RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 RAET1EQ8TD07 263 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 CLEC4CQ8WTT0 213 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 UBE2FQ969M7 185 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 WBP1Q96G27 269 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 HSH2DQ96JZ2 352 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 C10orf90Q96M02 699 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 SLC2A13Q96QE2 648 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 OR52E6Q96RD3 313 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 BBS4Q96RK4 519 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 SOSTQ9BQB4 213 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 SEC22CQ9BRL7 303 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 GPR63Q9BZJ6 419 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 OR51J1Q9H342 316 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 FZD8Q9H461 694 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 ZNF226Q9NYT6 803 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 TAS2R13Q9NYV9 303 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 PLEKHB1Q9UF11 243 aaPredicted RBP7.8□□□□□ -1.16
ATG4A-201ENST00000343524 EVLQ9UI08 416 aaPredicted RBP7.8□□□□□ -1.16
ATG4A-201ENST00000343524 PURGQ9UJV8 347 aaKnown RBP7.8□□□□□ -1.16
ATG4A-201ENST00000343524 LSM2Q9Y333 95 aaKnown RBP7.8□□□□□ -1.16
ATG4A-201ENST00000343524 PRUNE2Q8WUY3 3088 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 TRIP11Q15643 1979 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 LAMA2P24043 3122 aaKnown RBP7.8□□□□□ -1.16
ATG4A-201ENST00000343524 CITO14578 2027 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 LOC102723532A0A0G2JNH3 316 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 IRGMA1A4Y4 181 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 LRRC14BA6NHZ5 514 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 GFRA2O00451 464 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 MATN3O15232 486 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 PLOD3O60568 738 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 RNGTTO60942 597 aaKnown RBP7.8□□□□□ -1.16
ATG4A-201ENST00000343524 ECI2O75521 394 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 MPC2O95563 127 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 OTCP00480 354 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 S100A8P05109 93 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 S100A9P06702 114 aaKnown RBP7.8□□□□□ -1.16
ATG4A-201ENST00000343524 FHP07954 510 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 H2AFB1P0C5Y9 115 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 H2AFB2P0C5Z0 115 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 STAG3L1P0CL83 205 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 GAAP10253 952 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 VLDLRP98155 873 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 VEZF1Q14119 521 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 LGALSLQ3ZCW2 172 aaPredicted RBP7.8□□□□□ -1.16
ATG4A-201ENST00000343524 C3orf38Q5JPI3 329 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 OTUD1Q5VV17 481 aaPredicted RBP7.8□□□□□ -1.16
ATG4A-201ENST00000343524 SLC27A4Q6P1M0 643 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 C3P1Q6ZMU1 363 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 IKBIPQ70UQ0 350 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 PGAP1Q75T13 922 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 APOBEC3FQ8IUX4 373 aaKnown RBP7.8□□□□□ -1.16
ATG4A-201ENST00000343524 NAXDQ8IW45 347 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 NETO2Q8NC67 525 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 OR10G2Q8NGC3 310 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 OR6P1Q8NGX9 317 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 SPATA22Q8NHS9 363 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 CDC26Q8NHZ8 85 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 METTL6Q8TCB7 284 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 BRI3BPQ8WY22 251 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 ACOT12Q8WYK0 555 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 TCEAL3Q969E4 200 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 PGAP3Q96FM1 320 aaPredicted RBP7.8□□□□□ -1.16
ATG4A-201ENST00000343524 AARSD1Q9BTE6 412 aaKnown RBP7.8□□□□□ -1.16
ATG4A-201ENST00000343524 PDCD10Q9BUL8 212 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 ACTR6Q9GZN1 396 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 GHITMQ9H3K2 345 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 IKZF5Q9H5V7 419 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 AMBNQ9NP70 447 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 ISYNA1Q9NPH2 558 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 GKN1Q9NS71 199 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 ZNF275Q9NSD4 429 aaPredicted RBP7.8□□□□□ -1.16
ATG4A-201ENST00000343524 ABCC13Q9NSE7 274 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 TXNL4BQ9NX01 149 aaKnown RBP7.8□□□□□ -1.16
ATG4A-201ENST00000343524 NUDT4Q9NZJ9 180 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 EPHA6Q9UF33 1036 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 POMT2Q9UKY4 750 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 GINS2Q9Y248 185 aa7.8□□□□□ -1.16
ATG4A-201ENST00000343524 CFAP20Q9Y6A4 193 aaKnown RBP7.8□□□□□ -1.16
ATG4A-201ENST00000343524 KIAA1217Q5T5P2 1943 aa7.79□□□□□ -1.16
ATG4A-201ENST00000343524 IGKV6D-21A0A0A0MT36 114 aa7.79□□□□□ -1.16
ATG4A-201ENST00000343524 ARRDC5A6NEK1 342 aa7.79□□□□□ -1.16
ATG4A-201ENST00000343524 H3BM21 787 aa7.79□□□□□ -1.16
ATG4A-201ENST00000343524 J3KR12 359 aa7.79□□□□□ -1.16
ATG4A-201ENST00000343524 TNFRSF11BO00300 401 aa7.79□□□□□ -1.16
ATG4A-201ENST00000343524 SCAMP3O14828 347 aaKnown RBP7.79□□□□□ -1.16
ATG4A-201ENST00000343524 CSO75390 466 aaKnown RBP7.79□□□□□ -1.16
ATG4A-201ENST00000343524 ITGA10O75578 1167 aa7.79□□□□□ -1.16
ATG4A-201ENST00000343524 SOX30O94993 753 aa7.79□□□□□ -1.16
ATG4A-201ENST00000343524 MT-CYBP00156 380 aaPredicted RBP7.79□□□□□ -1.16
ATG4A-201ENST00000343524 CTPS1P17812 591 aa7.79□□□□□ -1.16
ATG4A-201ENST00000343524 KDELR2P33947 212 aa7.79□□□□□ -1.16
ATG4A-201ENST00000343524 GSTM5P46439 218 aa7.79□□□□□ -1.16
ATG4A-201ENST00000343524 STAT5BP51692 787 aa7.79□□□□□ -1.16
ATG4A-201ENST00000343524 RPL38P63173 70 aaKnown RBP7.79□□□□□ -1.16
ATG4A-201ENST00000343524 DHODHQ02127 395 aa7.79□□□□□ -1.16
ATG4A-201ENST00000343524 ALDH6A1Q02252 535 aaKnown RBP7.79□□□□□ -1.16
ATG4A-201ENST00000343524 VMACQ2NL98 169 aa7.79□□□□□ -1.16
ATG4A-201ENST00000343524 Q3ZCU0 254 aa7.79□□□□□ -1.16
ATG4A-201ENST00000343524 ARHGAP15Q53QZ3 475 aa7.79□□□□□ -1.16
ATG4A-201ENST00000343524 SPANXN4Q5MJ08 99 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms