JNZ5 115 aaPredicted RBP14.72□□□□□ -0.05
UPF3B-202ENST00000345865 GET4Q7L5D6 327 aaPredicted RBP14.72□□□□□ -0.05
UPF3B-202ENST00000345865 AMER3Q8N944 861 aa14.72□□□□□ -0.05
UPF3B-202ENST00000345865 LINC01555Q8NAE3 123 aa14.72□□□□□ -0.05
UPF3B-202ENST00000345865 TRUB1Q8WWH5 349 aaKnown RBP14.72□□□□□ -0.05
UPF3B-202ENST00000345865 LZICQ8WZA0 190 aa14.72□□□□□ -0.05
UPF3B-202ENST00000345865 THAP10Q9P2Z0 257 aaPredicted RBP14.72□□□□□ -0.05
UPF3B-202ENST00000345865 PRKAG2Q9UGJ0 569 aa14.72□□□□□ -0.05
UPF3B-202ENST00000345865 OR1A2Q9Y585 309 aa14.72□□□□□ -0.05
UPF3B-202ENST00000345865 ANKDD1BA6NHY2 528 aa14.71□□□□□ -0.05
UPF3B-202ENST00000345865 C1QTNF3-AMACRE9PGA6 284 aa14.71□□□□□ -0.05
UPF3B-202ENST00000345865 MID1O15344 667 aa14.71□□□□□ -0.05
UPF3B-202ENST00000345865 LATO43561 262 aa14.71□□□□□ -0.05
UPF3B-202ENST00000345865 POU2F1P14859 743 aa14.71□□□□□ -0.05
UPF3B-202ENST00000345865 UQCRC2P22695 453 aa14.71□□□□□ -0.05
UPF3B-202ENST00000345865 IDUAP35475 653 aa14.71□□□□□ -0.05
UPF3B-202ENST00000345865 SLC19A1P41440 591 aa14.71□□□□□ -0.05
UPF3B-202ENST00000345865 PXNP49023 591 aaPredicted RBP14.71□□□□□ -0.05
UPF3B-202ENST00000345865 MAPK12P53778 367 aa14.71□□□□□ -0.05
UPF3B-202ENST00000345865 ELOAQ14241 798 aaKnown RBP14.71□□□□□ -0.05
UPF3B-202ENST00000345865 PUM1Q14671 1186 aaKnown RBP eCLIP14.71□□□□□ -0.05
UPF3B-202ENST00000345865 GANABQ14697 944 aaKnown RBP14.71□□□□□ -0.05
UPF3B-202ENST00000345865 AGBL4Q5VU57 503 aa14.71□□□□□ -0.05
UPF3B-202ENST00000345865 ZNF605Q86T29 641 aa14.71□□□□□ -0.05
UPF3B-202ENST00000345865 HORMAD2Q8N7B1 307 aa14.71□□□□□ -0.05
UPF3B-202ENST00000345865 RPL3LQ92901 407 aaKnown RBP14.71□□□□□ -0.05
UPF3B-202ENST00000345865 CERS4Q9HA82 394 aa14.71□□□□□ -0.05
UPF3B-202ENST00000345865 RHCGQ9UBD6 479 aa14.71□□□□□ -0.05
UPF3B-202ENST00000345865 DPP7Q9UHL4 492 aa14.71□□□□□ -0.05
UPF3B-202ENST00000345865 PMF1-BGLAPU3KQ54 211 aa14.71□□□□□ -0.05
UPF3B-202ENST00000345865 MYO10Q9HD67 2058 aa14.71□□□□□ -0.05
UPF3B-202ENST00000345865 OR2A25A4D2G3 310 aa14.71□□□□□ -0.05
UPF3B-202ENST00000345865 M0R129 80 aa14.71□□□□□ -0.05
UPF3B-202ENST00000345865 PPM1DO15297 605 aa14.71□□□□□ -0.05
UPF3B-202ENST00000345865 KRT75O95678 551 aa14.71□□□□□ -0.05
UPF3B-202ENST00000345865 CA3P07451 260 aa14.71□□□□□ -0.05
UPF3B-202ENST00000345865 GJA4P35212 333 aa14.71□□□□□ -0.05
UPF3B-202ENST00000345865 TGFBR2P37173 567 aa14.71□□□□□ -0.05
UPF3B-202ENST00000345865 RXRGP48443 463 aa14.71□□□□□ -0.05
UPF3B-202ENST00000345865 ALDH9A1P49189 494 aa14.71□□□□□ -0.05
UPF3B-202ENST00000345865 CLCNKAP51800 687 aa14.71□□□□□ -0.05
UPF3B-202ENST00000345865 DSTNP60981 165 aa14.71□□□□□ -0.05
UPF3B-202ENST00000345865 NCS1P62166 190 aa14.71□□□□□ -0.05
UPF3B-202ENST00000345865 TNFAIP8L2Q6P589 184 aaPredicted RBP14.71□□□□□ -0.05
UPF3B-202ENST00000345865 VITQ6UXI7 678 aa14.71□□□□□ -0.05
UPF3B-202ENST00000345865 P2RY8Q86VZ1 359 aa14.71□□□□□ -0.05
UPF3B-202ENST00000345865 PLD3Q8IV08 490 aa14.71□□□□□ -0.05
UPF3B-202ENST00000345865 RHOXF1Q8NHV9 184 aa14.71□□□□□ -0.05
UPF3B-202ENST00000345865 PROX1Q92786 737 aa14.71□□□□□ -0.05
UPF3B-202ENST00000345865 SH3YL1Q96HL8 342 aaPredicted RBP14.71□□□□□ -0.05
UPF3B-202ENST00000345865 WASH6PQ9NQA3 447 aa14.71□□□□□ -0.05
UPF3B-202ENST00000345865 PRDM8Q9NQV8 689 aa14.71□□□□□ -0.05
UPF3B-202ENST00000345865 ZNF226Q9NYT6 803 aa14.71□□□□□ -0.05
UPF3B-202ENST00000345865 EYSQ5T1H1 3165 aa14.7□□□□□ -0.06
UPF3B-202ENST00000345865 TRBC2A0A5B9 178 aa14.7□□□□□ -0.06
UPF3B-202ENST00000345865 TMPRSS11DO60235 418 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms