RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 ABCB9Q9NP78 766 aa12.72□□□□□ -0.37
CASC4-202ENST00000345795 VNN3Q9NY84 501 aa12.72□□□□□ -0.37
CASC4-202ENST00000345795 DAPK2Q9UIK4 370 aa12.72□□□□□ -0.37
CASC4-202ENST00000345795 TPRKBQ9Y3C4 175 aa12.72□□□□□ -0.37
CASC4-202ENST00000345795 DNMT3AQ9Y6K1 912 aaPredicted RBP12.72□□□□□ -0.37
CASC4-202ENST00000345795 CCDC88CQ9P219 2028 aa12.72□□□□□ -0.37
CASC4-202ENST00000345795 VWA8A3KMH1 1905 aa12.72□□□□□ -0.37
CASC4-202ENST00000345795 AREL1O15033 823 aa12.72□□□□□ -0.37
CASC4-202ENST00000345795 SCAMP2O15127 329 aaKnown RBP12.72□□□□□ -0.37
CASC4-202ENST00000345795 LDB3O75112 727 aa12.72□□□□□ -0.37
CASC4-202ENST00000345795 TAS2R41P59536 307 aa12.72□□□□□ -0.37
CASC4-202ENST00000345795 NCS1P62166 190 aa12.72□□□□□ -0.37
CASC4-202ENST00000345795 DCTN2Q13561 401 aaKnown RBP12.72□□□□□ -0.37
CASC4-202ENST00000345795 DDHD1Q8NEL9 900 aa12.72□□□□□ -0.37
CASC4-202ENST00000345795 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.72□□□□□ -0.371e-6■■■■■ 29.8
CASC4-202ENST00000345795 ADAMTS15Q8TE58 950 aa12.72□□□□□ -0.37
CASC4-202ENST00000345795 GRHL3Q8TE85 626 aa12.72□□□□□ -0.37
CASC4-202ENST00000345795 PMEPA1Q969W9 287 aa12.72□□□□□ -0.37
CASC4-202ENST00000345795 ZHX1-C8orf76Q96EF9 292 aa12.72□□□□□ -0.37
CASC4-202ENST00000345795 GPATCH1Q9BRR8 931 aaKnown RBP12.72□□□□□ -0.37
CASC4-202ENST00000345795 NDUFA13Q9P0J0 144 aa12.72□□□□□ -0.37
CASC4-202ENST00000345795 RIMKLBQ9ULI2 386 aa12.72□□□□□ -0.37
CASC4-202ENST00000345795 GTF2A1LQ9UNN4 478 aa12.72□□□□□ -0.37
CASC4-202ENST00000345795 PRRC2CQ9Y520 2896 aaKnown RBP12.72□□□□□ -0.37
CASC4-202ENST00000345795 A0A1W2PS29 197 aa12.72□□□□□ -0.37
CASC4-202ENST00000345795 OR6C74A6NCV1 312 aa12.72□□□□□ -0.37
CASC4-202ENST00000345795 LATS1O95835 1130 aa12.72□□□□□ -0.37
CASC4-202ENST00000345795 IGHA2P01877 340 aa12.72□□□□□ -0.37
CASC4-202ENST00000345795 CDH3P22223 829 aa12.72□□□□□ -0.37
CASC4-202ENST00000345795 MNX1P50219 401 aaPredicted RBP12.72□□□□□ -0.37
CASC4-202ENST00000345795 SYPL1Q16563 259 aa12.72□□□□□ -0.37
CASC4-202ENST00000345795 ANKDD1AQ495B1 522 aa12.72□□□□□ -0.37
CASC4-202ENST00000345795 IFI44LQ53G44 452 aa12.72□□□□□ -0.37
CASC4-202ENST00000345795 SOWAHCQ53LP3 525 aaPredicted RBP12.72□□□□□ -0.37
CASC4-202ENST00000345795 RNASE12Q5GAN4 147 aaKnown RBP12.72□□□□□ -0.37
CASC4-202ENST00000345795 FAM92BQ6ZTR7 304 aa12.72□□□□□ -0.37
CASC4-202ENST00000345795 USP53Q70EK8 1073 aa12.72□□□□□ -0.37
CASC4-202ENST00000345795 MSRB3Q8IXL7 192 aa12.72□□□□□ -0.37
CASC4-202ENST00000345795 CADM2Q8N3J6 435 aa12.72□□□□□ -0.37
CASC4-202ENST00000345795 OR5K1Q8NHB7 308 aa12.72□□□□□ -0.37
CASC4-202ENST00000345795 KCNS3Q9BQ31 491 aa12.72□□□□□ -0.37
CASC4-202ENST00000345795 CEP44Q9C0F1 390 aa12.72□□□□□ -0.37
CASC4-202ENST00000345795 LHPPQ9H008 270 aa12.72□□□□□ -0.37
CASC4-202ENST00000345795 RDH14Q9HBH5 336 aa12.72□□□□□ -0.37
CASC4-202ENST00000345795 GPR83Q9NYM4 423 aa12.72□□□□□ -0.37
CASC4-202ENST00000345795 DENRO43583 198 aaKnown RBP12.71□□□□□ -0.37
CASC4-202ENST00000345795 CNOT3O75175 753 aaKnown RBP12.71□□□□□ -0.37
CASC4-202ENST00000345795 ATE1O95260 518 aa12.71□□□□□ -0.37
CASC4-202ENST00000345795 PNCKQ6P2M8 343 aa12.71□□□□□ -0.37
CASC4-202ENST00000345795 SMPDL3AQ92484 453 aa12.71□□□□□ -0.37
CASC4-202ENST00000345795 DNASE1L2Q92874 299 aa12.71□□□□□ -0.37
CASC4-202ENST00000345795 USP7Q93009 1102 aa12.71□□□□□ -0.37
CASC4-202ENST00000345795 SPHK1Q9NYA1 384 aa12.71□□□□□ -0.37
CASC4-202ENST00000345795 TAS2R9Q9NYW1 312 aa12.71□□□□□ -0.37
CASC4-202ENST00000345795 ZNF780BQ9Y6R6 833 aa12.71□□□□□ -0.37
CASC4-202ENST00000345795 COL4A6Q14031 1691 aa12.71□□□□□ -0.37
CASC4-202ENST00000345795 NYNRINQ9P2P1 1898 aaKnown RBP12.71□□□□□ -0.37
CASC4-202ENST00000345795 ANHXE9PGG2 379 aa12.71□□□□□ -0.37
CASC4-202ENST00000345795 PCDH17O14917 1159 aa12.71□□□□□ -0.37
CASC4-202ENST00000345795 MT-ND2P03891 347 aa12.71□□□□□ -0.37
CASC4-202ENST00000345795 PABPC4LP0CB38 370 aaKnown RBP12.71□□□□□ -0.37
CASC4-202ENST00000345795 NUP107P57740 925 aa12.71□□□□□ -0.37
CASC4-202ENST00000345795 RGNQ15493 299 aa12.71□□□□□ -0.37
CASC4-202ENST00000345795 NDUFAF5Q5TEU4 345 aa12.71□□□□□ -0.37
CASC4-202ENST00000345795 C18orf63Q68DL7 685 aa12.71□□□□□ -0.37
CASC4-202ENST00000345795 FIGNL1Q6PIW4 674 aa12.71□□□□□ -0.37
CASC4-202ENST00000345795 DPPA4Q7L190 304 aa12.71□□□□□ -0.37
CASC4-202ENST00000345795 ANKFN1Q8N957 763 aa12.71□□□□□ -0.37
CASC4-202ENST00000345795 OR8J3Q8NGG0 315 aa12.71□□□□□ -0.37
CASC4-202ENST00000345795 ZNF707Q96C28 371 aaPredicted RBP12.71□□□□□ -0.37
CASC4-202ENST00000345795 KLHL31Q9H511 634 aa12.71□□□□□ -0.37
CASC4-202ENST00000345795 FGF22Q9HCT0 170 aa12.71□□□□□ -0.37
CASC4-202ENST00000345795 PREBQ9HCU5 417 aa12.71□□□□□ -0.37
CASC4-202ENST00000345795 GALNT8Q9NY28 637 aa12.71□□□□□ -0.37
CASC4-202ENST00000345795 RBMX2Q9Y388 322 aaKnown RBP12.71□□□□□ -0.37
CASC4-202ENST00000345795 CPN2P22792 545 aa12.71□□□□□ -0.38
CASC4-202ENST00000345795 PRLHRP49683 370 aa12.71□□□□□ -0.38
CASC4-202ENST00000345795 CDK9P50750 372 aaKnown RBP12.71□□□□□ -0.38
CASC4-202ENST00000345795 ILF3Q12906 894 aaKnown RBP eCLIP12.71□□□□□ -0.38
CASC4-202ENST00000345795 LTB4RQ15722 352 aa12.71□□□□□ -0.38
CASC4-202ENST00000345795 C5orf22Q49AR2 442 aa12.71□□□□□ -0.38
CASC4-202ENST00000345795 SPIN4Q56A73 249 aa12.71□□□□□ -0.38
CASC4-202ENST00000345795 C6orf141Q5SZD1 244 aa12.71□□□□□ -0.38
CASC4-202ENST00000345795 ARTNQ5T4W7 220 aa12.71□□□□□ -0.38
CASC4-202ENST00000345795 ATAD3BQ5T9A4 648 aa12.71□□□□□ -0.38
CASC4-202ENST00000345795 LIPJQ5W064 366 aa12.71□□□□□ -0.38
CASC4-202ENST00000345795 NEK10Q6ZWH5 1172 aa12.71□□□□□ -0.38
CASC4-202ENST00000345795 C6orf120Q7Z4R8 191 aa12.71□□□□□ -0.38
CASC4-202ENST00000345795 WFIKKN2Q8TEU8 576 aa12.71□□□□□ -0.38
CASC4-202ENST00000345795 C16orf58Q96GQ5 468 aa12.71□□□□□ -0.38
CASC4-202ENST00000345795 MRGPRX3Q96LB0 322 aa12.71□□□□□ -0.38
CASC4-202ENST00000345795 HHIPQ96QV1 700 aa12.71□□□□□ -0.38
CASC4-202ENST00000345795 FAM129BQ96TA1 746 aa12.71□□□□□ -0.38
CASC4-202ENST00000345795 SLC27A6Q9Y2P4 619 aa12.71□□□□□ -0.38
CASC4-202ENST00000345795 PCDHB11Q9Y5F2 797 aa12.71□□□□□ -0.38
CASC4-202ENST00000345795 DOCK9Q9BZ29 2069 aa12.7□□□□□ -0.38
CASC4-202ENST00000345795 LCMT2O60294 686 aaKnown RBP12.7□□□□□ -0.38
CASC4-202ENST00000345795 UGT2B17O75795 530 aa12.7□□□□□ -0.38
CASC4-202ENST00000345795 KRT75O95678 551 aa12.7□□□□□ -0.38
CASC4-202ENST00000345795 FGF19O95750 216 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms