RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 UAP1Q16222 522 aaPredicted RBP11.6□□□□□ -0.55
SGCA-202ENST00000344627 CDKL4Q5MAI5 379 aa11.6□□□□□ -0.55
SGCA-202ENST00000344627 CYS1Q717R9 158 aa11.6□□□□□ -0.55
SGCA-202ENST00000344627 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.6□□□□□ -0.55
SGCA-202ENST00000344627 CLNKQ7Z7G1 428 aa11.6□□□□□ -0.55
SGCA-202ENST00000344627 OR2L5Q8NG80 312 aa11.6□□□□□ -0.55
SGCA-202ENST00000344627 SREK1Q8WXA9 508 aaKnown RBP11.6□□□□□ -0.55
SGCA-202ENST00000344627 PTCD3Q96EY7 689 aaKnown RBP11.6□□□□□ -0.55
SGCA-202ENST00000344627 SEC16BQ96JE7 1060 aa11.6□□□□□ -0.55
SGCA-202ENST00000344627 F2RL3Q96RI0 385 aa11.6□□□□□ -0.55
SGCA-202ENST00000344627 SERINC2Q96SA4 455 aa11.6□□□□□ -0.55
SGCA-202ENST00000344627 CCDC77Q9BR77 488 aa11.6□□□□□ -0.55
SGCA-202ENST00000344627 EFCAB11Q9BUY7 163 aa11.6□□□□□ -0.55
SGCA-202ENST00000344627 NPLQ9BXD5 320 aaPredicted RBP11.6□□□□□ -0.55
SGCA-202ENST00000344627 CD244Q9BZW8 370 aa11.6□□□□□ -0.55
SGCA-202ENST00000344627 PITHD1Q9GZP4 211 aaPredicted RBP11.6□□□□□ -0.55
SGCA-202ENST00000344627 EHD1Q9H4M9 534 aa11.6□□□□□ -0.55
SGCA-202ENST00000344627 COQ3Q9NZJ6 369 aa11.6□□□□□ -0.55
SGCA-202ENST00000344627 PTBP2Q9UKA9 531 aaKnown RBP11.6□□□□□ -0.55
SGCA-202ENST00000344627 NPIPA1Q9UND3 350 aa11.6□□□□□ -0.55
SGCA-202ENST00000344627 KLF13Q9Y2Y9 288 aaPredicted RBP11.6□□□□□ -0.55
SGCA-202ENST00000344627 ANGPTL3Q9Y5C1 460 aa11.6□□□□□ -0.55
SGCA-202ENST00000344627 CSMD1Q96PZ7 3565 aa11.6□□□□□ -0.55
SGCA-202ENST00000344627 ESYT3A0FGR9 886 aa11.59□□□□□ -0.55
SGCA-202ENST00000344627 FOXO6A8MYZ6 492 aa11.59□□□□□ -0.55
SGCA-202ENST00000344627 KLRC4-KLRK1H3BQV0 150 aa11.59□□□□□ -0.55
SGCA-202ENST00000344627 UBXN8O00124 270 aa11.59□□□□□ -0.55
SGCA-202ENST00000344627 SLC25A12O75746 678 aa11.59□□□□□ -0.55
SGCA-202ENST00000344627 NEURL1O76050 574 aa11.59□□□□□ -0.55
SGCA-202ENST00000344627 WISP2O76076 250 aa11.59□□□□□ -0.55
SGCA-202ENST00000344627 LTA4HP09960 611 aaKnown RBP11.59□□□□□ -0.55
SGCA-202ENST00000344627 ABOP16442 354 aa11.59□□□□□ -0.55
SGCA-202ENST00000344627 TNNI3P19429 210 aa11.59□□□□□ -0.55
SGCA-202ENST00000344627 CERS1P27544 350 aa11.59□□□□□ -0.55
SGCA-202ENST00000344627 MSH2P43246 934 aa11.59□□□□□ -0.55
SGCA-202ENST00000344627 CLCN2P51788 898 aa11.59□□□□□ -0.55
SGCA-202ENST00000344627 MTTPP55157 894 aa11.59□□□□□ -0.55
SGCA-202ENST00000344627 RAB38P57729 211 aa11.59□□□□□ -0.55
SGCA-202ENST00000344627 MLF1P58340 268 aa11.59□□□□□ -0.55
SGCA-202ENST00000344627 BMPR2Q13873 1038 aa11.59□□□□□ -0.55
SGCA-202ENST00000344627 RCN2Q14257 317 aa11.59□□□□□ -0.55
SGCA-202ENST00000344627 EFTUD2Q15029 972 aaKnown RBP eCLIP11.59□□□□□ -0.55
SGCA-202ENST00000344627 ZKSCAN8Q15776 578 aaPredicted RBP11.59□□□□□ -0.55
SGCA-202ENST00000344627 C3AR1Q16581 482 aa11.59□□□□□ -0.55
SGCA-202ENST00000344627 MROH9Q5TGP6 573 aa11.59□□□□□ -0.55
SGCA-202ENST00000344627 ZNF468Q5VIY5 522 aaPredicted RBP11.59□□□□□ -0.55
SGCA-202ENST00000344627 TMEM211Q6ICI0 200 aa11.59□□□□□ -0.55
SGCA-202ENST00000344627 ADNP2Q6IQ32 1131 aa11.59□□□□□ -0.55
SGCA-202ENST00000344627 C8orf74Q6P047 294 aa11.59□□□□□ -0.55
SGCA-202ENST00000344627 LRRC70Q7Z2Q7 622 aa11.59□□□□□ -0.55
SGCA-202ENST00000344627 MYLK4Q86YV6 388 aaPredicted RBP11.59□□□□□ -0.55
SGCA-202ENST00000344627 TMEM156Q8N614 296 aa11.59□□□□□ -0.55
SGCA-202ENST00000344627 PDPRQ8NCN5 879 aa11.59□□□□□ -0.55
SGCA-202ENST00000344627 NFAM1Q8NET5 270 aaPredicted RBP11.59□□□□□ -0.55
SGCA-202ENST00000344627 B3GNT7Q8NFL0 401 aa11.59□□□□□ -0.55
SGCA-202ENST00000344627 ADAMTS18Q8TE60 1221 aa11.59□□□□□ -0.55
SGCA-202ENST00000344627 NXNL1Q96CM4 212 aa11.59□□□□□ -0.55
SGCA-202ENST00000344627 UBXN10Q96LJ8 280 aa11.59□□□□□ -0.55
SGCA-202ENST00000344627 NUDT4Q9NZJ9 180 aa11.59□□□□□ -0.55
SGCA-202ENST00000344627 OPTCQ9UBM4 332 aa11.59□□□□□ -0.55
SGCA-202ENST00000344627 ZNF490Q9ULM2 529 aaPredicted RBP11.59□□□□□ -0.55
SGCA-202ENST00000344627 LRBAP50851 2863 aa11.59□□□□□ -0.55
SGCA-202ENST00000344627 IGKV3D-11A0A0A0MRZ8 115 aa11.58□□□□□ -0.56
SGCA-202ENST00000344627 K7EPI3 171 aa11.58□□□□□ -0.56
SGCA-202ENST00000344627 NME2P1O60361 137 aa11.58□□□□□ -0.56
SGCA-202ENST00000344627 PRAMEF4O60810 478 aa11.58□□□□□ -0.56
SGCA-202ENST00000344627 URI1O94763 535 aaPredicted RBP11.58□□□□□ -0.56
SGCA-202ENST00000344627 TGFB1P01137 390 aa11.58□□□□□ -0.56
SGCA-202ENST00000344627 SLC35E2BP0CK96 405 aa11.58□□□□□ -0.56
SGCA-202ENST00000344627 ZNF24P17028 368 aa11.58□□□□□ -0.56
SGCA-202ENST00000344627 NME2P22392 152 aa11.58□□□□□ -0.56
SGCA-202ENST00000344627 GRNP28799 593 aaKnown RBP11.58□□□□□ -0.56
SGCA-202ENST00000344627 PPP2R1BP30154 601 aa11.58□□□□□ -0.56
SGCA-202ENST00000344627 KCNC1P48547 511 aa11.58□□□□□ -0.56
SGCA-202ENST00000344627 HLCSP50747 726 aa11.58□□□□□ -0.56
SGCA-202ENST00000344627 HNRNPFP52597 415 aaKnown RBP11.58□□□□□ -0.56
SGCA-202ENST00000344627 LIM2P55344 173 aa11.58□□□□□ -0.56
SGCA-202ENST00000344627 ADORA2A-AS1P86434 159 aa11.58□□□□□ -0.56
SGCA-202ENST00000344627 STX4Q12846 297 aa11.58□□□□□ -0.56
SGCA-202ENST00000344627 DLG1Q12959 904 aa11.58□□□□□ -0.56
SGCA-202ENST00000344627 NAB1Q13506 487 aa11.58□□□□□ -0.56
SGCA-202ENST00000344627 DDX39BQ13838 428 aaKnown RBP11.58□□□□□ -0.56
SGCA-202ENST00000344627 PRAMEF9Q5VWM5 478 aa11.58□□□□□ -0.56
SGCA-202ENST00000344627 MED27Q6P2C8 311 aa11.58□□□□□ -0.56
SGCA-202ENST00000344627 ABHD17CQ6PCB6 329 aa11.58□□□□□ -0.56
SGCA-202ENST00000344627 PAOXQ6QHF9 649 aa11.58□□□□□ -0.56
SGCA-202ENST00000344627 ZDHHC24Q6UX98 284 aa11.58□□□□□ -0.56
SGCA-202ENST00000344627 VN1R5Q7Z5H4 357 aa11.58□□□□□ -0.56
SGCA-202ENST00000344627 ISCA2Q86U28 154 aa11.58□□□□□ -0.56
SGCA-202ENST00000344627 SIAH3Q8IW03 269 aa11.58□□□□□ -0.56
SGCA-202ENST00000344627 GPALPP1Q8IXQ4 340 aa11.58□□□□□ -0.56
SGCA-202ENST00000344627 ZNF595Q8IYB9 648 aa11.58□□□□□ -0.56
SGCA-202ENST00000344627 TMEM52Q8NDY8 209 aa11.58□□□□□ -0.56
SGCA-202ENST00000344627 SRFBP1Q8NEF9 429 aaKnown RBP11.58□□□□□ -0.56
SGCA-202ENST00000344627 CHTF18Q8WVB6 975 aa11.58□□□□□ -0.56
SGCA-202ENST00000344627 ASB5Q8WWX0 329 aa11.58□□□□□ -0.56
SGCA-202ENST00000344627 ZNF592Q92610 1267 aa11.58□□□□□ -0.56
SGCA-202ENST00000344627 UBE2E3Q969T4 207 aa11.58□□□□□ -0.56
SGCA-202ENST00000344627 NCLNQ969V3 563 aa11.58□□□□□ -0.56
SGCA-202ENST00000344627 VMP1Q96GC9 406 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms