RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 SPRED1Q7Z699 444 aa13.97□□□□□ -0.17
CXCL12-201ENST00000343575 PATL1Q86TB9 770 aaKnown RBP13.97□□□□□ -0.17
CXCL12-201ENST00000343575 CARM1Q86X55 608 aa13.97□□□□□ -0.17
CXCL12-201ENST00000343575 LILRA2Q8N149 483 aa13.97□□□□□ -0.17
CXCL12-201ENST00000343575 PACRGLQ8N7B6 248 aa13.97□□□□□ -0.17
CXCL12-201ENST00000343575 KCT2Q8NC54 265 aa13.97□□□□□ -0.17
CXCL12-201ENST00000343575 TRPV3Q8NET8 790 aa13.97□□□□□ -0.17
CXCL12-201ENST00000343575 SLC13A3Q8WWT9 602 aa13.97□□□□□ -0.17
CXCL12-201ENST00000343575 ABTB1Q969K4 478 aaPredicted RBP13.97□□□□□ -0.17
CXCL12-201ENST00000343575 TEFMQ96QE5 360 aaKnown RBP13.97□□□□□ -0.17
CXCL12-201ENST00000343575 ZFYVE21Q9BQ24 234 aa13.97□□□□□ -0.17
CXCL12-201ENST00000343575 REXO4Q9GZR2 422 aaKnown RBP13.97□□□□□ -0.17
CXCL12-201ENST00000343575 CLMPQ9H6B4 373 aa13.97□□□□□ -0.17
CXCL12-201ENST00000343575 C1GALT1Q9NS00 363 aa13.97□□□□□ -0.17
CXCL12-201ENST00000343575 MAP10Q9P2G4 905 aa13.97□□□□□ -0.17
CXCL12-201ENST00000343575 RALGAPA1Q6GYQ0 2036 aa13.97□□□□□ -0.17
CXCL12-201ENST00000343575 FAM234BA2RU67 622 aa13.97□□□□□ -0.17
CXCL12-201ENST00000343575 NR5A2O00482 541 aa13.97□□□□□ -0.17
CXCL12-201ENST00000343575 PCDH7O60245 1069 aa13.97□□□□□ -0.17
CXCL12-201ENST00000343575 B3GALT4O96024 378 aa13.97□□□□□ -0.17
CXCL12-201ENST00000343575 C9P02748 559 aa13.97□□□□□ -0.17
CXCL12-201ENST00000343575 KLK1P06870 262 aa13.97□□□□□ -0.17
CXCL12-201ENST00000343575 ALPPL2P10696 532 aa13.97□□□□□ -0.17
CXCL12-201ENST00000343575 CDH3P22223 829 aa13.97□□□□□ -0.17
CXCL12-201ENST00000343575 GABRA4P48169 554 aa13.97□□□□□ -0.17
CXCL12-201ENST00000343575 DGKQP52824 942 aa13.97□□□□□ -0.17
CXCL12-201ENST00000343575 CEACAM7Q14002 265 aa13.97□□□□□ -0.17
CXCL12-201ENST00000343575 PROX2Q3B8N5 592 aa13.97□□□□□ -0.17
CXCL12-201ENST00000343575 KRT80Q6KB66 452 aa13.97□□□□□ -0.17
CXCL12-201ENST00000343575 USP53Q70EK8 1073 aa13.97□□□□□ -0.17
CXCL12-201ENST00000343575 TMPRSS9Q7Z410 1059 aa13.97□□□□□ -0.17
CXCL12-201ENST00000343575 C19orf47Q8N9M1 422 aaKnown RBP13.97□□□□□ -0.17
CXCL12-201ENST00000343575 PRSS33Q8NF86 280 aa13.97□□□□□ -0.17
CXCL12-201ENST00000343575 TNIP2Q8NFZ5 429 aa13.97□□□□□ -0.17
CXCL12-201ENST00000343575 RMND5BQ96G75 393 aaPredicted RBP13.97□□□□□ -0.17
CXCL12-201ENST00000343575 TGM7Q96PF1 710 aa13.97□□□□□ -0.17
CXCL12-201ENST00000343575 LRFN3Q9BTN0 628 aa13.97□□□□□ -0.17
CXCL12-201ENST00000343575 SLC25A23Q9BV35 468 aa13.97□□□□□ -0.17
CXCL12-201ENST00000343575 CLK4Q9HAZ1 481 aaKnown RBP13.97□□□□□ -0.17
CXCL12-201ENST00000343575 PRDM7Q9NQW5 492 aa13.97□□□□□ -0.17
CXCL12-201ENST00000343575 C8orf4Q9NR00 106 aa13.97□□□□□ -0.17
CXCL12-201ENST00000343575 RXFP3Q9NSD7 469 aa13.97□□□□□ -0.17
CXCL12-201ENST00000343575 BLOC1S6Q9UL45 172 aa13.97□□□□□ -0.17
CXCL12-201ENST00000343575 AP4S1Q9Y587 144 aa13.97□□□□□ -0.17
CXCL12-201ENST00000343575 SPTBP11277 2137 aa13.97□□□□□ -0.17
CXCL12-201ENST00000343575 A0A087WXM4 84 aa13.96□□□□□ -0.17
CXCL12-201ENST00000343575 A0A0G2JN53 185 aa13.96□□□□□ -0.17
CXCL12-201ENST00000343575 TRIM64CA6NLI5 447 aa13.96□□□□□ -0.17
CXCL12-201ENST00000343575 H0YGG7 62 aa13.96□□□□□ -0.17
CXCL12-201ENST00000343575 LRATO95237 230 aa13.96□□□□□ -0.17
CXCL12-201ENST00000343575 PNLIPP16233 465 aa13.96□□□□□ -0.17
CXCL12-201ENST00000343575 MAPK1P28482 360 aa13.96□□□□□ -0.17
CXCL12-201ENST00000343575 PCSK6P29122 969 aa13.96□□□□□ -0.17
CXCL12-201ENST00000343575 PLA2G16P53816 162 aa13.96□□□□□ -0.17
CXCL12-201ENST00000343575 ARF3P61204 181 aaPredicted RBP13.96□□□□□ -0.17
CXCL12-201ENST00000343575 COL9A2Q14055 689 aaPredicted RBP13.96□□□□□ -0.17
CXCL12-201ENST00000343575 NR0B2Q15466 257 aa13.96□□□□□ -0.17
CXCL12-201ENST00000343575 AMZ1Q400G9 498 aa13.96□□□□□ -0.17
CXCL12-201ENST00000343575 REP15Q6BDI9 236 aa13.96□□□□□ -0.17
CXCL12-201ENST00000343575 LAIR1Q6GTX8 287 aa13.96□□□□□ -0.17
CXCL12-201ENST00000343575 ABHD17CQ6PCB6 329 aa13.96□□□□□ -0.17
CXCL12-201ENST00000343575 AMIGO2Q86SJ2 522 aa13.96□□□□□ -0.17
CXCL12-201ENST00000343575 ASPGQ86U10 573 aa13.96□□□□□ -0.17
CXCL12-201ENST00000343575 DNAJC22Q8N4W6 341 aa13.96□□□□□ -0.17
CXCL12-201ENST00000343575 EFCAB3Q8N7B9 438 aa13.96□□□□□ -0.17
CXCL12-201ENST00000343575 NT5CQ8TCD5 201 aa13.96□□□□□ -0.17
CXCL12-201ENST00000343575 ADAMTS16Q8TE57 1224 aa13.96□□□□□ -0.17
CXCL12-201ENST00000343575 TSPEARQ8WU66 669 aa13.96□□□□□ -0.17
CXCL12-201ENST00000343575 DPY30Q9C005 99 aa13.96□□□□□ -0.17
CXCL12-201ENST00000343575 ASCC3Q8N3C0 2202 aaKnown RBP13.95□□□□□ -0.18
CXCL12-201ENST00000343575 A0A1W2PP18 115 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 A0A1W2PQM1 296 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 CPED1A4D0V7 1026 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 TLCD2A6NGC4 264 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 CDX4O14627 284 aaPredicted RBP13.95□□□□□ -0.18
CXCL12-201ENST00000343575 TMPRSS11DO60235 418 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 SMIM10L1P0DMW3 83 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 ZNF12P17014 697 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 C21orf58P58505 322 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 GPLD1P80108 840 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 RHDQ02161 417 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 STX5Q13190 355 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 PWP1Q13610 501 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 TRIM25Q14258 630 aaKnown RBP13.95□□□□□ -0.18
CXCL12-201ENST00000343575 SF3A2Q15428 464 aaKnown RBP13.95□□□□□ -0.18
CXCL12-201ENST00000343575 UGT8Q16880 541 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 HKDC1Q2TB90 917 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 DEFB110Q30KQ9 67 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 ZBED5Q49AG3 693 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 PAGE3Q5JUK9 113 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 SPANXN4Q5MJ08 99 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 GALNT4Q8N4A0 578 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 ARHGEF39Q8N4T4 335 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 TBC1D19Q8N5T2 526 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 OR2L5Q8NG80 312 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 RGMAQ96B86 450 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 THAP11Q96EK4 314 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 SMIM10Q96HG1 83 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 C17orf62Q9BQA9 187 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 NUDT22Q9BRQ3 303 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms